E. coli K-12 genome digests     average fragment lengths and their standard deviations (November 2011)    New! Restriction enzyme site distributions in the human genome (2011)    New! 6-base specificities as dipeptides here    New! Patterns in uploaded sequence data    New! Helicobacter genome digests and gene sets left intact here Insertion Sequences shotgun support data Shotgun mapping PostScript figure downloads - manuscript supporting material OpenPPI_Predictor download Yeast genome digests with prototypes Human genome's (build36) DpnII fragment length distribution data   chart Potential homing endonuclease sites in the human genome. G+C content of finished bacterial chromosomes and plasmids, 2010. Ordered G+C content of finished bacterial chromosomes and plasmids, 2010.
Finished bacterial genomes ranked by G+C content (2001). Fragmentation data - finished bacterial genomes . Restriction enzyme site frequencies across G+C-ordered complete genomes. Compare restriction site frequencies between selected organisms mammalian genomes (Human - Mouse - Rat) insect genomes (Fruit Fly - Mosquito) plant genomes (Arabidopsis - Rice) Restriction site densities deviating from expectations Human - Mouse - Rat - Fruit Fly - Mosquito - Arabidopsis - Rice - Nematode Chromosomes with deviant restriction site densities Human - Mouse - Rat - Fruit Fly - Mosquito - Arabidopsis - Rice - Nematode Human genome fragmentation data for prototype restriction enzymes, chromosome by chromosome number of restriction sites density of restriction sites (per Mbase) average fragment lengths Mouse genome fragmentation data for prototype restriction enzymes, chromosome by chromosome number of restriction sites density of restriction sites (per Mbase) average fragment lengths Rat genome fragmentation data for prototype restriction enzymes, chromosome by chromosome number of restriction sites density of restriction sites (per Mbase) average fragment lengths
SNPs and restiction enzymes TSC.100 data, 890K SNPs, ~2/3 of SNP-s discriminated, with ~2.6 coverage - sample discriminating power of enzymes ranked by discrimination/cut ratios
Data by Janos Posfai (posfai@neb.com) and Tamas Vincze (vincze@neb.com) Copyright (C) 2002 New England Biolabs, Inc. Not for redistribution.

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