# Sinocyclocheilus anshuiensis genome, 1632.702 Mbp of sequence in 85681 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 272736 167.05 5986 Acc65I GGTACC 174900 107.12 9335 AccI GTMKAC 1276214 781.66 1279 AciI CCGC 5918937 3625.24 275 AclI AACGTT 544183 333.30 3000 AcuI CTGAAG 2429051 1487.75 672 AfeI AGCGCT 429555 263.09 3800 AflII CTTAAG 581340 356.06 2808 AflIII ACRYGT 2248422 1377.12 726 AgeI ACCGGT 200042 122.52 8161 AluI AGCT 11562551 7081.85 141 AlwI GGATC 2814380 1723.76 580 ApaI GGGCCC 205443 125.83 7947 ApaLI GTGCAC 630115 385.93 2591 ApeKI GCWGC 5788047 3545.07 282 ApoI RAATTY 5846394 3580.81 279 AscI GGCGCGCC 2333 1.43 699829 AseI ATTAAT 2811990 1722.29 580 AsiSI GCGATCGC 3673 2.25 444514 AvaI CYCGRG 682680 418.13 2391 AvaII GGWCC 2105294 1289.45 775 AvrII CCTAGG 149175 91.37 10944 BaeGI GKGCMC 1376720 843.22 1185 BamHI GGATCC 302214 185.10 5402 BanI GGYRCC 892548 546.67 1829 BanII GRGCYC 1400588 857.83 1165 BbvI GCAGC 5788047 3545.07 282 BccI CCATC 4719425 2890.56 345 BceAI ACGGC 1751206 1072.58 932 BciVI GTATCC 523964 320.92 3116 BclI TGATCA 1097728 672.34 1487 BcoDI GTCTC 4484141 2746.45 364 BfuAI ACCTGC 1219705 747.05 1338 BfuCI GATC 7222971 4423.94 226 BglII AGATCT 757308 463.84 2155 BlpI GCTNAGC 434259 265.98 3759 BmrI ACTGGG 884781 541.91 1845 BmtI GCTAGC 245129 150.14 6660 BpmI CTGGAG 1781950 1091.41 916 BpuEI CTTGAG 1325687 811.96 1231 BsaAI YACGTR 1005437 615.81 1623 BsaHI GRCGYC 684422 419.20 2385 BsaI GGTCTC 757198 463.77 2156 BsaWI WCCGGW 709009 434.26 2302 BseRI GAGGAG 1700603 1041.59 960 BsgI GTGCAG 1673474 1024.97 975 BsiEI CGRYCG 425356 260.52 3838 BsiHKAI GWGCWC 2351321 1440.14 694 BsiWI CGTACG 75520 46.25 21619 BsmAI GTCTC 4484141 2746.45 364 BsmBI CGTCTC 699592 428.49 2333 BsmFI GGGAC 2309903 1414.77 706 BsmI GAATGC 1397098 855.70 1168 BsoBI CYCGRG 682680 418.13 2391 Bsp1286I GDGCHC 3714395 2275.00 439 BspCNI CTCAG 6088185 3728.90 268 BspDI ATCGAT 333005 203.96 4902 BspEI TCCGGA 149880 91.80 10893 BspHI TCATGA 1084002 663.93 1506 BspMI ACCTGC 1219705 747.05 1338 BspQI GCTCTTC 352719 216.03 4628 BsrBI CCGCTC 522031 319.73 3127 BsrFI RCCGGY 709452 434.53 2301 BsrGI TGTACA 1315356 805.63 1241 BsrI ACTGG 5030663 3081.19 324 BssHII GCGCGC 148343 90.86 11006 BssSI CACGAG 525148 321.64 3109 BstBI TTCGAA 307754 188.49 5305 BstEII GGTNACC 323466 198.12 5047 BstNI CCWGG 3462751 2120.87 471 BstUI CGCG 1836749 1124.98 888 BstYI RGATCY 1909925 1169.79 854 BstZ17I GTATAC 452706 277.27 3606 Bsu36I CCTNAGG 399741 244.83 4084 BtgI CCRYGG 1026954 628.99 1589 BtgZI GCGATG 466653 285.82 3498 BtsCI GGATG 4724555 2893.70 345 ClaI ATCGAT 333005 203.96 4902 CviAII CATG 14099922 8635.95 115 CviKI-1 RGCY 30862231 18902.55 52 CviQI GTAC 6575067 4027.11 248 DdeI CTNAG 8856338 5424.35 184 DpnII GATC 7222971 4423.94 226 DraI TTTAAA 5020707 3075.09 325 EaeI YGGCCR 1292664 791.73 1263 EagI CGGCCG 131342 80.44 12430 EarI CTCTTC 1717928 1052.20 950 EciI GGCGGA 420274 257.41 3884 Eco53kI GAGCTC 578676 354.43 2821 EcoO109I RGGNCCY 1020274 624.90 1600 EcoRI GAATTC 609527 373.32 2678 EcoRV GATATC 472579 289.45 3454 FatI CATG 14099922 8635.95 115 FauI CCCGC 1264202 774.30 1291 Fnu4HI GCNGC 7237169 4432.63 225 FokI GGATG 4724555 2893.70 345 FseI GGCCGGCC 4661 2.85 350289 FspI TGCGCA 347483 212.83 4698 HaeII RGCGCY 995802 609.91 1639 HaeIII GGCC 5066933 3103.40 322 HgaI GACGC 1607230 984.40 1015 HhaI GCGC 3312585 2028.90 492 HincII GTYRAC 1767098 1082.32 923 HindIII AAGCTT 898413 550.26 1817 HinfI GANTC 8013158 4907.91 203 HinP1I GCGC 3312585 2028.90 492 HpaI GTTAAC 620014 379.75 2633 HpaII CCGG 2462083 1507.98 663 HphI GGTGA 4686200 2870.21 348 Hpy188I TCNGA 11038461 6760.86 147 Hpy99I CGWCG 763952 467.91 2137 HpyAV CCTTC 4292548 2629.11 380 HpyCH4III ACNGT 11939607 7312.79 136 HpyCH4IV ACGT 4902644 3002.78 333 HpyCH4V TGCA 18016783 11034.95 90 KasI GGCGCC 132180 80.96 12352 KpnI GGTACC 174900 107.12 9335 MboI GATC 7222971 4423.94 226 MboII GAAGA 7085674 4339.85 230 MfeI CAATTG 634556 388.65 2572 MluCI AATT 24815009 15198.74 65 MluI ACGCGT 135453 82.96 12053 MlyI GAGTC 3410522 2088.88 478 MmeI TCCRAC 1315316 805.61 1241 MnlI CCTC 16489458 10099.49 99 MscI TGGCCA 702613 430.34 2323 MseI TTAA 27933080 17108.50 58 MspA1I CMGCKG 2059247 1261.25 792 MspI CCGG 2462083 1507.98 663 NaeI GCCGGC 162501 99.53 10047 NarI GGCGCC 132180 80.96 12352 NciI CCSGG 1069291 654.92 1526 NcoI CCATGG 528986 323.99 3086 NdeI CATATG 1035173 634.02 1577 NgoMIV GCCGGC 162501 99.53 10047 NheI GCTAGC 245129 150.14 6660 NlaIII CATG 14099922 8635.95 115 NmeAIII GCCGAG 396035 242.56 4122 NotI GCGGCCGC 4983 3.05 327654 NruI TCGCGA 119948 73.47 13611 NsiI ATGCAT 1861950 1140.41 876 NspI RCATGY 4178375 2559.18 390 PacI TTAATTAA 182652 111.87 8938 PaeR7I CTCGAG 212299 130.03 7690 PciI ACATGT 1348518 825.94 1210 PleI GAGTC 3410522 2088.88 478 PluTI GGCGCC 132180 80.96 12352 PmeI GTTTAAAC 48335 29.60 33778 PmlI CACGTG 339369 207.86 4810 PpuMI RGGWCCY 535335 327.88 3049 PsiI TTATAA 2242269 1373.35 728 PspGI CCWGG 3462751 2120.87 471 PspOMI GGGCCC 205443 125.83 7947 PspXI VCTCGAGB 57220 35.05 28533 PstI CTGCAG 1307453 800.79 1248 PvuI CGATCG 114460 70.10 14264 PvuII CAGCTG 1263464 773.85 1292 RsaI GTAC 6575067 4027.11 248 RsrII CGGWCCG 48024 29.41 33997 SacI GAGCTC 578676 354.43 2821 SacII CCGCGG 107940 66.11 15126 SalI GTCGAC 146449 89.70 11148 SapI GCTCTTC 352719 216.03 4628 Sau3AI GATC 7222971 4423.94 226 Sau96I GGNCC 4071210 2493.54 401 SbfI CCTGCAGG 29109 17.83 56089 ScaI AGTACT 616980 377.89 2646 ScrFI CCNGG 4532042 2775.79 360 SexAI ACCWGGT 220148 134.84 7416 SfaNI GCATC 4826978 2956.44 338 SfcI CTRYAG 3299619 2020.96 494 SfoI GGCGCC 132180 80.96 12352 SgrAI CRCCGGYG 22084 13.53 73931 SmaI CCCGGG 135759 83.15 12026 SmlI CTYRAG 2119326 1298.05 770 SnaBI TACGTA 224606 137.57 7269 SpeI ACTAGT 524678 321.36 3111 SphI GCATGC 702621 430.34 2323 SrfI GCCCGGGC 3029 1.86 539023 SspI AATATT 3634250 2225.91 449 StuI AGGCCT 556626 340.92 2933 StyD4I CCNGG 4532042 2775.79 360 StyI CCWWGG 1429139 875.32 1142 SwaI ATTTAAAT 234292 143.50 6968 TaqI TCGA 3352639 2053.43 486 TfiI GAWTC 4602636 2819.03 354 TseI GCWGC 5788047 3545.07 282 Tsp45I GTSAC 5084247 3114.01 321 TspMI CCCGGG 135759 83.15 12026 TspRI CASTG 8815223 5399.16 185 XbaI TCTAGA 511987 313.58 3188 XhoI CTCGAG 212299 130.03 7690 XmaI CCCGGG 135759 83.15 12026 ZraI GACGTC 272736 167.05 5986