# Salmo salar genome, 3412.114 Mbp of sequence in 829971 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 614476 180.09 5552 Acc65I GGTACC 1052628 308.50 3241 AccI GTMKAC 4265064 1249.98 800 AciI CCGC 11819867 3464.09 288 AclI AACGTT 1213649 355.69 2811 AcuI CTGAAG 3797308 1112.89 898 AfeI AGCGCT 490578 143.78 6955 AflII CTTAAG 716096 209.87 4764 AflIII ACRYGT 4547472 1332.74 750 AgeI ACCGGT 654671 191.87 5211 AluI AGCT 25183780 7380.70 135 AlwI GGATC 5777231 1693.15 590 ApaI GGGCCC 844855 247.60 4038 ApaLI GTGCAC 1215370 356.19 2807 ApeKI GCWGC 10969313 3214.81 311 ApoI RAATTY 6133826 1797.66 556 AscI GGCGCGCC 3532 1.04 966057 AseI ATTAAT 2047495 600.07 1666 AsiSI GCGATCGC 2451 0.72 1392131 AvaI CYCGRG 1537278 450.54 2219 AvaII GGWCC 7875869 2308.21 433 AvrII CCTAGG 870564 255.14 3919 BaeGI GKGCMC 3736771 1095.15 913 BamHI GGATCC 569686 166.96 5989 BanI GGYRCC 3177398 931.21 1073 BanII GRGCYC 3664680 1074.02 931 BbvI GCAGC 10969313 3214.81 311 BccI CCATC 13348221 3912.01 255 BceAI ACGGC 3719627 1090.12 917 BciVI GTATCC 1515493 444.15 2251 BclI TGATCA 1773148 519.66 1924 BcoDI GTCTC 14674338 4300.66 232 BfuAI ACCTGC 3264519 956.74 1045 BfuCI GATC 13306414 3899.76 256 BglII AGATCT 1392550 408.12 2450 BlpI GCTNAGC 1032395 302.57 3305 BmrI ACTGGG 3872065 1134.80 881 BmtI GCTAGC 1736775 509.00 1964 BpmI CTGGAG 5158246 1511.75 661 BpuEI CTTGAG 2087729 611.86 1634 BsaAI YACGTR 1857397 544.35 1837 BsaHI GRCGYC 1643292 481.61 2076 BsaI GGTCTC 2427846 711.54 1405 BsaWI WCCGGW 2163194 633.97 1577 BseRI GAGGAG 7226586 2117.92 472 BsgI GTGCAG 3074605 901.09 1109 BsiEI CGRYCG 944457 276.80 3612 BsiHKAI GWGCWC 4698987 1377.15 726 BsiWI CGTACG 158463 46.44 21532 BsmAI GTCTC 14674338 4300.66 232 BsmBI CGTCTC 1714530 502.48 1990 BsmFI GGGAC 8997028 2636.79 379 BsmI GAATGC 2579395 755.95 1322 BsoBI CYCGRG 1537278 450.54 2219 Bsp1286I GDGCHC 8937557 2619.36 381 BspCNI CTCAG 15328651 4492.42 222 BspDI ATCGAT 490335 143.70 6958 BspEI TCCGGA 536900 157.35 6355 BspHI TCATGA 1870441 548.18 1824 BspMI ACCTGC 3264519 956.74 1045 BspQI GCTCTTC 673789 197.47 5064 BsrBI CCGCTC 1199281 351.48 2845 BsrFI RCCGGY 1813513 531.49 1881 BsrGI TGTACA 2433614 713.23 1402 BsrI ACTGG 15717901 4606.50 217 BssHII GCGCGC 279188 81.82 12221 BssSI CACGAG 843798 247.29 4043 BstBI TTCGAA 527848 154.70 6464 BstEII GGTNACC 1247269 365.54 2735 BstNI CCWGG 14831909 4346.84 230 BstUI CGCG 2722184 797.80 1253 BstYI RGATCY 3807188 1115.79 896 BstZ17I GTATAC 1025559 300.56 3327 Bsu36I CCTNAGG 1277068 374.27 2671 BtgI CCRYGG 2833980 830.56 1204 BtgZI GCGATG 786241 230.43 4339 BtsCI GGATG 12083738 3541.42 282 ClaI ATCGAT 490335 143.70 6958 CviAII CATG 27851757 8162.61 122 CviKI-1 RGCY 79800228 23387.33 42 CviQI GTAC 17277182 5063.48 197 DdeI CTNAG 21923542 6425.21 155 DpnII GATC 13306414 3899.76 256 DraI TTTAAA 4820245 1412.69 707 EaeI YGGCCR 3475130 1018.47 981 EagI CGGCCG 298407 87.46 11434 EarI CTCTTC 4184763 1226.44 815 EciI GGCGGA 857210 251.23 3980 Eco53kI GAGCTC 1102656 323.16 3094 EcoO109I RGGNCCY 4469262 1309.82 763 EcoRI GAATTC 931704 273.06 3662 EcoRV GATATC 1032375 302.56 3305 FatI CATG 27851757 8162.61 122 FauI CCCGC 2939248 861.42 1160 Fnu4HI GCNGC 13459798 3944.71 253 FokI GGATG 12083738 3541.42 282 FseI GGCCGGCC 52720 15.45 64721 FspI TGCGCA 428618 125.62 7960 HaeII RGCGCY 1618929 474.47 2107 HaeIII GGCC 16269235 4768.08 209 HgaI GACGC 3090122 905.63 1104 HhaI GCGC 5502280 1612.57 620 HincII GTYRAC 4733300 1387.20 720 HindIII AAGCTT 1293563 379.11 2637 HinfI GANTC 16735498 4904.73 203 HinP1I GCGC 5502280 1612.57 620 HpaI GTTAAC 1424082 417.36 2396 HpaII CCGG 7335781 2149.92 465 HphI GGTGA 12495936 3662.23 273 Hpy188I TCNGA 23040582 6752.58 148 Hpy99I CGWCG 1855651 543.84 1838 HpyAV CCTTC 11807798 3460.55 288 HpyCH4III ACNGT 30646795 8981.76 111 HpyCH4IV ACGT 10346057 3032.15 329 HpyCH4V TGCA 27120861 7948.41 125 KasI GGCGCC 345531 101.27 9874 KpnI GGTACC 1052628 308.50 3241 MboI GATC 13306414 3899.76 256 MboII GAAGA 13970337 4094.34 244 MfeI CAATTG 1575848 461.84 2165 MluCI AATT 28332646 8303.55 120 MluI ACGCGT 236422 69.29 14432 MlyI GAGTC 9441996 2767.20 361 MmeI TCCRAC 4363696 1278.88 781 MnlI CCTC 54833352 16070.20 62 MscI TGGCCA 1974861 578.78 1727 MseI TTAA 30423207 8916.24 112 MspA1I CMGCKG 4059515 1189.74 840 MspI CCGG 7335781 2149.92 465 NaeI GCCGGC 385051 112.85 8861 NarI GGCGCC 345531 101.27 9874 NciI CCSGG 3616677 1059.95 943 NcoI CCATGG 1658893 486.18 2056 NdeI CATATG 1524025 446.65 2238 NgoMIV GCCGGC 385051 112.85 8861 NheI GCTAGC 1736775 509.00 1964 NlaIII CATG 27851757 8162.61 122 NmeAIII GCCGAG 830249 243.32 4109 NotI GCGGCCGC 5526 1.62 617465 NruI TCGCGA 76370 22.38 44678 NsiI ATGCAT 2268143 664.73 1504 NspI RCATGY 7137025 2091.67 478 PacI TTAATTAA 97269 28.51 35079 PaeR7I CTCGAG 281756 82.58 12110 PciI ACATGT 2638657 773.32 1293 PleI GAGTC 9441996 2767.20 361 PluTI GGCGCC 345531 101.27 9874 PmeI GTTTAAAC 125754 36.86 27133 PmlI CACGTG 648677 190.11 5260 PpuMI RGGWCCY 2460992 721.25 1386 PsiI TTATAA 2476918 725.92 1377 PspGI CCWGG 14831909 4346.84 230 PspOMI GGGCCC 844855 247.60 4038 PspXI VCTCGAGB 81194 23.80 42024 PstI CTGCAG 2451913 718.59 1391 PvuI CGATCG 150536 44.12 22666 PvuII CAGCTG 2637439 772.96 1293 RsaI GTAC 17277182 5063.48 197 RsrII CGGWCCG 97571 28.60 34970 SacI GAGCTC 1102656 323.16 3094 SacII CCGCGG 151085 44.28 22584 SalI GTCGAC 308985 90.56 11042 SapI GCTCTTC 673789 197.47 5064 Sau3AI GATC 13306414 3899.76 256 Sau96I GGNCC 15094310 4423.74 226 SbfI CCTGCAGG 65300 19.14 52252 ScaI AGTACT 1545676 453.00 2207 ScrFI CCNGG 18448586 5406.79 184 SexAI ACCWGGT 1354482 396.96 2519 SfaNI GCATC 7691714 2254.24 443 SfcI CTRYAG 11065107 3242.89 308 SfoI GGCGCC 345531 101.27 9874 SgrAI CRCCGGYG 40607 11.90 84027 SmaI CCCGGG 428283 125.52 7966 SmlI CTYRAG 3085581 904.30 1105 SnaBI TACGTA 426733 125.06 7995 SpeI ACTAGT 1452119 425.58 2349 SphI GCATGC 1057253 309.85 3227 SrfI GCCCGGGC 8358 2.45 408245 SspI AATATT 3421097 1002.63 997 StuI AGGCCT 2113213 619.33 1614 StyD4I CCNGG 18448586 5406.79 184 StyI CCWWGG 4643659 1360.93 734 SwaI ATTTAAAT 135595 39.74 25164 TaqI TCGA 6404151 1876.89 532 TfiI GAWTC 7293502 2137.53 467 TseI GCWGC 10969313 3214.81 311 Tsp45I GTSAC 12311855 3608.28 277 TspMI CCCGGG 428283 125.52 7966 TspRI CASTG 19808296 5805.29 172 XbaI TCTAGA 1386750 406.42 2460 XhoI CTCGAG 281756 82.58 12110 XmaI CCCGGG 428283 125.52 7966 ZraI GACGTC 614476 180.09 5552