| Enzyme: | MunI | Longest uncut segments |
| Specificity: | CAATTG | Repeats in uncut segments |
| Number of sites: | 546791 | Genes in uncut segments |
| Mean distance between sites: | 5232 base pairs | |
| Standard deviation: | 5927 base pairs | |
| Site density | 191.1 per megabase | Help |
| Distribution of closely spaced sites |
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| Distribution of sites within 7 STD distance |
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| Longest uncut segments | ||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeat content | Gene content | ||
| 1 | 495845 | chr15 | NT_037852.6 | 1390941-1886786 | 1.05 % in | 17 repeats | 0.00 % in | 0 genes |
| 2 | 416078 | chr6 | NT_167244.1 | 2355864-2771942 | 1.78 % in | 33 repeats | 0.00 % in | 0 genes |
| 3 | 303973 | chrY | NT_011875.12 | 8414266-8718239 | 82.77 % in | 36 repeats | 0.00 % in | 0 genes |
| 4 | 274999 | chr6 | NT_167244.1 | 2000122-2275121 | 5.81 % in | 69 repeats | 6.72 % in | 4 genes |
| 5 | 247652 | chr6 | NT_167244.1 | 3179431-3427083 | 5.65 % in | 59 repeats | 5.35 % in | 2 genes |
| 6 | 215041 | chr6 | NT_167244.1 | 4389234-4604275 | 2.83 % in | 16 repeats | 0.00 % in | 0 genes |
| 7 | 205843 | chr6 | NT_167247.1 | 4419610-4625453 | 3.32 % in | 36 repeats | 98.40 % in | 2 genes |
| 8 | 193670 | chr6 | NT_167244.1 | 3783773-3977443 | 3.77 % in | 30 repeats | 1.92 % in | 1 genes |
| 9 | 171143 | chr6 | NT_167248.1 | 511928-683071 | 6.62 % in | 7 repeats | 0.00 % in | 0 genes |
| 10 | 169336 | chr6 | NT_167249.1 | 2136169-2305505 | 1.96 % in | 14 repeats | 0.00 % in | 0 genes |
| 11 | 167945 | chr6 | NT_167247.1 | 1558888-1726833 | 1.38 % in | 11 repeats | 0.00 % in | 0 genes |
| 12 | 162970 | chr4 | NT_006316.16 | 391246-554216 | 3.58 % in | 55 repeats | 0.00 % in | 0 genes |
| 13 | 154870 | chr9 | NT_008470.19 | 21689371-21844241 | 2.01 % in | 9 repeats | 0.00 % in | 0 genes |
| 14 | 151956 | chr16 | NT_010393.16 | 598833-750789 | 21.20 % in | 173 repeats | 0.00 % in | 0 genes |
| 15 | 151398 | chr4 | NT_037622.5 | 924458-1075856 | 29.75 % in | 216 repeats | 0.00 % in | 0 genes |
| 16 | 148289 | chr9 | NT_024000.16 | 561787-710076 | 29.94 % in | 217 repeats | 0.00 % in | 0 genes |
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| Repeats in longest uncut segments | ||||||||||
| # | Length | Chr | Scaffold | Coordinates | Repeats | |||||
| Total | Distinct | Most | Second | Third | ||||||
| 1 | 495845 | chr15 | NT_037852.6 | 1390941-1886786 | 17 | 12 | L1MDa (6) | MIRc (1) | MIRb (1) | |
| 2 | 416078 | chr6 | NT_167244.1 | 2355864-2771942 | 33 | 20 | L4 (3) | AluY (3) | AluJb (3) | |
| 3 | 303973 | chrY | NT_011875.12 | 8414266-8718239 | 36 | 12 | LTR12B (17) | L1PA16 (4) | L1PA7 (3) | |
| 4 | 274999 | chr6 | NT_167244.1 | 2000122-2275121 | 69 | 39 | AluSx (9) | MIR (5) | MIRb (3) | |
| 5 | 247652 | chr6 | NT_167244.1 | 3179431-3427083 | 59 | 23 | AluSx (10) | MIR (4) | L2a (4) | |
| 6 | 215041 | chr6 | NT_167244.1 | 4389234-4604275 | 16 | 11 | HERVH-int (3) | MER57-int (2) | AluSx (2) | |
| 7 | 205843 | chr6 | NT_167247.1 | 4419610-4625453 | 36 | 25 | AluSx (5) | MLT1J (2) | MIR (2) | |
| 8 | 193670 | chr6 | NT_167244.1 | 3783773-3977443 | 30 | 21 | L2a (6) | MLT1H-int (2) | AT_rich (2) | |
| 9 | 171143 | chr6 | NT_167248.1 | 511928-683071 | 7 | 7 | LTR7 (1) | L1PREC2 (1) | L1PA7 (1) | |
| 10 | 169336 | chr6 | NT_167249.1 | 2136169-2305505 | 14 | 9 | AluSx (4) | L1MB8 (3) | MLT1A (1) | |
| 11 | 167945 | chr6 | NT_167247.1 | 1558888-1726833 | 11 | 9 | Tigger7 (2) | MSTD (2) | MIRc (1) | |
| 12 | 162970 | chr4 | NT_006316.16 | 391246-554216 | 55 | 4 | (CA)n (46) | L1M4 (7) | MER5B (1) | |
| 13 | 154870 | chr9 | NT_008470.19 | 21689371-21844241 | 9 | 7 | LTR67B (2) | L1M4b (2) | MSTA (1) | |
| 14 | 151956 | chr16 | NT_010393.16 | 598833-750789 | 173 | 57 | AluSx (20) | AluY (17) | GC_rich (15) | |
| 15 | 151398 | chr4 | NT_037622.5 | 924458-1075856 | 216 | 81 | L1MEc (14) | AluSx (14) | AluJb (11) | |
| 16 | 148289 | chr9 | NT_024000.16 | 561787-710076 | 217 | 76 | AluSx (26) | AluY (17) | AluJb (17) | |
| Help | ||||||
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| Genes in longest uncut segments | ||||||
| Sgmnt | Length (bp) | Chr | Scaffold | Coordinates | Gene symbol | Gene function |
| 4 | 274999 | chr6 | NT_167244.1 | 2000122-2275121 | LOC100294090 | hypothetical_LOC100294090,_transcript_variant_1 |
| FLOT1 | flotillin-1 | |||||
| DDR1 | epithelial_discoidin_domain-containing_receptor_1_isoform_DDR1c | |||||
| MUC21 | mucin-21_precursor | |||||
| 5 | 247652 | chr6 | NT_167244.1 | 3179431-3427083 | EHMT2 | histone-lysine_N-methyltransferase,_H3_lysine-9_specific_3_isoform_b |
| TNXB | tenascin-X_isoform_1_precursor | |||||
| 7 | 205843 | chr6 | NT_167247.1 | 4419610-4625453 | LOC100507722 | hypothetical_protein_LOC100507722 |
| COL11A2 | collagen_alpha-2(XI)_chain_isoform_4_precursor | |||||
| 8 | 193670 | chr6 | NT_167244.1 | 3783773-3977443 | HLA-DRB3 | major_histocompatibility_complex,_class_II,_DR_beta_3_precursor |