# Pygocentrus nattereri genome, 1285.336 Mbp of sequence in 283517 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 280174 217.98 4587 Acc65I GGTACC 175350 136.42 7330 AccI GTMKAC 1098855 854.92 1169 AciI CCGC 4267610 3320.23 301 AclI AACGTT 409864 318.88 3136 AcuI CTGAAG 2343787 1823.48 548 AfeI AGCGCT 344309 267.87 3733 AflII CTTAAG 464847 361.65 2765 AflIII ACRYGT 1789725 1392.42 718 AgeI ACCGGT 128416 99.91 10009 AluI AGCT 11985453 9324.76 107 AlwI GGATC 2271785 1767.46 565 ApaI GGGCCC 211651 164.67 6072 ApaLI GTGCAC 562613 437.72 2284 ApeKI GCWGC 5690007 4426.86 225 ApoI RAATTY 4102982 3192.15 313 AscI GGCGCGCC 1319 1.03 974477 AseI ATTAAT 1435844 1117.10 895 AsiSI GCGATCGC 1136 0.88 1131457 AvaI CYCGRG 488065 379.72 2633 AvaII GGWCC 2258619 1757.22 569 AvrII CCTAGG 168660 131.22 7620 BaeGI GKGCMC 1289903 1003.55 996 BamHI GGATCC 205724 160.05 6247 BanI GGYRCC 877497 682.70 1464 BanII GRGCYC 1478730 1150.46 869 BbvI GCAGC 5690007 4426.86 225 BccI CCATC 4712659 3666.48 272 BceAI ACGGC 1324833 1030.73 970 BciVI GTATCC 460924 358.60 2788 BclI TGATCA 839117 652.84 1531 BcoDI GTCTC 4060959 3159.45 316 BfuAI ACCTGC 1240233 964.91 1036 BfuCI GATC 5727166 4455.77 224 BglII AGATCT 603476 469.51 2129 BlpI GCTNAGC 580109 451.33 2215 BmrI ACTGGG 1071800 833.87 1199 BmtI GCTAGC 309423 240.73 4153 BpmI CTGGAG 1955518 1521.41 657 BpuEI CTTGAG 1053819 819.88 1219 BsaAI YACGTR 685064 532.98 1876 BsaHI GRCGYC 687001 534.49 1870 BsaI GGTCTC 729078 567.23 1762 BsaWI WCCGGW 508272 395.44 2528 BseRI GAGGAG 1878618 1461.58 684 BsgI GTGCAG 1886361 1467.60 681 BsiEI CGRYCG 255162 198.52 5037 BsiHKAI GWGCWC 2272292 1767.86 565 BsiWI CGTACG 39566 30.78 32485 BsmAI GTCTC 4060959 3159.45 316 BsmBI CGTCTC 598072 465.30 2149 BsmFI GGGAC 2202649 1713.68 583 BsmI GAATGC 1022212 795.29 1257 BsoBI CYCGRG 488065 379.72 2633 Bsp1286I GDGCHC 3625815 2820.91 354 BspCNI CTCAG 7008540 5452.69 183 BspDI ATCGAT 145156 112.93 8854 BspEI TCCGGA 108251 84.22 11873 BspHI TCATGA 936471 728.58 1372 BspMI ACCTGC 1240233 964.91 1036 BspQI GCTCTTC 353109 274.72 3640 BsrBI CCGCTC 439468 341.91 2924 BsrFI RCCGGY 521297 405.57 2465 BsrGI TGTACA 1093305 850.60 1175 BsrI ACTGG 5429324 4224.05 236 BssHII GCGCGC 93906 73.06 13687 BssSI CACGAG 318404 247.72 4036 BstBI TTCGAA 139310 108.38 9226 BstEII GGTNACC 314033 244.32 4092 BstNI CCWGG 3862315 3004.91 332 BstUI CGCG 955230 743.18 1345 BstYI RGATCY 1498448 1165.80 857 BstZ17I GTATAC 294838 229.39 4359 Bsu36I CCTNAGG 403221 313.71 3187 BtgI CCRYGG 839692 653.29 1530 BtgZI GCGATG 353046 274.67 3640 BtsCI GGATG 4335048 3372.70 296 ClaI ATCGAT 145156 112.93 8854 CviAII CATG 11838003 9210.05 108 CviKI-1 RGCY 31838871 24770.86 40 CviQI GTAC 5729541 4457.62 224 DdeI CTNAG 9922053 7719.42 129 DpnII GATC 5727166 4455.77 224 DraI TTTAAA 2730962 2124.71 470 EaeI YGGCCR 1248559 971.39 1029 EagI CGGCCG 106802 83.09 12034 EarI CTCTTC 1702054 1324.21 755 EciI GGCGGA 342120 266.17 3756 Eco53kI GAGCTC 640846 498.58 2005 EcoO109I RGGNCCY 1077913 838.62 1192 EcoRI GAATTC 605013 470.70 2124 EcoRV GATATC 329660 256.48 3898 FatI CATG 11838003 9210.05 108 FauI CCCGC 841120 654.40 1528 Fnu4HI GCNGC 6768715 5266.11 189 FokI GGATG 4335048 3372.70 296 FseI GGCCGGCC 3826 2.98 335947 FspI TGCGCA 206133 160.37 6235 HaeII RGCGCY 846449 658.54 1518 HaeIII GGCC 5288697 4114.64 243 HgaI GACGC 1271847 989.51 1010 HhaI GCGC 2336821 1818.06 550 HincII GTYRAC 1332265 1036.51 964 HindIII AAGCTT 866371 674.04 1483 HinfI GANTC 6623845 5153.40 194 HinP1I GCGC 2336821 1818.06 550 HpaI GTTAAC 495539 385.53 2593 HpaII CCGG 1911551 1487.20 672 HphI GGTGA 4341445 3377.67 296 Hpy188I TCNGA 9898808 7701.34 129 Hpy99I CGWCG 493728 384.12 2603 HpyAV CCTTC 4528018 3522.83 283 HpyCH4III ACNGT 10984537 8546.04 117 HpyCH4IV ACGT 3808245 2962.84 337 HpyCH4V TGCA 14305746 11129.97 89 KasI GGCGCC 117393 91.33 10948 KpnI GGTACC 175350 136.42 7330 MboI GATC 5727166 4455.77 224 MboII GAAGA 6318978 4916.21 203 MfeI CAATTG 451194 351.03 2848 MluCI AATT 14759709 11483.15 87 MluI ACGCGT 58384 45.42 22015 MlyI GAGTC 3310077 2575.26 388 MmeI TCCRAC 1354160 1053.55 949 MnlI CCTC 17053549 13267.78 75 MscI TGGCCA 769090 598.36 1671 MseI TTAA 17749611 13809.32 72 MspA1I CMGCKG 1805174 1404.44 712 MspI CCGG 1911551 1487.20 672 NaeI GCCGGC 117265 91.23 10960 NarI GGCGCC 117393 91.33 10948 NciI CCSGG 907586 706.11 1416 NcoI CCATGG 510170 396.92 2519 NdeI CATATG 727958 566.36 1765 NgoMIV GCCGGC 117265 91.23 10960 NheI GCTAGC 309423 240.73 4153 NlaIII CATG 11838003 9210.05 108 NmeAIII GCCGAG 367552 285.96 3497 NotI GCGGCCGC 3209 2.50 400540 NruI TCGCGA 43044 33.49 29860 NsiI ATGCAT 993761 773.15 1293 NspI RCATGY 3340725 2599.11 384 PacI TTAATTAA 80986 63.01 15871 PaeR7I CTCGAG 136397 106.12 9423 PciI ACATGT 1117292 869.26 1150 PleI GAGTC 3310077 2575.26 388 PluTI GGCGCC 117393 91.33 10948 PmeI GTTTAAAC 37676 29.31 34115 PmlI CACGTG 228232 177.57 5631 PpuMI RGGWCCY 578930 450.41 2220 PsiI TTATAA 1231245 957.92 1043 PspGI CCWGG 3862315 3004.91 332 PspOMI GGGCCC 211651 164.67 6072 PspXI VCTCGAGB 41322 32.15 31105 PstI CTGCAG 1437953 1118.74 893 PvuI CGATCG 39202 30.50 32787 PvuII CAGCTG 1223168 951.63 1050 RsaI GTAC 5729541 4457.62 224 RsrII CGGWCCG 35152 27.35 36565 SacI GAGCTC 640846 498.58 2005 SacII CCGCGG 54013 42.02 23796 SalI GTCGAC 95900 74.61 13402 SapI GCTCTTC 353109 274.72 3640 Sau3AI GATC 5727166 4455.77 224 Sau96I GGNCC 4296095 3342.39 299 SbfI CCTGCAGG 27785 21.62 46260 ScaI AGTACT 567357 441.41 2265 ScrFI CCNGG 4769901 3711.02 269 SexAI ACCWGGT 242605 188.75 5298 SfaNI GCATC 3680390 2863.37 349 SfcI CTRYAG 3877374 3016.62 331 SfoI GGCGCC 117393 91.33 10948 SgrAI CRCCGGYG 14202 11.05 90503 SmaI CCCGGG 118856 92.47 10814 SmlI CTYRAG 1655063 1287.65 776 SnaBI TACGTA 139501 108.53 9213 SpeI ACTAGT 394745 307.11 3256 SphI GCATGC 497759 387.26 2582 SrfI GCCCGGGC 3203 2.49 401291 SspI AATATT 1740597 1354.20 738 StuI AGGCCT 613295 477.15 2095 StyD4I CCNGG 4769901 3711.02 269 StyI CCWWGG 1401824 1090.63 916 SwaI ATTTAAAT 95388 74.21 13474 TaqI TCGA 1989091 1547.53 646 TfiI GAWTC 3313768 2578.13 387 TseI GCWGC 5690007 4426.86 225 Tsp45I GTSAC 4144000 3224.06 310 TspMI CCCGGG 118856 92.47 10814 TspRI CASTG 9825407 7644.23 130 XbaI TCTAGA 547091 425.64 2349 XhoI CTCGAG 136397 106.12 9423 XmaI CCCGGG 118856 92.47 10814 ZraI GACGTC 280174 217.98 4587