# Sinocyclocheilus grahami genome, 1750.271 Mbp of sequence in 31276 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 274742 156.97 6370 Acc65I GGTACC 165292 94.44 10588 AccI GTMKAC 1351195 771.99 1295 AciI CCGC 6168002 3524.03 283 AclI AACGTT 558179 318.91 3135 AcuI CTGAAG 2561593 1463.54 683 AfeI AGCGCT 441545 252.27 3963 AflII CTTAAG 585636 334.60 2988 AflIII ACRYGT 2355161 1345.60 743 AgeI ACCGGT 204922 117.08 8541 AluI AGCT 12094568 6910.11 144 AlwI GGATC 2997901 1712.82 583 ApaI GGGCCC 213414 121.93 8201 ApaLI GTGCAC 668157 381.74 2619 ApeKI GCWGC 6004828 3430.80 291 ApoI RAATTY 5956808 3403.36 293 AscI GGCGCGCC 2378 1.36 736026 AseI ATTAAT 2825300 1614.21 619 AsiSI GCGATCGC 3533 2.02 495406 AvaI CYCGRG 728583 416.27 2402 AvaII GGWCC 2243666 1281.90 780 AvrII CCTAGG 163707 93.53 10691 BaeGI GKGCMC 1451272 829.17 1206 BamHI GGATCC 321288 183.56 5447 BanI GGYRCC 919861 525.55 1902 BanII GRGCYC 1464375 836.66 1195 BbvI GCAGC 6004828 3430.80 291 BccI CCATC 4917558 2809.60 355 BceAI ACGGC 1843765 1053.42 949 BciVI GTATCC 549380 313.88 3185 BclI TGATCA 1151958 658.16 1519 BcoDI GTCTC 4718022 2695.59 370 BfuAI ACCTGC 1263688 722.00 1385 BfuCI GATC 7626539 4357.35 229 BglII AGATCT 790524 451.66 2214 BlpI GCTNAGC 451019 257.69 3880 BmrI ACTGGG 923992 527.91 1894 BmtI GCTAGC 257044 146.86 6809 BpmI CTGGAG 1853340 1058.89 944 BpuEI CTTGAG 1386293 792.04 1262 BsaAI YACGTR 1041497 595.05 1680 BsaHI GRCGYC 700438 400.19 2498 BsaI GGTCTC 804006 459.36 2176 BsaWI WCCGGW 747698 427.19 2340 BseRI GAGGAG 1778457 1016.10 984 BsgI GTGCAG 1743252 995.99 1004 BsiEI CGRYCG 453418 259.06 3860 BsiHKAI GWGCWC 2475562 1414.39 707 BsiWI CGTACG 73839 42.19 23703 BsmAI GTCTC 4718022 2695.59 370 BsmBI CGTCTC 744198 425.19 2351 BsmFI GGGAC 2453244 1401.64 713 BsmI GAATGC 1464623 836.80 1195 BsoBI CYCGRG 728583 416.27 2402 Bsp1286I GDGCHC 3907962 2232.78 447 BspCNI CTCAG 6316282 3608.74 277 BspDI ATCGAT 339483 193.96 5155 BspEI TCCGGA 162882 93.06 10745 BspHI TCATGA 1128830 644.95 1550 BspMI ACCTGC 1263688 722.00 1385 BspQI GCTCTTC 376718 215.23 4646 BsrBI CCGCTC 546481 312.23 3202 BsrFI RCCGGY 750282 428.67 2332 BsrGI TGTACA 1387375 792.66 1261 BsrI ACTGG 5216173 2980.21 335 BssHII GCGCGC 147462 84.25 11869 BssSI CACGAG 553633 316.31 3161 BstBI TTCGAA 311716 178.10 5614 BstEII GGTNACC 341047 194.85 5132 BstNI CCWGG 3656743 2089.24 478 BstUI CGCG 1853146 1058.78 944 BstYI RGATCY 2009921 1148.35 870 BstZ17I GTATAC 479988 274.24 3646 Bsu36I CCTNAGG 418548 239.13 4181 BtgI CCRYGG 1064871 608.40 1643 BtgZI GCGATG 491477 280.80 3561 BtsCI GGATG 4926050 2814.45 355 ClaI ATCGAT 339483 193.96 5155 CviAII CATG 14650198 8370.24 119 CviKI-1 RGCY 32357821 18487.32 54 CviQI GTAC 6765899 3865.63 258 DdeI CTNAG 9223555 5269.79 189 DpnII GATC 7626539 4357.35 229 DraI TTTAAA 5167905 2952.63 338 EaeI YGGCCR 1402221 801.14 1248 EagI CGGCCG 141134 80.64 12401 EarI CTCTTC 1793940 1024.95 975 EciI GGCGGA 433268 247.54 4039 Eco53kI GAGCTC 601676 343.76 2908 EcoO109I RGGNCCY 1091783 623.78 1603 EcoRI GAATTC 628406 359.03 2785 EcoRV GATATC 509933 291.35 3432 FatI CATG 14650198 8370.24 119 FauI CCCGC 1313811 750.63 1332 Fnu4HI GCNGC 7521883 4297.55 232 FokI GGATG 4926050 2814.45 355 FseI GGCCGGCC 5297 3.03 330426 FspI TGCGCA 351912 201.06 4973 HaeII RGCGCY 1018994 582.19 1717 HaeIII GGCC 5369104 3067.58 325 HgaI GACGC 1667731 952.84 1049 HhaI GCGC 3389281 1936.43 516 HincII GTYRAC 1829256 1045.13 956 HindIII AAGCTT 939398 536.72 1863 HinfI GANTC 8352520 4772.13 209 HinP1I GCGC 3389281 1936.43 516 HpaI GTTAAC 630673 360.33 2775 HpaII CCGG 2654643 1516.70 659 HphI GGTGA 4832994 2761.28 362 Hpy188I TCNGA 11479277 6558.57 152 Hpy99I CGWCG 800266 457.22 2187 HpyAV CCTTC 4548716 2598.86 384 HpyCH4III ACNGT 12380437 7073.44 141 HpyCH4IV ACGT 5049091 2884.75 346 HpyCH4V TGCA 18838254 10763.05 92 KasI GGCGCC 136128 77.78 12857 KpnI GGTACC 165292 94.44 10588 MboI GATC 7626539 4357.35 229 MboII GAAGA 7415866 4236.98 236 MfeI CAATTG 678591 387.71 2579 MluCI AATT 25249305 14425.94 69 MluI ACGCGT 144807 82.73 12086 MlyI GAGTC 3607103 2060.88 485 MmeI TCCRAC 1365848 780.36 1281 MnlI CCTC 17399797 9941.20 100 MscI TGGCCA 756806 432.39 2312 MseI TTAA 28528377 16299.40 61 MspA1I CMGCKG 2154971 1231.22 812 MspI CCGG 2654643 1516.70 659 NaeI GCCGGC 184127 105.20 9505 NarI GGCGCC 136128 77.78 12857 NciI CCSGG 1167085 666.80 1499 NcoI CCATGG 545789 311.83 3206 NdeI CATATG 1056663 603.71 1656 NgoMIV GCCGGC 184127 105.20 9505 NheI GCTAGC 257044 146.86 6809 NlaIII CATG 14650198 8370.24 119 NmeAIII GCCGAG 419672 239.78 4170 NotI GCGGCCGC 4949 2.83 353661 NruI TCGCGA 117966 67.40 14837 NsiI ATGCAT 1944473 1110.96 900 NspI RCATGY 4361577 2491.94 401 PacI TTAATTAA 179869 102.77 9730 PaeR7I CTCGAG 224666 128.36 7790 PciI ACATGT 1421204 811.99 1231 PleI GAGTC 3607103 2060.88 485 PluTI GGCGCC 136128 77.78 12857 PmeI GTTTAAAC 51639 29.50 33894 PmlI CACGTG 351499 200.83 4979 PpuMI RGGWCCY 582126 332.59 3006 PsiI TTATAA 2333708 1333.34 749 PspGI CCWGG 3656743 2089.24 478 PspOMI GGGCCC 213414 121.93 8201 PspXI VCTCGAGB 59856 34.20 29241 PstI CTGCAG 1355503 774.45 1291 PvuI CGATCG 121296 69.30 14429 PvuII CAGCTG 1328063 758.78 1317 RsaI GTAC 6765899 3865.63 258 RsrII CGGWCCG 47956 27.40 36497 SacI GAGCTC 601676 343.76 2908 SacII CCGCGG 103436 59.10 16921 SalI GTCGAC 152463 87.11 11479 SapI GCTCTTC 376718 215.23 4646 Sau3AI GATC 7626539 4357.35 229 Sau96I GGNCC 4292405 2452.42 407 SbfI CCTGCAGG 30551 17.46 57290 ScaI AGTACT 622918 355.90 2809 ScrFI CCNGG 4823828 2756.05 362 SexAI ACCWGGT 228702 130.67 7653 SfaNI GCATC 5082100 2903.61 344 SfcI CTRYAG 3439054 1964.87 508 SfoI GGCGCC 136128 77.78 12857 SgrAI CRCCGGYG 22662 12.95 77233 SmaI CCCGGG 151698 86.67 11537 SmlI CTYRAG 2196595 1255.00 796 SnaBI TACGTA 230384 131.63 7597 SpeI ACTAGT 537137 306.89 3258 SphI GCATGC 734842 419.84 2381 SrfI GCCCGGGC 3874 2.21 451799 SspI AATATT 3672535 2098.27 476 StuI AGGCCT 581145 332.03 3011 StyD4I CCNGG 4823828 2756.05 362 StyI CCWWGG 1483237 847.43 1180 SwaI ATTTAAAT 240224 137.25 7285 TaqI TCGA 3486200 1991.81 502 TfiI GAWTC 4745417 2711.25 368 TseI GCWGC 6004828 3430.80 291 Tsp45I GTSAC 5287215 3020.80 331 TspMI CCCGGG 151698 86.67 11537 TspRI CASTG 9209653 5261.84 190 XbaI TCTAGA 541982 309.66 3229 XhoI CTCGAG 224666 128.36 7790 XmaI CCCGGG 151698 86.67 11537 ZraI GACGTC 274742 156.97 6370