| Enzyme: | BsrBI | Longest uncut segments |
| Specificity: | CCGCTC | Repeats in uncut segments |
| Number of sites: | 228424 | Genes in uncut segments |
| Mean distance between sites: | 12526 base pairs | |
| Standard deviation: | 19735 base pairs | |
| Site density | 79.8 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 504746 | chr15 | NT_037852.6 | 1396111-1900857 | 1.19 % in | 34 repeats | 1.54 % in | 1 genes |
| 2 | 439514 | chr6 | NT_167244.1 | 2323846-2763360 | 4.43 % in | 83 repeats | 1.29 % in | 1 genes |
| 3 | 430279 | chr4 | NT_006316.16 | 12411266-12841545 | 41.90 % in | 771 repeats | 100.00 % in | 1 genes |
| 4 | 385077 | chr9 | NT_008470.19 | 34639918-35024995 | 58.61 % in | 616 repeats | 6.19 % in | 2 genes |
| 5 | 348682 | chrY | NT_011875.12 | 8386592-8735274 | 82.23 % in | 101 repeats | 0.23 % in | 1 genes |
| 6 | 313859 | chr6 | NT_167244.1 | 444785-758644 | 19.55 % in | 185 repeats | 4.71 % in | 9 genes |
| 7 | 298195 | chr1 | NT_004487.19 | 39570821-39869016 | 52.56 % in | 445 repeats | 0.21 % in | 1 genes |
| 8 | 292365 | chr6 | NT_025741.15 | 3010898-3303263 | 41.67 % in | 410 repeats | 0.00 % in | 0 genes |
| 9 | 291507 | chr6 | NT_007299.13 | 4238278-4529785 | 49.66 % in | 476 repeats | 0.00 % in | 0 genes |
| 10 | 286865 | chr10 | NT_030059.13 | 8250600-8537465 | 54.96 % in | 471 repeats | 0.00 % in | 0 genes |
| 11 | 286197 | chr13 | NT_024524.14 | 37138870-37425067 | 54.81 % in | 471 repeats | 0.00 % in | 0 genes |
| 12 | 285337 | chr6 | NT_167248.1 | 473114-758451 | 23.74 % in | 180 repeats | 0.00 % in | 0 genes |
| 13 | 285136 | chr4 | NT_016354.19 | 29083840-29368976 | 59.94 % in | 438 repeats | 0.00 % in | 0 genes |
| 14 | 283677 | chr2 | NT_005403.17 | 38299308-38582985 | 37.64 % in | 424 repeats | 0.00 % in | 0 genes |
| 15 | 282598 | chr2 | NT_005403.17 | 44046858-44329456 | 54.88 % in | 407 repeats | 0.00 % in | 0 genes |
| 16 | 282033 | chrY | NT_011875.12 | 3919423-4201456 | 58.91 % in | 404 repeats | 0.00 % in | 0 genes |
| Help | ||||||||||
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 504746 | chr15 | NT_037852.6 | 1396111-1900857 | 34 | 22 | AT_rich (5) | (TA)n (3) | L2a (3) | |
| 2 | 439514 | chr6 | NT_167244.1 | 2323846-2763360 | 83 | 41 | AluSx (8) | AluJb (7) | AluJo (6) | |
| 3 | 430279 | chr4 | NT_006316.16 | 12411266-12841545 | 771 | 187 | MIRb (70) | MIR (64) | AT_rich (47) | |
| 4 | 385077 | chr9 | NT_008470.19 | 34639918-35024995 | 616 | 192 | AT_rich (61) | (TA)n (20) | MIR (16) | |
| 5 | 348682 | chrY | NT_011875.12 | 8386592-8735274 | 101 | 45 | LTR12B (17) | L1PA16 (7) | L1ME3A (6) | |
| 6 | 313859 | chr6 | NT_167244.1 | 444785-758644 | 185 | 89 | AT_rich (18) | L1PA7 (6) | L1MEf (6) | |
| 7 | 298195 | chr1 | NT_004487.19 | 39570821-39869016 | 445 | 172 | AT_rich (59) | (TA)n (16) | L2c (12) | |
| 8 | 292365 | chr6 | NT_025741.15 | 3010898-3303263 | 410 | 143 | AT_rich (35) | MIRb (23) | L2a (17) | |
| 9 | 291507 | chr6 | NT_007299.13 | 4238278-4529785 | 476 | 160 | AT_rich (67) | MIRb (20) | MIR (17) | |
| 10 | 286865 | chr10 | NT_030059.13 | 8250600-8537465 | 471 | 171 | AT_rich (53) | L2a (17) | MIR (14) | |
| 11 | 286197 | chr13 | NT_024524.14 | 37138870-37425067 | 471 | 171 | AT_rich (65) | MIR (21) | AluSx (16) | |
| 12 | 285337 | chr6 | NT_167248.1 | 473114-758451 | 180 | 100 | AT_rich (19) | MIR (6) | L1MEf (5) | |
| 13 | 285136 | chr4 | NT_016354.19 | 29083840-29368976 | 438 | 146 | AT_rich (49) | MIR (18) | L1MA4 (13) | |
| 14 | 283677 | chr2 | NT_005403.17 | 38299308-38582985 | 424 | 146 | AT_rich (55) | MIRb (20) | L2a (15) | |
| 15 | 282598 | chr2 | NT_005403.17 | 44046858-44329456 | 407 | 161 | AT_rich (55) | (TA)n (16) | MIR (10) | |
| 16 | 282033 | chrY | NT_011875.12 | 3919423-4201456 | 404 | 150 | AT_rich (27) | AluJo (24) | AluSx (19) | |
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |
| 1 | 504746 | chr15 | NT_037852.6 | 1396111-1900857 | LOC100418897 | |
| 2 | 439514 | chr6 | NT_167244.1 | 2323846-2763360 | HCG22 | HLA_complex_group_22 |
| 3 | 430279 | chr4 | NT_006316.16 | 12411266-12841545 | NCRNA00099 | non-protein_coding_RNA_99 |
| 4 | 385077 | chr9 | NT_008470.19 | 34639918-35024995 | LOC100421294 | |
| CYLC2 | cylicin-2 | |||||
| 5 | 348682 | chrY | NT_011875.12 | 8386592-8735274 | ZNF884P | |
| 6 | 313859 | chr6 | NT_167244.1 | 444785-758644 | OR2J2 | olfactory_receptor_2J2 |
| OR2U2P | ||||||
| OR2B4P | ||||||
| OR14J1 | olfactory_receptor_14J1 | |||||
| OR11A1 | olfactory_receptor_11A1 | |||||
| OR10C1 | olfactory_receptor_10C1 | |||||
| OR2H1 | olfactory_receptor_2H1 | |||||
| MAS1LP1 | ||||||
| MAS1L | mas-related_G-protein_coupled_receptor_MRG | |||||
| 7 | 298195 | chr1 | NT_004487.19 | 39570821-39869016 | LOC100421343 | |