| Enzyme: | Esp3I | Longest uncut segments |
| Specificity: | CGTCTC | Repeats in uncut segments |
| Number of sites: | 641250 | Genes in uncut segments |
| Mean distance between sites: | 4462 base pairs | |
| Standard deviation: | 6371 base pairs | |
| Site density | 224.1 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 488357 | chr15 | NT_037852.6 | 1398764-1887121 | 0.04 % in | 2 repeats | 0.00 % in | 0 genes |
| 2 | 401803 | chr6 | NT_167244.1 | 2359448-2761251 | 0.08 % in | 1 repeats | 0.00 % in | 0 genes |
| 3 | 304491 | chrY | NT_011875.12 | 8417545-8722036 | 83.07 % in | 39 repeats | 0.26 % in | 1 genes |
| 4 | 218808 | chr6 | NT_167244.1 | 4389535-4608343 | 4.45 % in | 21 repeats | 0.00 % in | 0 genes |
| 5 | 209053 | chr6 | NT_167248.1 | 490594-699647 | 14.44 % in | 57 repeats | 2.08 % in | 3 genes |
| 6 | 197205 | chr6 | NT_167244.1 | 3787884-3985089 | 4.77 % in | 36 repeats | 0.00 % in | 0 genes |
| 7 | 186357 | chr6 | NT_167247.1 | 1553212-1739569 | 7.77 % in | 57 repeats | 5.23 % in | 1 genes |
| 8 | 179372 | chr6 | NT_167244.1 | 3177374-3356746 | 0.92 % in | 15 repeats | 1.90 % in | 2 genes |
| 9 | 175733 | chr6 | NT_167247.1 | 4421232-4596965 | 1.13 % in | 7 repeats | 0.00 % in | 0 genes |
| 10 | 169105 | chr6 | NT_167249.1 | 2134079-2303184 | 1.69 % in | 12 repeats | 0.00 % in | 0 genes |
| 11 | 157120 | chr6 | NT_167244.1 | 2008382-2165502 | 0.48 % in | 4 repeats | 0.00 % in | 0 genes |
| 12 | 152042 | chr9 | NT_008470.19 | 21692567-21844609 | 0.55 % in | 5 repeats | 0.00 % in | 0 genes |
| 13 | 143841 | chr6 | NT_167244.1 | 2894067-3037908 | 0.48 % in | 6 repeats | 0.00 % in | 0 genes |
| 14 | 137082 | chrX | NT_167197.1 | 19048519-19185601 | 66.41 % in | 199 repeats | 0.00 % in | 0 genes |
| 15 | 131831 | chr9 | NT_008470.19 | 34779769-34911600 | 59.11 % in | 221 repeats | 0.00 % in | 0 genes |
| 16 | 130149 | chr6 | NT_167245.1 | 2594861-2725010 | 8.46 % in | 29 repeats | 0.00 % in | 0 genes |
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 488357 | chr15 | NT_037852.6 | 1398764-1887121 | 2 | 2 | MLT1L (1) | AT_rich (1) | ||
| 2 | 401803 | chr6 | NT_167244.1 | 2359448-2761251 | 1 | 1 | AluSp (1) | |||
| 3 | 304491 | chrY | NT_011875.12 | 8417545-8722036 | 39 | 15 | LTR12B (17) | L1PA16 (6) | LTR12D (2) | |
| 4 | 218808 | chr6 | NT_167244.1 | 4389535-4608343 | 21 | 14 | HERVH-int (4) | AluSx (4) | AluSg/x (2) | |
| 5 | 209053 | chr6 | NT_167248.1 | 490594-699647 | 57 | 42 | AT_rich (8) | L1MA9 (3) | MLT1N2 (2) | |
| 6 | 197205 | chr6 | NT_167244.1 | 3787884-3985089 | 36 | 28 | L2a (6) | MLT1H-int (2) | L1M5 (2) | |
| 7 | 186357 | chr6 | NT_167247.1 | 1553212-1739569 | 57 | 37 | L1PB2 (4) | L2c (3) | L1MEf (3) | |
| 8 | 179372 | chr6 | NT_167244.1 | 3177374-3356746 | 15 | 11 | GC_rich (3) | LTR23 (2) | AluSx (2) | |
| 9 | 175733 | chr6 | NT_167247.1 | 4421232-4596965 | 7 | 7 | (TTAAA)n (1) | MLT1J (1) | MIR (1) | |
| 10 | 169105 | chr6 | NT_167249.1 | 2134079-2303184 | 12 | 9 | MLT1A (2) | AluJo (2) | AluJb (2) | |
| 11 | 157120 | chr6 | NT_167244.1 | 2008382-2165502 | 4 | 4 | MIRb (1) | MIR (1) | AluY (1) | |
| 12 | 152042 | chr9 | NT_008470.19 | 21692567-21844609 | 5 | 4 | L2 (2) | MIR3 (1) | LTR67B (1) | |
| 13 | 143841 | chr6 | NT_167244.1 | 2894067-3037908 | 6 | 6 | L1MC5 (1) | AluY (1) | AluSp (1) | |
| 14 | 137082 | chrX | NT_167197.1 | 19048519-19185601 | 199 | 97 | AT_rich (9) | MIRb (8) | L1PB4 (7) | |
| 15 | 131831 | chr9 | NT_008470.19 | 34779769-34911600 | 221 | 99 | AT_rich (22) | L1MA7 (10) | L2a (9) | |
| 16 | 130149 | chr6 | NT_167245.1 | 2594861-2725010 | 29 | 23 | MER21-int (4) | MLT1N2 (2) | MER21C (2) | |
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |
| 3 | 304491 | chrY | NT_011875.12 | 8417545-8722036 | ZNF884P | |
| 5 | 209053 | chr6 | NT_167248.1 | 490594-699647 | OR2G1P | |
| OR12D1P | ||||||
| OR11A1 | olfactory_receptor_11A1 | |||||
| 7 | 186357 | chr6 | NT_167247.1 | 1553212-1739569 | LOC100421582 | tripartite_motif-containing_protein_26 |
| 8 | 179372 | chr6 | NT_167244.1 | 3177374-3356746 | EHMT2 | histone-lysine_N-methyltransferase,_H3_lysine-9_specific_3_isoform_b |
| TNXB | tenascin-X_isoform_1_precursor | |||||