Salmonella enterica subsp. enterica serovar Agona 18.H.07 |
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Putative Salmonella enterica subsp. enterica serovar Agona 18.H.07 RM systems
Ref: Zhou,Z. et al. PLoS Genet. 9 (4), E1003471 (2013)
REBASE ref # 19162
Contig set: 4,776,251 bp
GenBank #: CASX00000000 (NZ_CASX00000000)
REBASE acronym: Sen18H07
Org_num: 16222
All begin SA18_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3674 | protein TIR | |||
| 3675 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen18H07ORF3675P |
| 3676 | M | M2.SenSA5ORF17266P (99% identity) | CCCNNNNNRTAG | M2.Sen18H07ORF3675P |
| 3677 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen18H07ORF3675P |
| 3678 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen18H07ORF3675P |
| 3679 | filamentation induced by cAMP protein Fic | |||
| 3997 | Resolvase domain-containing protein | |||
| 3998 | M | M.SenS0935ORF770P (100% identity) | M.Sen18H07ORF3998P | |
| 3999 | S | S.Sen620239ORF7013P (100% identity) | S.Sen18H07ORF3998P | |
| 4000 | R | Sen620239ORF7013P (100% identity) | Sen18H07ORF3998P | |
| 4001 | protein CiaB | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3658 | 97 aa hypothetical protein | |||
| 3659 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen18H07ORF3659P |
| 3660 | 670 aa hypothetical protein | |||
| 1634 | metal dependent phosphohydrolase | |||
| 1635 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen18H07DcmP |
| 1636 | V | V.StyUK1DcmP (100% identity) | V.Sen18H07DcmP | |
| 1637 | carboxylate/amino acid/amine transporter | |||
| 4310 | periplasmic protein | |||
| 4311 | M | DNA methylase | ATGCAT | M.Sen18H07ORF4311P |
| 4312 | DNA-binding protein Fis | |||
| 4669 | protein DamX | |||
| 4670 | M | DNA adenine methylase | GATC | M.Sen18H07DamP |
| 4671 | ribulose-phosphate 3-epimerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2934 | cyanide-insensitive oxidase CioA | |||
| 2935 | R | SenSA5ORF13013P (100% identity) | CAGAG | Sen18H07ORF2936P |
| 2936 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen18H07ORF2936P |
| 2937 | major facilitator superfamily MFS_1 | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 973 | DksA/TraR family C4-type zinc finger protein | |||
| ??? | M | M.Sen19F03ORFAP (100% identity) | GATC | M.Sen18H07ORFAP |
| 974 | bacteriophage replication gene A | |||