| Enzyme: | XveI | Longest uncut segments |
| Specificity: | CTGCAG | Repeats in uncut segments |
| Number of sites: | 1295568 | Genes in uncut segments |
| Mean distance between sites: | 2208 base pairs | |
| Standard deviation: | 2696 base pairs | |
| Site density | 452.8 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 492986 | chr15 | NT_037852.6 | 1396459-1889445 | 0.60 % in | 14 repeats | 0.00 % in | 0 genes |
| 2 | 404611 | chr6 | NT_167244.1 | 2359234-2763845 | 0.17 % in | 3 repeats | 0.00 % in | 0 genes |
| 3 | 210209 | chr6 | NT_167244.1 | 4388718-4598927 | 1.09 % in | 9 repeats | 0.00 % in | 0 genes |
| 4 | 181223 | chr6 | NT_167244.1 | 3790311-3971534 | 0.51 % in | 5 repeats | 0.00 % in | 0 genes |
| 5 | 176438 | chr6 | NT_167244.1 | 3180190-3356628 | 0.26 % in | 5 repeats | 0.27 % in | 2 genes |
| 6 | 174279 | chr6 | NT_167249.1 | 2135730-2310009 | 3.90 % in | 33 repeats | 0.00 % in | 0 genes |
| 7 | 172619 | chr6 | NT_167247.1 | 4422156-4594775 | 0.30 % in | 2 repeats | 100.00 % in | 1 genes |
| 8 | 168054 | chr6 | NT_167247.1 | 1561147-1729201 | 1.21 % in | 9 repeats | 1.07 % in | 1 genes |
| 9 | 161358 | chr6 | NT_167248.1 | 520506-681864 | 1.27 % in | 2 repeats | 0.00 % in | 0 genes |
| 10 | 158306 | chr6 | NT_167244.1 | 2007962-2166268 | 0.74 % in | 5 repeats | 0.00 % in | 0 genes |
| 11 | 152269 | chr9 | NT_008470.19 | 21692612-21844881 | 0.68 % in | 5 repeats | 0.00 % in | 0 genes |
| 12 | 144888 | chr6 | NT_167244.1 | 2892863-3037751 | 0.74 % in | 8 repeats | 0.00 % in | 0 genes |
| 13 | 120725 | chr6 | NT_167245.1 | 2603486-2724211 | 2.30 % in | 8 repeats | 0.00 % in | 0 genes |
| 14 | 116297 | chr6 | NT_167247.1 | 1176898-1293195 | 0.66 % in | 1 repeats | 0.00 % in | 0 genes |
| 15 | 114847 | chr6 | NT_167246.1 | 3259833-3374680 | 0.16 % in | 1 repeats | 0.00 % in | 0 genes |
| 16 | 113926 | chr6 | NT_167244.1 | 583907-697833 | 6.34 % in | 26 repeats | 0.00 % in | 0 genes |
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 492986 | chr15 | NT_037852.6 | 1396459-1889445 | 14 | 12 | L2a (3) | (TA)n (1) | MLT1L (1) | |
| 2 | 404611 | chr6 | NT_167244.1 | 2359234-2763845 | 3 | 3 | L4 (1) | L1MEg (1) | AluSp (1) | |
| 3 | 210209 | chr6 | NT_167244.1 | 4388718-4598927 | 9 | 7 | MER57-int (2) | AluSx (2) | (TTCC)n (1) | |
| 4 | 181223 | chr6 | NT_167244.1 | 3790311-3971534 | 5 | 5 | MLT1H-int (1) | MER52D (1) | LTR19B (1) | |
| 5 | 176438 | chr6 | NT_167244.1 | 3180190-3356628 | 5 | 5 | GC_rich (1) | Charlie4a (1) | (CCG)n (1) | |
| 6 | 174279 | chr6 | NT_167249.1 | 2135730-2310009 | 33 | 17 | Charlie2b (6) | AluSx (5) | L1MB8 (3) | |
| 7 | 172619 | chr6 | NT_167247.1 | 4422156-4594775 | 2 | 2 | MER11A (1) | AluSc (1) | ||
| 8 | 168054 | chr6 | NT_167247.1 | 1561147-1729201 | 9 | 7 | MIR (2) | L1MEe (2) | MIRc (1) | |
| 9 | 161358 | chr6 | NT_167248.1 | 520506-681864 | 2 | 2 | L1PREC2 (1) | HERVH-int (1) | ||
| 10 | 158306 | chr6 | NT_167244.1 | 2007962-2166268 | 5 | 4 | AluSx (2) | MIRb (1) | MIR (1) | |
| 11 | 152269 | chr9 | NT_008470.19 | 21692612-21844881 | 5 | 4 | L2 (2) | MIR3 (1) | LTR67B (1) | |
| 12 | 144888 | chr6 | NT_167244.1 | 2892863-3037751 | 8 | 7 | AluY (2) | (TCC)n (1) | MER21C (1) | |
| 13 | 120725 | chr6 | NT_167245.1 | 2603486-2724211 | 8 | 7 | MLT1N2 (2) | MLT1E2 (1) | MER5B (1) | |
| 14 | 116297 | chr6 | NT_167247.1 | 1176898-1293195 | 1 | 1 | ERV3-16A3_I-int (1) | |||
| 15 | 114847 | chr6 | NT_167246.1 | 3259833-3374680 | 1 | 1 | MIR3 (1) | |||
| 16 | 113926 | chr6 | NT_167244.1 | 583907-697833 | 26 | 20 | L1MA9 (3) | L1M5 (3) | L1MC5 (2) | |
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |
| 5 | 176438 | chr6 | NT_167244.1 | 3180190-3356628 | EHMT2 | histone-lysine_N-methyltransferase,_H3_lysine-9_specific_3_isoform_b |
| TNXB | tenascin-X_isoform_1_precursor | |||||
| 7 | 172619 | chr6 | NT_167247.1 | 4422156-4594775 | LOC100507722 | hypothetical_protein_LOC100507722 |
| 8 | 168054 | chr6 | NT_167247.1 | 1561147-1729201 | LOC100421582 | tripartite_motif-containing_protein_26 |