# Poecilia formosa genome, 748.923 Mbp of sequence in 3985 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 149260 199.30 5017 Acc65I GGTACC 83458 111.44 8973 AccI GTMKAC 483607 645.74 1548 AciI CCGC 2987439 3988.98 250 AclI AACGTT 273910 365.74 2734 AcuI CTGAAG 1310385 1749.69 571 AfeI AGCGCT 176112 235.15 4252 AflII CTTAAG 271788 362.90 2755 AflIII ACRYGT 1046734 1397.65 715 AgeI ACCGGT 89444 119.43 8373 AluI AGCT 6958357 9291.15 107 AlwI GGATC 1539343 2055.41 486 ApaI GGGCCC 103112 137.68 7263 ApaLI GTGCAC 222919 297.65 3359 ApeKI GCWGC 3974861 5307.43 188 ApoI RAATTY 2643668 3529.96 283 AscI GGCGCGCC 1895 2.53 395210 AseI ATTAAT 929640 1241.30 805 AsiSI GCGATCGC 1020 1.36 734238 AvaI CYCGRG 294219 392.86 2545 AvaII GGWCC 1219404 1628.21 614 AvrII CCTAGG 51308 68.51 14596 BaeGI GKGCMC 533394 712.21 1404 BamHI GGATCC 169983 226.97 4405 BanI GGYRCC 448471 598.82 1669 BanII GRGCYC 694414 927.22 1078 BbvI GCAGC 3974861 5307.43 188 BccI CCATC 2578018 3442.30 290 BceAI ACGGC 956966 1277.79 782 BciVI GTATCC 240096 320.59 3119 BclI TGATCA 486620 649.76 1539 BcoDI GTCTC 2291245 3059.38 326 BfuAI ACCTGC 768947 1026.74 973 BfuCI GATC 3530072 4713.53 212 BglII AGATCT 367173 490.27 2039 BlpI GCTNAGC 316880 423.11 2363 BmrI ACTGGG 545490 728.37 1372 BmtI GCTAGC 170818 228.08 4384 BpmI CTGGAG 1090188 1455.67 686 BpuEI CTTGAG 568391 758.94 1317 BsaAI YACGTR 372136 496.89 2012 BsaHI GRCGYC 449249 599.86 1667 BsaI GGTCTC 387497 517.41 1932 BsaWI WCCGGW 389352 519.88 1923 BseRI GAGGAG 1184691 1581.86 632 BsgI GTGCAG 898252 1199.39 833 BsiEI CGRYCG 195377 260.88 3833 BsiHKAI GWGCWC 976019 1303.23 767 BsiWI CGTACG 34356 45.87 21798 BsmAI GTCTC 2291245 3059.38 326 BsmBI CGTCTC 426210 569.10 1757 BsmFI GGGAC 1232369 1645.52 607 BsmI GAATGC 551461 736.34 1358 BsoBI CYCGRG 294219 392.86 2545 Bsp1286I GDGCHC 1569409 2095.55 477 BspCNI CTCAG 3501500 4675.38 213 BspDI ATCGAT 133501 178.26 5609 BspEI TCCGGA 78739 105.14 9511 BspHI TCATGA 488015 651.62 1534 BspMI ACCTGC 768947 1026.74 973 BspQI GCTCTTC 193014 257.72 3880 BsrBI CCGCTC 278186 371.45 2692 BsrFI RCCGGY 364384 486.54 2055 BsrGI TGTACA 464565 620.31 1612 BsrI ACTGG 2728016 3642.58 274 BssHII GCGCGC 58591 78.23 12782 BssSI CACGAG 191149 255.23 3918 BstBI TTCGAA 88035 117.55 8507 BstEII GGTNACC 168662 225.21 4440 BstNI CCWGG 2328452 3109.07 321 BstUI CGCG 617667 824.74 1212 BstYI RGATCY 1027805 1372.38 728 BstZ17I GTATAC 106844 142.66 7009 Bsu36I CCTNAGG 208611 278.55 3590 BtgI CCRYGG 461675 616.45 1622 BtgZI GCGATG 220799 294.82 3391 BtsCI GGATG 2588235 3455.94 289 ClaI ATCGAT 133501 178.26 5609 CviAII CATG 6297606 8408.88 118 CviKI-1 RGCY 16939456 22618.41 44 CviQI GTAC 2525432 3372.08 296 DdeI CTNAG 5079982 6783.05 147 DpnII GATC 3530072 4713.53 212 DraI TTTAAA 2140126 2857.60 349 EaeI YGGCCR 568054 758.49 1318 EagI CGGCCG 69909 93.35 10712 EarI CTCTTC 967642 1292.04 773 EciI GGCGGA 226966 303.06 3299 Eco53kI GAGCTC 308387 411.77 2428 EcoO109I RGGNCCY 503388 672.15 1487 EcoRI GAATTC 232904 310.99 3215 EcoRV GATATC 181211 241.96 4132 FatI CATG 6297606 8408.88 118 FauI CCCGC 625180 834.77 1197 Fnu4HI GCNGC 4783739 6387.49 156 FokI GGATG 2588235 3455.94 289 FseI GGCCGGCC 3712 4.96 201757 FspI TGCGCA 117942 157.48 6349 HaeII RGCGCY 520240 694.65 1439 HaeIII GGCC 2450793 3272.42 305 HgaI GACGC 857071 1144.40 873 HhaI GCGC 1438639 1920.94 520 HincII GTYRAC 879175 1173.92 851 HindIII AAGCTT 514419 686.88 1455 HinfI GANTC 4019654 5367.24 186 HinP1I GCGC 1438639 1920.94 520 HpaI GTTAAC 254759 340.17 2939 HpaII CCGG 1399094 1868.14 535 HphI GGTGA 2466404 3293.27 303 Hpy188I TCNGA 5937159 7927.59 126 Hpy99I CGWCG 465859 622.04 1607 HpyAV CCTTC 2674249 3570.79 280 HpyCH4III ACNGT 4865783 6497.04 153 HpyCH4IV ACGT 2333815 3116.23 320 HpyCH4V TGCA 8439555 11268.92 88 KasI GGCGCC 90191 120.43 8303 KpnI GGTACC 83458 111.44 8973 MboI GATC 3530072 4713.53 212 MboII GAAGA 4003695 5345.93 187 MfeI CAATTG 257013 343.18 2913 MluCI AATT 10203300 13623.96 73 MluI ACGCGT 44087 58.87 16987 MlyI GAGTC 1905958 2544.93 392 MmeI TCCRAC 966929 1291.09 774 MnlI CCTC 9954020 13291.10 75 MscI TGGCCA 278632 372.04 2687 MseI TTAA 11831798 15798.41 63 MspA1I CMGCKG 1304299 1741.57 574 MspI CCGG 1399094 1868.14 535 NaeI GCCGGC 94259 125.86 7945 NarI GGCGCC 90191 120.43 8303 NciI CCSGG 623397 832.39 1201 NcoI CCATGG 221366 295.58 3383 NdeI CATATG 308155 411.46 2430 NgoMIV GCCGGC 94259 125.86 7945 NheI GCTAGC 170818 228.08 4384 NlaIII CATG 6297606 8408.88 118 NmeAIII GCCGAG 236615 315.94 3165 NotI GCGGCCGC 3202 4.28 233892 NruI TCGCGA 20747 27.70 36097 NsiI ATGCAT 585816 782.21 1278 NspI RCATGY 1818942 2428.74 411 PacI TTAATTAA 55588 74.22 13472 PaeR7I CTCGAG 80558 107.57 9296 PciI ACATGT 659144 880.12 1136 PleI GAGTC 1905958 2544.93 392 PluTI GGCGCC 90191 120.43 8303 PmeI GTTTAAAC 24792 33.10 30208 PmlI CACGTG 117000 156.22 6401 PpuMI RGGWCCY 271381 362.36 2759 PsiI TTATAA 727170 970.95 1029 PspGI CCWGG 2328452 3109.07 321 PspOMI GGGCCC 103112 137.68 7263 PspXI VCTCGAGB 24260 32.39 30870 PstI CTGCAG 1047238 1398.32 715 PvuI CGATCG 36701 49.01 20406 PvuII CAGCTG 873401 1166.21 857 RsaI GTAC 2525432 3372.08 296 RsrII CGGWCCG 39596 52.87 18914 SacI GAGCTC 308387 411.77 2428 SacII CCGCGG 51020 68.12 14679 SalI GTCGAC 82169 109.72 9114 SapI GCTCTTC 193014 257.72 3880 Sau3AI GATC 3530072 4713.53 212 Sau96I GGNCC 2235043 2984.34 335 SbfI CCTGCAGG 28786 38.44 26016 ScaI AGTACT 219042 292.48 3419 ScrFI CCNGG 2951849 3941.46 253 SexAI ACCWGGT 167193 223.24 4479 SfaNI GCATC 2254307 3010.06 332 SfcI CTRYAG 1899216 2535.93 394 SfoI GGCGCC 90191 120.43 8303 SgrAI CRCCGGYG 11262 15.04 66500 SmaI CCCGGG 63148 84.32 11859 SmlI CTYRAG 920737 1229.41 813 SnaBI TACGTA 80479 107.46 9305 SpeI ACTAGT 168410 224.87 4447 SphI GCATGC 269608 359.99 2777 SrfI GCCCGGGC 1713 2.29 437199 SspI AATATT 1306629 1744.68 573 StuI AGGCCT 243590 325.25 3074 StyD4I CCNGG 2951849 3941.46 253 StyI CCWWGG 655830 875.70 1141 SwaI ATTTAAAT 79323 105.92 9441 TaqI TCGA 1408158 1880.24 531 TfiI GAWTC 2113696 2822.31 354 TseI GCWGC 3974861 5307.43 188 Tsp45I GTSAC 2363217 3155.49 316 TspMI CCCGGG 63148 84.32 11859 TspRI CASTG 3823728 5105.63 195 XbaI TCTAGA 249474 333.11 3002 XhoI CTCGAG 80558 107.57 9296 XmaI CCCGGG 63148 84.32 11859 ZraI GACGTC 149260 199.30 5017