Lactobacillus backii TMW 1.1988 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Lactobacillus backii TMW 1.1988 RM systems
Ref: Behr,J. et al. unpublished
REBASE ref # 22728
| Sequence length: | GenBank #: | |
| Chromosome: | 2,558,858 bp | CP014623 |
| plasmid L11988-2: | 41,380 bp | CP014626 |
| plasmid L11988-3: | 18,755 bp | CP014627 |
| plasmid L11988-7: | 41,809 bp | CP014631 |
| plasmid L11988-8: | 27,021 bp | CP014632 |
REBASE acronym: Lba1988
Org_num: 19759
Last updated: 02/10/2025 09:13
All begin AYR52_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid L11988-2 | ||||
| 12235 | 374 aa hypothetical protein | |||
| 12240 | S | S.Lba2002I (67% identity) | AGGNNNNNRCT | S.Lba1988I |
| 12245 | M | M.Lba1992II (99% identity) | AGGNNNNNRCT | M.Lba1988I |
| 12060 | R | LplLP06ORFAP (99% identity) | AGGNNNNNRCT | Lba1988IP |
| 12065 | 655 aa hypothetical protein | |||
| plasmid L11988-3 | ||||
| 12340 | 72 aa hypothetical protein | |||
| 12345 | S | S.Lra4877ORF5825P (62% identity) | CGANNNNNNGAT | S.Lba1988III |
| 12350 | transcriptional regulator | |||
| plasmid L11988-7 | ||||
| 12655 | RepB-like protein | |||
| 12660 | S | restriction endonuclease subunit S | S.Lba1988ORF12660P | |
| 12665 | 60 aa hypothetical protein | |||
| 12695 | 72 aa hypothetical protein | |||
| 12700 | S | S.Lba1992ORF12250P (100% identity) | S.Lba1988ORF12700P | |
| 12705 | addiction module toxin RelE | |||
| plasmid L11988-8 | ||||
| 12890 | RepB-like protein | |||
| 12895 | S | S.LbrNSMJ23ORF12860P (46% identity) | S1.Lba1988ORF12905P | |
| 12900 | S | S.Lco3535ORF15025P (60% identity) | S2.Lba1988ORF12905P | |
| 12905 | M | M.Lce1ORFAP (99% identity) | M.Lba1988ORF12905P | |
| 12910 | 120 aa hypothetical protein | |||
| 12915 | transposase | |||
| 12920 | R | Lpa3299ORF16215P (99% identity) | CTANNNNNNTTAA | Lba1988IIP |
| 12925 | M | M.Lba1991II (99% identity) | CTANNNNNNTTAA | M.Lba1988II |
| 12930 | S | S.Lba1992II (99% identity) | CTANNNNNNTTAA | S.Lba1988II |
| 12935 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3880 | 1217 aa hypothetical protein | |||
| 3890 | RM | Lba1992ORF5140P (91% identity) | Lba1988ORF3890P | |
| 3895 | 840 aa hypothetical protein | |||