# Periophthalmus magnuspinnatus genome, 701.697 Mbp of sequence in 26060 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 152372 217.15 4605 Acc65I GGTACC 72421 103.21 9689 AccI GTMKAC 624281 889.67 1124 AciI CCGC 2934053 4181.37 239 AclI AACGTT 205495 292.85 3414 AcuI CTGAAG 1013045 1443.71 692 AfeI AGCGCT 192821 274.79 3639 AflII CTTAAG 266220 379.39 2635 AflIII ACRYGT 1286846 1833.91 545 AgeI ACCGGT 81936 116.77 8563 AluI AGCT 5588793 7964.68 125 AlwI GGATC 1330475 1896.08 527 ApaI GGGCCC 162265 231.25 4324 ApaLI GTGCAC 358819 511.36 1955 ApeKI GCWGC 2729352 3889.65 257 ApoI RAATTY 1896157 2702.25 370 AscI GGCGCGCC 977 1.39 718215 AseI ATTAAT 704857 1004.50 995 AsiSI GCGATCGC 887 1.26 791089 AvaI CYCGRG 419430 597.74 1672 AvaII GGWCC 1473914 2100.50 476 AvrII CCTAGG 58539 83.42 11986 BaeGI GKGCMC 845749 1205.29 829 BamHI GGATCC 128395 182.98 5465 BanI GGYRCC 432612 616.52 1622 BanII GRGCYC 787110 1121.72 891 BbvI GCAGC 2729352 3889.65 257 BccI CCATC 2181583 3109.01 321 BceAI ACGGC 794480 1132.23 883 BciVI GTATCC 277500 395.47 2528 BclI TGATCA 399683 569.60 1755 BcoDI GTCTC 2564798 3655.14 273 BfuAI ACCTGC 769249 1096.27 912 BfuCI GATC 3136912 4470.47 223 BglII AGATCT 380150 541.76 1845 BlpI GCTNAGC 199535 284.36 3516 BmrI ACTGGG 562161 801.15 1248 BmtI GCTAGC 203335 289.78 3450 BpmI CTGGAG 1106288 1576.59 634 BpuEI CTTGAG 601588 857.33 1166 BsaAI YACGTR 493113 702.74 1422 BsaHI GRCGYC 439945 626.97 1594 BsaI GGTCTC 378228 539.02 1855 BsaWI WCCGGW 351231 500.55 1997 BseRI GAGGAG 1903386 2712.55 368 BsgI GTGCAG 991256 1412.66 707 BsiEI CGRYCG 164340 234.20 4269 BsiHKAI GWGCWC 1232478 1756.43 569 BsiWI CGTACG 39066 55.67 17961 BsmAI GTCTC 2564798 3655.14 273 BsmBI CGTCTC 378497 539.40 1853 BsmFI GGGAC 1757591 2504.77 399 BsmI GAATGC 471031 671.27 1489 BsoBI CYCGRG 419430 597.74 1672 Bsp1286I GDGCHC 2055153 2928.83 341 BspCNI CTCAG 2943446 4194.75 238 BspDI ATCGAT 122718 174.89 5717 BspEI TCCGGA 83634 119.19 8390 BspHI TCATGA 427733 609.57 1640 BspMI ACCTGC 769249 1096.27 912 BspQI GCTCTTC 157475 224.42 4455 BsrBI CCGCTC 355775 507.02 1972 BsrFI RCCGGY 258188 367.95 2717 BsrGI TGTACA 615194 876.72 1140 BsrI ACTGG 2643607 3767.45 265 BssHII GCGCGC 68466 97.57 10248 BssSI CACGAG 282721 402.91 2481 BstBI TTCGAA 79297 113.01 8848 BstEII GGTNACC 130221 185.58 5388 BstNI CCWGG 2911697 4149.51 240 BstUI CGCG 770615 1098.22 910 BstYI RGATCY 902961 1286.83 777 BstZ17I GTATAC 164931 235.05 4254 Bsu36I CCTNAGG 191833 273.38 3657 BtgI CCRYGG 659791 940.28 1063 BtgZI GCGATG 211816 301.86 3312 BtsCI GGATG 1990444 2836.62 352 ClaI ATCGAT 122718 174.89 5717 CviAII CATG 6313212 8997.07 111 CviKI-1 RGCY 15535173 22139.44 45 CviQI GTAC 3549485 5058.43 197 DdeI CTNAG 4284979 6106.60 163 DpnII GATC 3136912 4470.47 223 DraI TTTAAA 1944349 2770.92 360 EaeI YGGCCR 499812 712.29 1403 EagI CGGCCG 46428 66.17 15113 EarI CTCTTC 1015187 1446.76 691 EciI GGCGGA 200710 286.04 3496 Eco53kI GAGCTC 289100 412.00 2427 EcoO109I RGGNCCY 693959 988.97 1011 EcoRI GAATTC 212812 303.28 3297 EcoRV GATATC 177886 253.51 3944 FatI CATG 6313212 8997.07 111 FauI CCCGC 713301 1016.54 983 Fnu4HI GCNGC 3443457 4907.33 203 FokI GGATG 1990444 2836.62 352 FseI GGCCGGCC 2248 3.20 312142 FspI TGCGCA 116941 166.65 6000 HaeII RGCGCY 523403 745.91 1340 HaeIII GGCC 2716898 3871.90 258 HgaI GACGC 853955 1216.99 821 HhaI GCGC 1514681 2158.60 463 HincII GTYRAC 777001 1107.32 903 HindIII AAGCTT 332235 473.47 2112 HinfI GANTC 3627148 5169.11 193 HinP1I GCGC 1514681 2158.60 463 HpaI GTTAAC 246861 351.81 2842 HpaII CCGG 1316416 1876.05 533 HphI GGTGA 2393662 3411.25 293 Hpy188I TCNGA 4940810 7041.23 142 Hpy99I CGWCG 410792 585.43 1708 HpyAV CCTTC 2150880 3065.26 326 HpyCH4III ACNGT 5623435 8014.05 124 HpyCH4IV ACGT 2397544 3416.78 292 HpyCH4V TGCA 7345870 10468.72 95 KasI GGCGCC 81890 116.70 8568 KpnI GGTACC 72421 103.21 9689 MboI GATC 3136912 4470.47 223 MboII GAAGA 3274810 4666.99 214 MfeI CAATTG 244235 348.06 2873 MluCI AATT 8163798 11634.37 85 MluI ACGCGT 43378 61.82 16176 MlyI GAGTC 1882700 2683.07 372 MmeI TCCRAC 720477 1026.76 973 MnlI CCTC 10983751 15653.13 63 MscI TGGCCA 273408 389.64 2566 MseI TTAA 10447120 14888.37 67 MspA1I CMGCKG 930487 1326.05 754 MspI CCGG 1316416 1876.05 533 NaeI GCCGGC 48254 68.77 14541 NarI GGCGCC 81890 116.70 8568 NciI CCSGG 762478 1086.62 920 NcoI CCATGG 371710 529.73 1887 NdeI CATATG 356969 508.72 1965 NgoMIV GCCGGC 48254 68.77 14541 NheI GCTAGC 203335 289.78 3450 NlaIII CATG 6313212 8997.07 111 NmeAIII GCCGAG 176092 250.95 3984 NotI GCGGCCGC 2157 3.07 325311 NruI TCGCGA 22961 32.72 30560 NsiI ATGCAT 534087 761.14 1313 NspI RCATGY 1836569 2617.33 382 PacI TTAATTAA 48958 69.77 14332 PaeR7I CTCGAG 92815 132.27 7560 PciI ACATGT 809184 1153.18 867 PleI GAGTC 1882700 2683.07 372 PluTI GGCGCC 81890 116.70 8568 PmeI GTTTAAAC 36744 52.36 19096 PmlI CACGTG 178240 254.01 3936 PpuMI RGGWCCY 354553 505.28 1979 PsiI TTATAA 853682 1216.60 821 PspGI CCWGG 2911697 4149.51 240 PspOMI GGGCCC 162265 231.25 4324 PspXI VCTCGAGB 29371 41.86 23890 PstI CTGCAG 699278 996.55 1003 PvuI CGATCG 34392 49.01 20402 PvuII CAGCTG 548428 781.57 1279 RsaI GTAC 3549485 5058.43 197 RsrII CGGWCCG 22112 31.51 31733 SacI GAGCTC 289100 412.00 2427 SacII CCGCGG 60509 86.23 11596 SalI GTCGAC 82079 116.97 8549 SapI GCTCTTC 157475 224.42 4455 Sau3AI GATC 3136912 4470.47 223 Sau96I GGNCC 2822439 4022.31 248 SbfI CCTGCAGG 13335 19.00 52620 ScaI AGTACT 415909 592.72 1687 ScrFI CCNGG 3674175 5236.13 190 SexAI ACCWGGT 233595 332.90 3003 SfaNI GCATC 1747801 2490.82 401 SfcI CTRYAG 1759834 2507.97 398 SfoI GGCGCC 81890 116.70 8568 SgrAI CRCCGGYG 9043 12.89 77595 SmaI CCCGGG 115554 164.68 6072 SmlI CTYRAG 960623 1369.00 730 SnaBI TACGTA 94581 134.79 7419 SpeI ACTAGT 241424 344.06 2906 SphI GCATGC 193568 275.86 3625 SrfI GCCCGGGC 3358 4.79 208962 SspI AATATT 1117673 1592.81 627 StuI AGGCCT 281961 401.83 2488 StyD4I CCNGG 3674175 5236.13 190 StyI CCWWGG 819035 1167.22 856 SwaI ATTTAAAT 65133 92.82 10773 TaqI TCGA 1413207 2013.99 496 TfiI GAWTC 1744448 2486.04 402 TseI GCWGC 2729352 3889.65 257 Tsp45I GTSAC 2568887 3660.96 273 TspMI CCCGGG 115554 164.68 6072 TspRI CASTG 4422957 6303.23 158 XbaI TCTAGA 207265 295.38 3385 XhoI CTCGAG 92815 132.27 7560 XmaI CCCGGG 115554 164.68 6072 ZraI GACGTC 152372 217.15 4605