| Enzyme: | AccI | Longest uncut segments |
| Specificity: | GTMKAC | Repeats in uncut segments |
| Number of sites: | 1076648 | Genes in uncut segments |
| Mean distance between sites: | 2657 base pairs | |
| Standard deviation: | 2820 base pairs | |
| Site density | 376.3 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 488368 | chr15 | NT_037852.6 | 1397253-1885621 | 0.13 % in | 5 repeats | 0.00 % in | 0 genes |
| 2 | 408531 | chr6 | NT_167244.1 | 2357950-2766481 | 0.87 % in | 14 repeats | 0.00 % in | 0 genes |
| 3 | 246045 | chr6 | NT_167244.1 | 2009166-2255211 | 0.88 % in | 11 repeats | 1.87 % in | 2 genes |
| 4 | 209860 | chr6 | NT_167244.1 | 4388426-4598286 | 0.92 % in | 7 repeats | 0.00 % in | 0 genes |
| 5 | 181153 | chr6 | NT_167244.1 | 3789514-3970667 | 0.18 % in | 3 repeats | 0.00 % in | 0 genes |
| 6 | 176547 | chr6 | NT_167244.1 | 3179727-3356274 | 0.26 % in | 6 repeats | 0.33 % in | 2 genes |
| 7 | 176146 | chr6 | NT_167247.1 | 4421558-4597704 | 1.35 % in | 9 repeats | 100.00 % in | 1 genes |
| 8 | 171011 | chr6 | NT_167249.1 | 2135079-2306090 | 2.65 % in | 19 repeats | 0.00 % in | 0 genes |
| 9 | 165572 | chr6 | NT_167247.1 | 1562164-1727736 | 0.34 % in | 6 repeats | 0.00 % in | 0 genes |
| 10 | 164661 | chr6 | NT_167248.1 | 517561-682222 | 3.25 % in | 2 repeats | 0.00 % in | 0 genes |
| 11 | 158997 | chr6 | NT_167244.1 | 2884289-3043286 | 6.76 % in | 56 repeats | 0.00 % in | 0 genes |
| 12 | 155346 | chr9 | NT_008470.19 | 21692385-21847731 | 1.40 % in | 10 repeats | 0.00 % in | 0 genes |
| 13 | 133267 | chr6 | NT_167245.1 | 2605363-2738630 | 5.74 % in | 27 repeats | 0.00 % in | 0 genes |
| 14 | 132798 | chr6 | NT_167246.1 | 3251553-3384351 | 4.35 % in | 30 repeats | 0.00 % in | 0 genes |
| 15 | 123513 | chr6 | NT_167247.1 | 1176539-1300052 | 3.90 % in | 10 repeats | 0.00 % in | 0 genes |
| 16 | 120195 | chrX | NT_011786.16 | 4269298-4389493 | 9.37 % in | 63 repeats | 0.00 % in | 0 genes |
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 488368 | chr15 | NT_037852.6 | 1397253-1885621 | 5 | 5 | MIRc (1) | MIRb (1) | L1M3 (1) | |
| 2 | 408531 | chr6 | NT_167244.1 | 2357950-2766481 | 14 | 10 | LTR84b (2) | L4 (2) | AluY (2) | |
| 3 | 246045 | chr6 | NT_167244.1 | 2009166-2255211 | 11 | 10 | MIRb (2) | MIR (1) | MER5A1 (1) | |
| 4 | 209860 | chr6 | NT_167244.1 | 4388426-4598286 | 7 | 6 | MER57-int (2) | (TTCC)n (1) | AluY (1) | |
| 5 | 181153 | chr6 | NT_167244.1 | 3789514-3970667 | 3 | 3 | MLT1H-int (1) | MER52D (1) | AluJb (1) | |
| 6 | 176547 | chr6 | NT_167244.1 | 3179727-3356274 | 6 | 4 | GC_rich (3) | Charlie4a (1) | (CCG)n (1) | |
| 7 | 176146 | chr6 | NT_167247.1 | 4421558-4597704 | 9 | 7 | MLT1J (2) | AluSx (2) | (TTAAA)n (1) | |
| 8 | 171011 | chr6 | NT_167249.1 | 2135079-2306090 | 19 | 10 | AluSx (5) | L1MB8 (3) | MLT1A (2) | |
| 9 | 165572 | chr6 | NT_167247.1 | 1562164-1727736 | 6 | 5 | MIR (2) | L1MC3 (1) | (GGAA)n (1) | |
| 10 | 164661 | chr6 | NT_167248.1 | 517561-682222 | 2 | 2 | L1PREC2 (1) | HERVH-int (1) | ||
| 11 | 158997 | chr6 | NT_167244.1 | 2884289-3043286 | 56 | 25 | L1MC5 (6) | AluY (6) | AluJo (5) | |
| 12 | 155346 | chr9 | NT_008470.19 | 21692385-21847731 | 10 | 8 | MIRb (2) | L2 (2) | MLT1A (1) | |
| 13 | 133267 | chr6 | NT_167245.1 | 2605363-2738630 | 27 | 22 | AluY (3) | Tigger1 (2) | LTR84b (2) | |
| 14 | 132798 | chr6 | NT_167246.1 | 3251553-3384351 | 30 | 18 | AluSx (5) | L1MC5 (3) | MLT1C (2) | |
| 15 | 123513 | chr6 | NT_167247.1 | 1176539-1300052 | 10 | 7 | ERV3-16A3_I-int (4) | (TATG)n (1) | (TAAA)n (1) | |
| 16 | 120195 | chrX | NT_011786.16 | 4269298-4389493 | 63 | 12 | AluSx (15) | MER33 (14) | AluSc (13) | |
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |
| 3 | 246045 | chr6 | NT_167244.1 | 2009166-2255211 | FLOT1 | flotillin-1 |
| DDR1 | epithelial_discoidin_domain-containing_receptor_1_isoform_DDR1c | |||||
| 6 | 176547 | chr6 | NT_167244.1 | 3179727-3356274 | EHMT2 | histone-lysine_N-methyltransferase,_H3_lysine-9_specific_3_isoform_b |
| TNXB | tenascin-X_isoform_1_precursor | |||||
| 7 | 176146 | chr6 | NT_167247.1 | 4421558-4597704 | LOC100507722 | hypothetical_protein_LOC100507722 |