# Poecilia latipinna genome, 815.145 Mbp of sequence in 17988 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 142105 174.33 5736 Acc65I GGTACC 79359 97.36 10271 AccI GTMKAC 460326 564.72 1770 AciI CCGC 2864723 3514.37 284 AclI AACGTT 257171 315.49 3169 AcuI CTGAAG 1246286 1528.91 654 AfeI AGCGCT 168937 207.25 4825 AflII CTTAAG 257638 316.06 3163 AflIII ACRYGT 991336 1216.15 822 AgeI ACCGGT 84619 103.81 9633 AluI AGCT 6631021 8134.78 122 AlwI GGATC 1469556 1802.82 554 ApaI GGGCCC 98523 120.87 8273 ApaLI GTGCAC 212061 260.15 3843 ApeKI GCWGC 3797210 4658.33 214 ApoI RAATTY 2520007 3091.48 323 AscI GGCGCGCC 2034 2.50 400759 AseI ATTAAT 881064 1080.87 925 AsiSI GCGATCGC 996 1.22 818418 AvaI CYCGRG 284289 348.76 2867 AvaII GGWCC 1157943 1420.54 703 AvrII CCTAGG 49011 60.13 16631 BaeGI GKGCMC 506650 621.55 1608 BamHI GGATCC 162782 199.70 5007 BanI GGYRCC 427704 524.70 1905 BanII GRGCYC 662476 812.71 1230 BbvI GCAGC 3797210 4658.33 214 BccI CCATC 2455953 3012.90 331 BceAI ACGGC 918765 1127.12 887 BciVI GTATCC 229156 281.12 3557 BclI TGATCA 462413 567.28 1762 BcoDI GTCTC 2181914 2676.72 373 BfuAI ACCTGC 731760 897.71 1113 BfuCI GATC 3360836 4122.99 242 BglII AGATCT 350022 429.40 2328 BlpI GCTNAGC 301459 369.82 2703 BmrI ACTGGG 519262 637.02 1569 BmtI GCTAGC 163415 200.47 4988 BpmI CTGGAG 1042207 1278.55 782 BpuEI CTTGAG 541402 664.18 1505 BsaAI YACGTR 353879 434.13 2303 BsaHI GRCGYC 429919 527.41 1896 BsaI GGTCTC 367193 450.46 2219 BsaWI WCCGGW 369643 453.47 2205 BseRI GAGGAG 1128877 1384.88 722 BsgI GTGCAG 854105 1047.80 954 BsiEI CGRYCG 187026 229.44 4358 BsiHKAI GWGCWC 928249 1138.75 878 BsiWI CGTACG 32942 40.41 24744 BsmAI GTCTC 2181914 2676.72 373 BsmBI CGTCTC 409085 501.86 1992 BsmFI GGGAC 1173871 1440.08 694 BsmI GAATGC 526687 646.13 1547 BsoBI CYCGRG 284289 348.76 2867 Bsp1286I GDGCHC 1493012 1831.59 545 BspCNI CTCAG 3335230 4091.58 244 BspDI ATCGAT 126881 155.65 6424 BspEI TCCGGA 75094 92.12 10854 BspHI TCATGA 466278 572.02 1748 BspMI ACCTGC 731760 897.71 1113 BspQI GCTCTTC 184112 225.86 4427 BsrBI CCGCTC 266024 326.35 3064 BsrFI RCCGGY 347977 426.89 2342 BsrGI TGTACA 442340 542.65 1842 BsrI ACTGG 2594046 3182.31 314 BssHII GCGCGC 55695 68.33 14635 BssSI CACGAG 183068 224.58 4452 BstBI TTCGAA 84285 103.40 9671 BstEII GGTNACC 159621 195.82 5106 BstNI CCWGG 2215160 2717.51 367 BstUI CGCG 589428 723.10 1382 BstYI RGATCY 981871 1204.54 830 BstZ17I GTATAC 101303 124.28 8046 Bsu36I CCTNAGG 199431 244.66 4087 BtgI CCRYGG 439600 539.29 1854 BtgZI GCGATG 211655 259.65 3851 BtsCI GGATG 2470181 3030.36 329 ClaI ATCGAT 126881 155.65 6424 CviAII CATG 5983898 7340.90 136 CviKI-1 RGCY 16160490 19825.30 50 CviQI GTAC 2399917 2944.16 339 DdeI CTNAG 4830989 5926.54 168 DpnII GATC 3360836 4122.99 242 DraI TTTAAA 2029967 2490.31 401 EaeI YGGCCR 542753 665.84 1501 EagI CGGCCG 67493 82.80 12077 EarI CTCTTC 921185 1130.09 884 EciI GGCGGA 217321 266.60 3750 Eco53kI GAGCTC 293779 360.40 2774 EcoO109I RGGNCCY 481850 591.12 1691 EcoRI GAATTC 221181 271.34 3685 EcoRV GATATC 173454 212.79 4699 FatI CATG 5983898 7340.90 136 FauI CCCGC 602529 739.17 1352 Fnu4HI GCNGC 4575413 5613.01 178 FokI GGATG 2470181 3030.36 329 FseI GGCCGGCC 3582 4.39 227566 FspI TGCGCA 110894 136.04 7350 HaeII RGCGCY 498477 611.52 1635 HaeIII GGCC 2343910 2875.45 347 HgaI GACGC 820276 1006.29 993 HhaI GCGC 1370836 1681.71 594 HincII GTYRAC 833945 1023.06 977 HindIII AAGCTT 488693 599.52 1668 HinfI GANTC 3827919 4696.00 212 HinP1I GCGC 1370836 1681.71 594 HpaI GTTAAC 241069 295.74 3381 HpaII CCGG 1341686 1645.95 607 HphI GGTGA 2338884 2869.29 348 Hpy188I TCNGA 5650084 6931.39 144 Hpy99I CGWCG 447888 549.46 1819 HpyAV CCTTC 2551286 3129.86 319 HpyCH4III ACNGT 4621745 5669.85 176 HpyCH4IV ACGT 2211860 2713.46 368 HpyCH4V TGCA 8021330 9840.38 101 KasI GGCGCC 86929 106.64 9377 KpnI GGTACC 79359 97.36 10271 MboI GATC 3360836 4122.99 242 MboII GAAGA 3802248 4664.51 214 MfeI CAATTG 242283 297.23 3364 MluCI AATT 9675436 11869.59 84 MluI ACGCGT 42212 51.78 19310 MlyI GAGTC 1817928 2230.19 448 MmeI TCCRAC 924574 1134.25 881 MnlI CCTC 9504307 11659.66 85 MscI TGGCCA 265822 326.10 3066 MseI TTAA 11208209 13749.96 72 MspA1I CMGCKG 1250052 1533.53 652 MspI CCGG 1341686 1645.95 607 NaeI GCCGGC 90529 111.06 9004 NarI GGCGCC 86929 106.64 9377 NciI CCSGG 601584 738.01 1354 NcoI CCATGG 209481 256.99 3891 NdeI CATATG 293256 359.76 2779 NgoMIV GCCGGC 90529 111.06 9004 NheI GCTAGC 163415 200.47 4988 NlaIII CATG 5983898 7340.90 136 NmeAIII GCCGAG 227670 279.30 3580 NotI GCGGCCGC 3140 3.85 259600 NruI TCGCGA 20506 25.16 39751 NsiI ATGCAT 558211 684.80 1460 NspI RCATGY 1725640 2116.97 472 PacI TTAATTAA 52169 64.00 15625 PaeR7I CTCGAG 77492 95.07 10519 PciI ACATGT 622414 763.56 1309 PleI GAGTC 1817928 2230.19 448 PluTI GGCGCC 86929 106.64 9377 PmeI GTTTAAAC 23858 29.27 34166 PmlI CACGTG 110335 135.36 7387 PpuMI RGGWCCY 259828 318.75 3137 PsiI TTATAA 689267 845.58 1182 PspGI CCWGG 2215160 2717.51 367 PspOMI GGGCCC 98523 120.87 8273 PspXI VCTCGAGB 23027 28.25 35399 PstI CTGCAG 999665 1226.37 815 PvuI CGATCG 35056 43.01 23252 PvuII CAGCTG 836273 1025.92 974 RsaI GTAC 2399917 2944.16 339 RsrII CGGWCCG 37976 46.59 21464 SacI GAGCTC 293779 360.40 2774 SacII CCGCGG 49598 60.85 16435 SalI GTCGAC 79104 97.04 10304 SapI GCTCTTC 184112 225.86 4427 Sau3AI GATC 3360836 4122.99 242 Sau96I GGNCC 2132104 2615.61 382 SbfI CCTGCAGG 27448 33.67 29697 ScaI AGTACT 208349 255.60 3912 ScrFI CCNGG 2816744 3455.51 289 SexAI ACCWGGT 158846 194.87 5131 SfaNI GCATC 2150733 2638.47 379 SfcI CTRYAG 1810541 2221.13 450 SfoI GGCGCC 86929 106.64 9377 SgrAI CRCCGGYG 10729 13.16 75975 SmaI CCCGGG 61665 75.65 13218 SmlI CTYRAG 876532 1075.31 929 SnaBI TACGTA 77310 94.84 10543 SpeI ACTAGT 159746 195.97 5102 SphI GCATGC 258942 317.66 3147 SrfI GCCCGGGC 1622 1.99 502555 SspI AATATT 1238506 1519.37 658 StuI AGGCCT 231937 284.53 3514 StyD4I CCNGG 2816744 3455.51 289 StyI CCWWGG 621958 763.00 1310 SwaI ATTTAAAT 74998 92.01 10868 TaqI TCGA 1349537 1655.58 604 TfiI GAWTC 2009991 2465.81 405 TseI GCWGC 3797210 4658.33 214 Tsp45I GTSAC 2242834 2751.45 363 TspMI CCCGGG 61665 75.65 13218 TspRI CASTG 3630922 4454.33 224 XbaI TCTAGA 236414 290.03 3447 XhoI CTCGAG 77492 95.07 10519 XmaI CCCGGG 61665 75.65 13218 ZraI GACGTC 142105 174.33 5736