| Enzyme: | BtgZI | Longest uncut segments |
| Specificity: | GCGATG | Repeats in uncut segments |
| Number of sites: | 178001 | Genes in uncut segments |
| Mean distance between sites: | 16074 base pairs | |
| Standard deviation: | 19118 base pairs | |
| Site density | 62.2 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 522963 | chr15 | NT_037852.6 | 1369564-1892527 | 4.61 % in | 79 repeats | 0.60 % in | 1 genes |
| 2 | 414249 | chr6 | NT_167244.1 | 2357955-2772204 | 1.43 % in | 25 repeats | 0.00 % in | 0 genes |
| 3 | 365571 | chrY | NT_011875.12 | 8370275-8735846 | 81.38 % in | 118 repeats | 0.22 % in | 1 genes |
| 4 | 290891 | chr21 | NT_011512.11 | 10998484-11289375 | 47.72 % in | 489 repeats | 0.00 % in | 0 genes |
| 5 | 249665 | chr3 | NT_022459.15 | 4347843-4597508 | 48.16 % in | 415 repeats | 0.45 % in | 2 genes |
| 6 | 236262 | chr5 | NT_006713.15 | 18337710-18573972 | 48.34 % in | 371 repeats | 0.00 % in | 0 genes |
| 7 | 232928 | chr5 | NT_034772.6 | 38148614-38381542 | 63.56 % in | 349 repeats | 0.23 % in | 1 genes |
| 8 | 225883 | chr5 | NT_006576.16 | 41253622-41479505 | 43.49 % in | 313 repeats | 80.78 % in | 1 genes |
| 9 | 224349 | chr18 | NT_010859.14 | 4550683-4775032 | 62.02 % in | 319 repeats | 0.00 % in | 0 genes |
| 10 | 222916 | chr2 | NT_005403.17 | 31096243-31319159 | 56.35 % in | 338 repeats | 0.00 % in | 0 genes |
| 11 | 219924 | chr6 | NT_167244.1 | 4378766-4598690 | 2.84 % in | 21 repeats | 0.00 % in | 0 genes |
| 12 | 219677 | chr4 | NT_022778.16 | 1301507-1521184 | 52.43 % in | 341 repeats | 0.00 % in | 0 genes |
| 13 | 217669 | chr4 | NT_016354.19 | 96256616-96474285 | 54.36 % in | 342 repeats | 0.00 % in | 0 genes |
| 14 | 210075 | chr7 | NT_007933.15 | 23467701-23677776 | 53.52 % in | 335 repeats | 0.00 % in | 0 genes |
| 15 | 207640 | chr6 | NT_007592.15 | 55606653-55814293 | 43.50 % in | 334 repeats | 0.00 % in | 0 genes |
| 16 | 206338 | chr4 | NT_006238.11 | 5875097-6081435 | 50.89 % in | 351 repeats | 0.00 % in | 0 genes |
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 522963 | chr15 | NT_037852.6 | 1369564-1892527 | 79 | 43 | Tigger2 (6) | L1ME3C (6) | L1MDa (6) | |
| 2 | 414249 | chr6 | NT_167244.1 | 2357955-2772204 | 25 | 17 | L4 (3) | AluY (3) | LTR84b (2) | |
| 3 | 365571 | chrY | NT_011875.12 | 8370275-8735846 | 118 | 57 | LTR12B (17) | L1PA16 (7) | AT_rich (7) | |
| 4 | 290891 | chr21 | NT_011512.11 | 10998484-11289375 | 489 | 163 | AT_rich (52) | (TA)n (19) | L2a (18) | |
| 5 | 249665 | chr3 | NT_022459.15 | 4347843-4597508 | 415 | 143 | AT_rich (29) | L2a (27) | MIR (25) | |
| 6 | 236262 | chr5 | NT_006713.15 | 18337710-18573972 | 371 | 126 | MIRb (31) | MIR (17) | L1ME4a (14) | |
| 7 | 232928 | chr5 | NT_034772.6 | 38148614-38381542 | 349 | 134 | AT_rich (21) | MIRb (14) | AluY (14) | |
| 8 | 225883 | chr5 | NT_006576.16 | 41253622-41479505 | 313 | 123 | MIRb (23) | AT_rich (21) | L2a (19) | |
| 9 | 224349 | chr18 | NT_010859.14 | 4550683-4775032 | 319 | 125 | L2a (17) | AT_rich (14) | MIRb (11) | |
| 10 | 222916 | chr2 | NT_005403.17 | 31096243-31319159 | 338 | 143 | AT_rich (23) | MIR (16) | L2c (10) | |
| 11 | 219924 | chr6 | NT_167244.1 | 4378766-4598690 | 21 | 15 | MER57-int (3) | AluSx (3) | HUERS-P3-int (2) | |
| 12 | 219677 | chr4 | NT_022778.16 | 1301507-1521184 | 341 | 133 | AT_rich (43) | L2a (15) | AluY (9) | |
| 13 | 217669 | chr4 | NT_016354.19 | 96256616-96474285 | 342 | 135 | AT_rich (43) | (TA)n (15) | L2a (9) | |
| 14 | 210075 | chr7 | NT_007933.15 | 23467701-23677776 | 335 | 130 | AT_rich (39) | L1MA3 (12) | AluSx (11) | |
| 15 | 207640 | chr6 | NT_007592.15 | 55606653-55814293 | 334 | 131 | AT_rich (31) | L2c (15) | L2a (13) | |
| 16 | 206338 | chr4 | NT_006238.11 | 5875097-6081435 | 351 | 124 | AT_rich (37) | MIR (26) | L2a (23) | |
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |
| 1 | 522963 | chr15 | NT_037852.6 | 1369564-1892527 | LOC727914 | |
| 3 | 365571 | chrY | NT_011875.12 | 8370275-8735846 | ZNF884P | |
| 5 | 249665 | chr3 | NT_022459.15 | 4347843-4597508 | LOC100289131 | |
| LOC100419968 | ||||||
| 7 | 232928 | chr5 | NT_034772.6 | 38148614-38381542 | LOC100130265 | |
| 8 | 225883 | chr5 | NT_006576.16 | 41253622-41479505 | MIR1274A | microRNA:hsa-mir-1274a |