| Enzyme: | SuaI | Longest uncut segments |
| Specificity: | GGCC | Repeats in uncut segments |
| Number of sites: | 8350301 | Genes in uncut segments |
| Mean distance between sites: | 342 base pairs | |
| Standard deviation: | 478 base pairs | |
| Site density | 2918.3 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 487930 | chr15 | NT_037852.6 | 1397711-1885641 | 0.06 % in | 4 repeats | 0.00 % in | 0 genes |
| 2 | 401264 | chr6 | NT_167244.1 | 2359970-2761234 | 0.00 % in | 1 repeats | 0.00 % in | 0 genes |
| 3 | 209576 | chr6 | NT_167244.1 | 4388350-4597926 | 0.81 % in | 6 repeats | 0.00 % in | 0 genes |
| 4 | 159314 | chr6 | NT_167248.1 | 521896-681210 | 0.00 % in | 1 repeats | 0.00 % in | 0 genes |
| 5 | 150684 | chr9 | NT_008470.19 | 21693060-21843744 | 0.18 % in | 2 repeats | 0.00 % in | 0 genes |
| 6 | 142914 | chr6 | NT_167244.1 | 2894569-3037483 | 0.06 % in | 2 repeats | 0.00 % in | 0 genes |
| 7 | 107909 | chr6 | NT_167245.1 | 138051-245960 | 0.00 % in | 1 repeats | 0.00 % in | 0 genes |
| 8 | 104920 | chr6 | NT_167244.1 | 1451577-1556497 | 0.31 % in | 2 repeats | 0.00 % in | 0 genes |
| 9 | 103039 | chr6 | NT_167244.1 | 3491062-3594101 | 0.00 % in | 1 repeats | 0.00 % in | 0 genes |
| 10 | 101780 | chr9 | NT_008470.19 | 21506738-21608518 | 1.10 % in | 6 repeats | 0.00 % in | 0 genes |
| 11 | 101317 | chr7 | NT_007933.15 | 68186605-68287922 | 0.55 % in | 1 repeats | 0.00 % in | 0 genes |
| 12 | 100616 | chr6 | NT_025741.15 | 72111287-72211903 | 0.36 % in | 2 repeats | 0.00 % in | 0 genes |
| 13 | 100318 | chr5 | NW_003315917.1 | 1145801-1246119 | 0.28 % in | 2 repeats | 0.00 % in | 0 genes |
| 14 | 100245 | chr1 | NT_167185.1 | 38191-138436 | 0.10 % in | 2 repeats | 0.00 % in | 0 genes |
| 15 | 99456 | chr6 | NT_167247.1 | 2712447-2811903 | 0.01 % in | 1 repeats | 0.00 % in | 0 genes |
| 16 | 93672 | chrY | NT_011875.12 | 8558349-8652021 | 46.56 % in | 5 repeats | 0.00 % in | 0 genes |
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 487930 | chr15 | NT_037852.6 | 1397711-1885641 | 4 | 4 | MIRc (1) | MIRb (1) | L1M3 (1) | |
| 2 | 401264 | chr6 | NT_167244.1 | 2359970-2761234 | 1 | 1 | AluSp (1) | |||
| 3 | 209576 | chr6 | NT_167244.1 | 4388350-4597926 | 6 | 5 | MER57-int (2) | (TTCC)n (1) | AluY (1) | |
| 4 | 159314 | chr6 | NT_167248.1 | 521896-681210 | 1 | 1 | HERVH-int (1) | |||
| 5 | 150684 | chr9 | NT_008470.19 | 21693060-21843744 | 2 | 2 | MIR3 (1) | L1M5 (1) | ||
| 6 | 142914 | chr6 | NT_167244.1 | 2894569-3037483 | 2 | 2 | AluY (1) | AluSg1 (1) | ||
| 7 | 107909 | chr6 | NT_167245.1 | 138051-245960 | 1 | 1 | LTR12C (1) | |||
| 8 | 104920 | chr6 | NT_167244.1 | 1451577-1556497 | 2 | 2 | ERV3-16A3_I-int (1) | AluSg1 (1) | ||
| 9 | 103039 | chr6 | NT_167244.1 | 3491062-3594101 | 1 | 1 | AluS (1) | |||
| 10 | 101780 | chr9 | NT_008470.19 | 21506738-21608518 | 6 | 6 | L2a (1) | L1ME1 (1) | Charlie4a (1) | |
| 11 | 101317 | chr7 | NT_007933.15 | 68186605-68287922 | 1 | 1 | L1PB1 (1) | |||
| 12 | 100616 | chr6 | NT_025741.15 | 72111287-72211903 | 2 | 2 | L1ME1 (1) | (CCA)n (1) | ||
| 13 | 100318 | chr5 | NW_003315917.1 | 1145801-1246119 | 2 | 1 | AluSg (2) | |||
| 14 | 100245 | chr1 | NT_167185.1 | 38191-138436 | 2 | 2 | AluY (1) | AluSg (1) | ||
| 15 | 99456 | chr6 | NT_167247.1 | 2712447-2811903 | 1 | 1 | AluJb (1) | |||
| 16 | 93672 | chrY | NT_011875.12 | 8558349-8652021 | 5 | 1 | LTR12B (5) | |||
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |