# Tetraodon nigroviridis genome, 33.919 Mbp of sequence in 27918 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 21877 644.98 1550 Acc65I GGTACC 9412 277.48 3603 AccI GTMKAC 29226 861.64 1160 AciI CCGC 587728 17327.36 57 AclI AACGTT 6827 201.27 4968 AcuI CTGAAG 96779 2853.23 350 AfeI AGCGCT 21690 639.46 1563 AflII CTTAAG 2849 83.99 11905 AflIII ACRYGT 44878 1323.09 755 AgeI ACCGGT 7461 219.96 4546 AluI AGCT 419872 12378.64 80 AlwI GGATC 142793 4209.82 237 ApaI GGGCCC 23686 698.31 1432 ApaLI GTGCAC 18191 536.31 1864 ApeKI GCWGC 409084 12060.59 82 ApoI RAATTY 32613 961.49 1040 AscI GGCGCGCC 521 15.36 65103 AseI ATTAAT 3109 91.66 10909 AsiSI GCGATCGC 207 6.10 163860 AvaI CYCGRG 60389 1780.39 561 AvaII GGWCC 198477 5851.49 170 AvrII CCTAGG 1504 44.34 22552 BaeGI GKGCMC 71396 2104.89 475 BamHI GGATCC 20616 607.80 1645 BanI GGYRCC 76323 2250.15 444 BanII GRGCYC 114162 3365.72 297 BbvI GCAGC 409084 12060.59 82 BccI CCATC 228968 6750.42 148 BceAI ACGGC 162082 4778.49 209 BciVI GTATCC 15438 455.14 2197 BclI TGATCA 18823 554.94 1802 BcoDI GTCTC 167944 4951.32 201 BfuAI ACCTGC 80623 2376.92 420 BfuCI GATC 250657 7389.86 135 BglII AGATCT 20327 599.28 1668 BlpI GCTNAGC 28951 853.53 1171 BmrI ACTGGG 45182 1332.05 750 BmtI GCTAGC 5584 164.63 6074 BpmI CTGGAG 161076 4748.83 210 BpuEI CTTGAG 29161 859.72 1163 BsaAI YACGTR 34705 1023.17 977 BsaHI GRCGYC 100418 2960.52 337 BsaI GGTCTC 44531 1312.86 761 BsaWI WCCGGW 47081 1388.04 720 BseRI GAGGAG 179190 5282.87 189 BsgI GTGCAG 70451 2077.03 481 BsiEI CGRYCG 44779 1320.17 757 BsiHKAI GWGCWC 103134 3040.59 328 BsiWI CGTACG 6160 181.61 5506 BsmAI GTCTC 167944 4951.32 201 BsmBI CGTCTC 49624 1463.01 683 BsmFI GGGAC 165876 4890.35 204 BsmI GAATGC 18139 534.77 1869 BsoBI CYCGRG 60389 1780.39 561 Bsp1286I GDGCHC 210406 6203.18 161 BspCNI CTCAG 237009 6987.49 143 BspDI ATCGAT 6778 199.83 5004 BspEI TCCGGA 16381 482.94 2070 BspHI TCATGA 16272 479.73 2084 BspMI ACCTGC 80623 2376.92 420 BspQI GCTCTTC 25685 757.24 1320 BsrBI CCGCTC 51276 1511.72 661 BsrFI RCCGGY 67782 1998.35 500 BsrGI TGTACA 15100 445.18 2246 BsrI ACTGG 186736 5505.34 181 BssHII GCGCGC 10988 323.95 3086 BssSI CACGAG 24898 734.04 1362 BstBI TTCGAA 4417 130.22 7679 BstEII GGTNACC 20756 611.93 1634 BstNI CCWGG 379349 11183.95 89 BstUI CGCG 129886 3829.29 261 BstYI RGATCY 86531 2551.10 391 BstZ17I GTATAC 1776 52.36 19098 Bsu36I CCTNAGG 24036 708.63 1411 BtgI CCRYGG 94207 2777.41 360 BtgZI GCGATG 33738 994.66 1005 BtsCI GGATG 206286 6081.71 164 ClaI ATCGAT 6778 199.83 5004 CviAII CATG 281977 8313.23 120 CviKI-1 RGCY 1564207 46115.87 21 CviQI GTAC 161082 4749.01 210 DdeI CTNAG 262320 7733.70 129 DpnII GATC 250657 7389.86 135 DraI TTTAAA 9685 285.53 3502 EaeI YGGCCR 120156 3542.43 282 EagI CGGCCG 22599 666.26 1500 EarI CTCTTC 85517 2521.21 396 EciI GGCGGA 53503 1577.37 633 Eco53kI GAGCTC 36409 1073.41 931 EcoO109I RGGNCCY 98400 2901.02 344 EcoRI GAATTC 8856 261.09 3830 EcoRV GATATC 7823 230.64 4335 FatI CATG 281977 8313.23 120 FauI CCCGC 138621 4086.82 244 Fnu4HI GCNGC 591607 17441.73 57 FokI GGATG 206286 6081.71 164 FseI GGCCGGCC 1097 32.34 30919 FspI TGCGCA 11258 331.91 3012 HaeII RGCGCY 99301 2927.59 341 HaeIII GGCC 442334 13040.87 76 HgaI GACGC 143715 4237.00 236 HhaI GCGC 243421 7176.52 139 HincII GTYRAC 46774 1378.99 725 HindIII AAGCTT 11082 326.72 3060 HinfI GANTC 210466 6204.95 161 HinP1I GCGC 243421 7176.52 139 HpaI GTTAAC 4045 119.25 8385 HpaII CCGG 281990 8313.61 120 HphI GGTGA 209079 6164.06 162 Hpy188I TCNGA 289340 8530.31 117 Hpy99I CGWCG 101954 3005.80 332 HpyAV CCTTC 248445 7324.64 136 HpyCH4III ACNGT 201520 5941.20 168 HpyCH4IV ACGT 178853 5272.93 189 HpyCH4V TGCA 340545 10039.93 99 KasI GGCGCC 26217 772.93 1293 KpnI GGTACC 9412 277.48 3603 MboI GATC 250657 7389.86 135 MboII GAAGA 282675 8333.81 119 MfeI CAATTG 2889 85.17 11740 MluCI AATT 78024 2300.30 434 MluI ACGCGT 6056 178.54 5600 MlyI GAGTC 134964 3979.00 251 MmeI TCCRAC 75087 2213.71 451 MnlI CCTC 1071350 31585.48 31 MscI TGGCCA 41235 1215.69 822 MseI TTAA 79675 2348.97 425 MspA1I CMGCKG 168348 4963.23 201 MspI CCGG 281990 8313.61 120 NaeI GCCGGC 27966 824.49 1212 NarI GGCGCC 26217 772.93 1293 NciI CCSGG 154939 4567.90 218 NcoI CCATGG 26878 792.42 1261 NdeI CATATG 4751 140.07 7139 NgoMIV GCCGGC 27966 824.49 1212 NheI GCTAGC 5584 164.63 6074 NlaIII CATG 281977 8313.23 120 NmeAIII GCCGAG 51481 1517.76 658 NotI GCGGCCGC 1269 37.41 26728 NruI TCGCGA 2481 73.14 13671 NsiI ATGCAT 5864 172.88 5784 NspI RCATGY 54224 1598.63 625 PacI TTAATTAA 41 1.21 827294 PaeR7I CTCGAG 7111 209.65 4769 PciI ACATGT 14981 441.67 2264 PleI GAGTC 134964 3979.00 251 PluTI GGCGCC 26217 772.93 1293 PmeI GTTTAAAC 192 5.66 176661 PmlI CACGTG 16281 480.00 2083 PpuMI RGGWCCY 51937 1531.20 653 PsiI TTATAA 3290 97.00 10309 PspGI CCWGG 379349 11183.95 89 PspOMI GGGCCC 23686 698.31 1432 PspXI VCTCGAGB 2307 68.01 14702 PstI CTGCAG 91561 2699.40 370 PvuI CGATCG 4564 134.56 7431 PvuII CAGCTG 79246 2336.33 428 RsaI GTAC 161082 4749.01 210 RsrII CGGWCCG 5277 155.58 6427 SacI GAGCTC 36409 1073.41 931 SacII CCGCGG 15202 448.18 2231 SalI GTCGAC 8497 250.51 3991 SapI GCTCTTC 25685 757.24 1320 Sau3AI GATC 250657 7389.86 135 Sau96I GGNCC 400211 11799.00 84 SbfI CCTGCAGG 4707 138.77 7206 ScaI AGTACT 10183 300.21 3330 ScrFI CCNGG 534288 15751.85 63 SexAI ACCWGGT 19493 574.69 1740 SfaNI GCATC 153757 4533.06 220 SfcI CTRYAG 126737 3736.45 267 SfoI GGCGCC 26217 772.93 1293 SgrAI CRCCGGYG 3835 113.06 8844 SmaI CCCGGG 19230 566.94 1763 SmlI CTYRAG 39121 1153.36 867 SnaBI TACGTA 1651 48.67 20544 SpeI ACTAGT 1504 44.34 22552 SphI GCATGC 11744 346.24 2888 SrfI GCCCGGGC 751 22.14 45165 SspI AATATT 6327 186.53 5361 StuI AGGCCT 27273 804.06 1243 StyD4I CCNGG 534288 15751.85 63 StyI CCWWGG 70234 2070.63 482 SwaI ATTTAAAT 138 4.07 245790 TaqI TCGA 131236 3869.09 258 TfiI GAWTC 75502 2225.95 449 TseI GCWGC 409084 12060.59 82 Tsp45I GTSAC 131812 3886.07 257 TspMI CCCGGG 19230 566.94 1763 TspRI CASTG 173793 5123.76 195 XbaI TCTAGA 3787 111.65 8956 XhoI CTCGAG 7111 209.65 4769 XmaI CCCGGG 19230 566.94 1763 ZraI GACGTC 21877 644.98 1550