# Periophthalmodon schlosseri genome, 679.761 Mbp of sequence in 46662 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 160855 236.63 4225 Acc65I GGTACC 75176 110.59 9042 AccI GTMKAC 611958 900.25 1110 AciI CCGC 3134885 4611.75 216 AclI AACGTT 195294 287.30 3480 AcuI CTGAAG 986797 1451.68 688 AfeI AGCGCT 233446 343.42 2911 AflII CTTAAG 283748 417.42 2395 AflIII ACRYGT 1223456 1799.83 555 AgeI ACCGGT 82114 120.80 8278 AluI AGCT 5558510 8177.15 122 AlwI GGATC 1298499 1910.23 523 ApaI GGGCCC 179035 263.38 3796 ApaLI GTGCAC 363340 534.51 1870 ApeKI GCWGC 2727219 4012.03 249 ApoI RAATTY 1901018 2796.60 357 AscI GGCGCGCC 1052 1.55 646160 AseI ATTAAT 673212 990.37 1009 AsiSI GCGATCGC 1000 1.47 679761 AvaI CYCGRG 399054 587.05 1703 AvaII GGWCC 1446508 2127.97 469 AvrII CCTAGG 55893 82.22 12161 BaeGI GKGCMC 887722 1305.93 765 BamHI GGATCC 129636 190.71 5243 BanI GGYRCC 475377 699.33 1429 BanII GRGCYC 805997 1185.71 843 BbvI GCAGC 2727219 4012.03 249 BccI CCATC 2098403 3086.97 323 BceAI ACGGC 810060 1191.68 839 BciVI GTATCC 284738 418.88 2387 BclI TGATCA 379433 558.19 1791 BcoDI GTCTC 2375011 3493.89 286 BfuAI ACCTGC 777072 1143.15 874 BfuCI GATC 3082209 4534.25 220 BglII AGATCT 381553 561.30 1781 BlpI GCTNAGC 218103 320.85 3116 BmrI ACTGGG 581493 855.44 1168 BmtI GCTAGC 225819 332.20 3010 BpmI CTGGAG 1097245 1614.16 619 BpuEI CTTGAG 610746 898.47 1113 BsaAI YACGTR 486205 715.26 1398 BsaHI GRCGYC 456373 671.37 1489 BsaI GGTCTC 374049 550.27 1817 BsaWI WCCGGW 369529 543.62 1839 BseRI GAGGAG 1783345 2623.49 381 BsgI GTGCAG 915544 1346.86 742 BsiEI CGRYCG 173289 254.93 3922 BsiHKAI GWGCWC 1208783 1778.25 562 BsiWI CGTACG 36716 54.01 18514 BsmAI GTCTC 2375011 3493.89 286 BsmBI CGTCTC 339427 499.33 2002 BsmFI GGGAC 1652150 2430.49 411 BsmI GAATGC 485806 714.67 1399 BsoBI CYCGRG 399054 587.05 1703 Bsp1286I GDGCHC 2080861 3061.17 326 BspCNI CTCAG 2829566 4162.59 240 BspDI ATCGAT 132366 194.72 5135 BspEI TCCGGA 103379 152.08 6575 BspHI TCATGA 407172 598.99 1669 BspMI ACCTGC 777072 1143.15 874 BspQI GCTCTTC 146280 215.19 4646 BsrBI CCGCTC 391081 575.32 1738 BsrFI RCCGGY 268990 395.71 2527 BsrGI TGTACA 561767 826.42 1210 BsrI ACTGG 2680650 3943.52 253 BssHII GCGCGC 75824 111.55 8964 BssSI CACGAG 248837 366.07 2731 BstBI TTCGAA 92558 136.16 7344 BstEII GGTNACC 141388 208.00 4807 BstNI CCWGG 2803915 4124.85 242 BstUI CGCG 826660 1216.10 822 BstYI RGATCY 896548 1318.92 758 BstZ17I GTATAC 149270 219.59 4553 Bsu36I CCTNAGG 187658 276.06 3622 BtgI CCRYGG 707171 1040.32 961 BtgZI GCGATG 214631 315.74 3167 BtsCI GGATG 1847077 2717.24 368 ClaI ATCGAT 132366 194.72 5135 CviAII CATG 6186735 9101.34 109 CviKI-1 RGCY 15890629 23376.78 42 CviQI GTAC 3438636 5058.59 197 DdeI CTNAG 4181796 6151.86 162 DpnII GATC 3082209 4534.25 220 DraI TTTAAA 1876688 2760.81 362 EaeI YGGCCR 539857 794.19 1259 EagI CGGCCG 55354 81.43 12280 EarI CTCTTC 936230 1377.29 726 EciI GGCGGA 207817 305.72 3270 Eco53kI GAGCTC 279266 410.83 2434 EcoO109I RGGNCCY 717566 1055.61 947 EcoRI GAATTC 239988 353.05 2832 EcoRV GATATC 181753 267.38 3740 FatI CATG 6186735 9101.34 109 FauI CCCGC 774145 1138.85 878 Fnu4HI GCNGC 3476708 5114.60 195 FokI GGATG 1847077 2717.24 368 FseI GGCCGGCC 2401 3.53 283115 FspI TGCGCA 122224 179.80 5561 HaeII RGCGCY 612869 901.59 1109 HaeIII GGCC 2814107 4139.85 241 HgaI GACGC 796452 1171.66 853 HhaI GCGC 1662366 2445.51 408 HincII GTYRAC 782962 1151.82 868 HindIII AAGCTT 324195 476.92 2096 HinfI GANTC 3495050 5141.59 194 HinP1I GCGC 1662366 2445.51 408 HpaI GTTAAC 255590 376.00 2659 HpaII CCGG 1342090 1974.36 506 HphI GGTGA 2345544 3450.54 289 Hpy188I TCNGA 4874856 7171.43 139 Hpy99I CGWCG 357608 526.08 1900 HpyAV CCTTC 2145034 3155.57 316 HpyCH4III ACNGT 5513805 8111.39 123 HpyCH4IV ACGT 2315028 3405.65 293 HpyCH4V TGCA 7074116 10406.77 96 KasI GGCGCC 100655 148.07 6753 KpnI GGTACC 75176 110.59 9042 MboI GATC 3082209 4534.25 220 MboII GAAGA 3077597 4527.47 220 MfeI CAATTG 234981 345.68 2892 MluCI AATT 8048990 11840.91 84 MluI ACGCGT 46496 68.40 14619 MlyI GAGTC 1743408 2564.74 389 MmeI TCCRAC 691049 1016.61 983 MnlI CCTC 10662695 15685.94 63 MscI TGGCCA 286784 421.89 2370 MseI TTAA 10091623 14845.84 67 MspA1I CMGCKG 949688 1397.09 715 MspI CCGG 1342090 1974.36 506 NaeI GCCGGC 52896 77.82 12850 NarI GGCGCC 100655 148.07 6753 NciI CCSGG 740669 1089.60 917 NcoI CCATGG 407135 598.94 1669 NdeI CATATG 354291 521.20 1918 NgoMIV GCCGGC 52896 77.82 12850 NheI GCTAGC 225819 332.20 3010 NlaIII CATG 6186735 9101.34 109 NmeAIII GCCGAG 184552 271.50 3683 NotI GCGGCCGC 2715 3.99 250372 NruI TCGCGA 24578 36.16 27657 NsiI ATGCAT 526037 773.86 1292 NspI RCATGY 1782193 2621.79 381 PacI TTAATTAA 44352 65.25 15326 PaeR7I CTCGAG 84122 123.75 8080 PciI ACATGT 766390 1127.44 886 PleI GAGTC 1743408 2564.74 389 PluTI GGCGCC 100655 148.07 6753 PmeI GTTTAAAC 30669 45.12 22164 PmlI CACGTG 172395 253.61 3943 PpuMI RGGWCCY 354632 521.70 1916 PsiI TTATAA 867602 1276.33 783 PspGI CCWGG 2803915 4124.85 242 PspOMI GGGCCC 179035 263.38 3796 PspXI VCTCGAGB 26154 38.48 25990 PstI CTGCAG 675559 993.82 1006 PvuI CGATCG 32432 47.71 20959 PvuII CAGCTG 538003 791.46 1263 RsaI GTAC 3438636 5058.59 197 RsrII CGGWCCG 19986 29.40 34011 SacI GAGCTC 279266 410.83 2434 SacII CCGCGG 63743 93.77 10664 SalI GTCGAC 76961 113.22 8832 SapI GCTCTTC 146280 215.19 4646 Sau3AI GATC 3082209 4534.25 220 Sau96I GGNCC 2791647 4106.81 243 SbfI CCTGCAGG 12479 18.36 54472 ScaI AGTACT 401349 590.43 1693 ScrFI CCNGG 3544584 5214.46 191 SexAI ACCWGGT 222983 328.03 3048 SfaNI GCATC 1696283 2495.41 400 SfcI CTRYAG 1730948 2546.41 392 SfoI GGCGCC 100655 148.07 6753 SgrAI CRCCGGYG 10007 14.72 67928 SmaI CCCGGG 112408 165.36 6047 SmlI CTYRAG 978616 1439.65 694 SnaBI TACGTA 96185 141.50 7067 SpeI ACTAGT 263828 388.12 2576 SphI GCATGC 184491 271.41 3684 SrfI GCCCGGGC 3396 5.00 200165 SspI AATATT 1094637 1610.33 620 StuI AGGCCT 306159 450.39 2220 StyD4I CCNGG 3544584 5214.46 191 StyI CCWWGG 861470 1267.31 789 SwaI ATTTAAAT 60474 88.96 11240 TaqI TCGA 1375280 2023.18 494 TfiI GAWTC 1751642 2576.85 388 TseI GCWGC 2727219 4012.03 249 Tsp45I GTSAC 2547652 3747.86 266 TspMI CCCGGG 112408 165.36 6047 TspRI CASTG 4396759 6468.09 154 XbaI TCTAGA 200689 295.23 3387 XhoI CTCGAG 84122 123.75 8080 XmaI CCCGGG 112408 165.36 6047 ZraI GACGTC 160855 236.63 4225