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Putative Salmonella enterica subsp. enterica serovar Typhi 343077_228140 RM systems
Ref: Tanmoy,A.M.T. et al. unpublished
REBASE ref # 27692
Sequence length: | GenBank #: | |
Chromosome: | 4,790,593 bp | CP029866 |
plasmid pHCM2: | 106,706 bp | CP029867 |
REBASE acronym: Sen228140
Org_num: 31651
All begin SA228140_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5924 | endoribonuclease SymE | |||
5925 | S | S.StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | S.Sen228140ORF5925P |
??? | M | M.SenTY585ORFHP (100% identity) | GAANNNNNNNNTCGC | M.Sen228140ORF5925P |
5927 | R | StyTORF4575P (100% identity) | GAANNNNNNNNTCGC | Sen228140ORF5925P |
5928 | mrr restriction system protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1401 | bacteriophage protein | |||
1402 | M | M.StyTORF1926P (100% identity) | M.Sen228140ORF1402P | |
1403 | bacteriophage protein | |||
4365 | bacteriophage protein | |||
1395 | M | M.StyTORF1914P (100% identity) | M.Sen228140ORF1395P | |
1413 | bacteriophage protein | |||
2570 | DMT superfamily transporter inner membrane | |||
2569 | V | V.StyTDcmP (100% identity) | V.Sen228140DcmP | |
2573 | M | M.StyTDcmP (100% identity) | CCWGG | M.Sen228140DcmP |
2571 | 231 aa hypothetical protein | |||
4140 | Fis DNA-binding protein | |||
3589 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen228140ORF3589P |
4147 | 54 aa hypothetical protein | |||
161 | 75 aa hypothetical protein | |||
165 | M | M.StyTORF3409P (100% identity) | GATC | M.Sen228140ORF165P |
4305 | endonuclease | |||
5235 | cell division protein DamX | |||
5238 | M | DNA adenine methylase | GATC | M.Sen228140DamP |
5228 | ribulose-phosphate 3-epimerase | |||
6968 | replication endonuclease | |||
5642 | M | M.StyTORF4329P (100% identity) | M.Sen228140ORF5642P | |
5645 | exonuclease | |||
plasmid pHCM2 | ||||
6010 | 308 aa hypothetical protein | |||
6013 | M | M.StyCORF112P (100% identity) | M.Sen228140ORF6013P | |
7054 | 76 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
676 | metabolite transport protein | |||
684 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen228140ORF684P |
??? | R | StyTORF2507P (100% identity) | CAGAG | Sen228140ORF684P |
4354 | terminal oxidase subunit I | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5927 | subunit R of type I restriction-modification | |||
5928 | R | StyTMrrP (100% identity) | Sen228140MrrP | |
5931 | 95 aa hypothetical protein |