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Putative Gardnerella vaginalis AMD RM systems
Ref: Harwich,M.D. Jr. et al. BMC Genomics 11, 375 (2010)
REBASE ref # 13930
Contig set: 1,606,758 bp
GenBank #: ADAM00000000 (NZ_ADAM00000000)
REBASE acronym: GvaAMD
Org_num: 8483
All begin GVAMD_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
717 | 226 aa hypothetical protein | |||
718 | M | M.Gsp753ORF2195P (98% identity) | M.GvaAMDORF718P | |
719 | 261 aa hypothetical protein | |||
737 | DNA repair ATPase | |||
738 | M | M.Gva7719ORF81P (100% identity) | CCTNAGG | M.GvaAMDORF738P |
739 | R | Gva7719ORF81P (100% identity) | CCTNAGG | GvaAMDORF738P |
740 | 66 aa hypothetical protein | |||
144 | 797 aa hypothetical protein | |||
??? | RM | Gsp983ORF2715P (30% identity) | GvaAMDORF145P | |
148 | 222 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1085 | 41 aa hypothetical protein | |||
1086 | R | Efa2330ORF31420P (67% identity) | GvaAMDORF1087P | |
1087 | M | M.Efa2330ORF31420P (63% identity) | M.GvaAMDORF1087P | |
1088 | filamentation induced by cAMP protein Fic |