# Morone saxatilis genome, 585.167 Mbp of sequence in 35012 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 90919 155.37 6436 Acc65I GGTACC 76460 130.66 7653 AccI GTMKAC 525740 898.45 1113 AciI CCGC 2044785 3494.36 286 AclI AACGTT 159561 272.68 3667 AcuI CTGAAG 895892 1531.00 653 AfeI AGCGCT 117176 200.24 4993 AflII CTTAAG 218320 373.09 2680 AflIII ACRYGT 911996 1558.52 641 AgeI ACCGGT 60137 102.77 9730 AluI AGCT 5476901 9359.56 106 AlwI GGATC 1121847 1917.14 521 ApaI GGGCCC 94133 160.87 6216 ApaLI GTGCAC 266805 455.95 2193 ApeKI GCWGC 2996214 5120.28 195 ApoI RAATTY 1573363 2688.74 371 AscI GGCGCGCC 644 1.10 908643 AseI ATTAAT 754411 1289.22 775 AsiSI GCGATCGC 578 0.99 1012398 AvaI CYCGRG 243913 416.83 2399 AvaII GGWCC 1011394 1728.39 578 AvrII CCTAGG 51817 88.55 11292 BaeGI GKGCMC 614628 1050.35 952 BamHI GGATCC 119269 203.82 4906 BanI GGYRCC 384382 656.88 1522 BanII GRGCYC 616913 1054.25 948 BbvI GCAGC 2996214 5120.28 195 BccI CCATC 2072767 3542.18 282 BceAI ACGGC 587863 1004.61 995 BciVI GTATCC 260079 444.45 2249 BclI TGATCA 388086 663.21 1507 BcoDI GTCTC 2023671 3458.28 289 BfuAI ACCTGC 638877 1091.79 915 BfuCI GATC 2589427 4425.11 225 BglII AGATCT 258650 442.01 2262 BlpI GCTNAGC 254068 434.18 2303 BmrI ACTGGG 495238 846.32 1181 BmtI GCTAGC 142631 243.74 4102 BpmI CTGGAG 797405 1362.70 733 BpuEI CTTGAG 488120 834.16 1198 BsaAI YACGTR 367809 628.55 1590 BsaHI GRCGYC 268277 458.46 2181 BsaI GGTCTC 322578 551.26 1814 BsaWI WCCGGW 231430 395.49 2528 BseRI GAGGAG 1133262 1936.65 516 BsgI GTGCAG 837652 1431.48 698 BsiEI CGRYCG 110179 188.29 5311 BsiHKAI GWGCWC 977302 1670.13 598 BsiWI CGTACG 24141 41.25 24239 BsmAI GTCTC 2023671 3458.28 289 BsmBI CGTCTC 249292 426.02 2347 BsmFI GGGAC 1156449 1976.27 506 BsmI GAATGC 441787 754.98 1324 BsoBI CYCGRG 243913 416.83 2399 Bsp1286I GDGCHC 1603050 2739.48 365 BspCNI CTCAG 2896949 4950.64 201 BspDI ATCGAT 88621 151.45 6603 BspEI TCCGGA 46924 80.19 12470 BspHI TCATGA 354524 605.85 1650 BspMI ACCTGC 638877 1091.79 915 BspQI GCTCTTC 146191 249.83 4002 BsrBI CCGCTC 191911 327.96 3049 BsrFI RCCGGY 249072 425.64 2349 BsrGI TGTACA 560790 958.34 1043 BsrI ACTGG 2427985 4149.22 241 BssHII GCGCGC 29885 51.07 19580 BssSI CACGAG 165465 282.77 3536 BstBI TTCGAA 55478 94.81 10547 BstEII GGTNACC 131445 224.63 4451 BstNI CCWGG 1841623 3147.18 317 BstUI CGCG 351052 599.92 1666 BstYI RGATCY 731407 1249.91 800 BstZ17I GTATAC 163453 279.33 3580 Bsu36I CCTNAGG 193478 330.64 3024 BtgI CCRYGG 394004 673.32 1485 BtgZI GCGATG 160698 274.62 3641 BtsCI GGATG 2094927 3580.05 279 ClaI ATCGAT 88621 151.45 6603 CviAII CATG 5417868 9258.68 108 CviKI-1 RGCY 14443389 24682.53 40 CviQI GTAC 2748047 4696.18 212 DdeI CTNAG 4066407 6949.14 143 DpnII GATC 2589427 4425.11 225 DraI TTTAAA 1353855 2313.62 432 EaeI YGGCCR 495009 845.93 1182 EagI CGGCCG 36549 62.46 16010 EarI CTCTTC 847341 1448.03 690 EciI GGCGGA 144883 247.59 4038 Eco53kI GAGCTC 244855 418.44 2389 EcoO109I RGGNCCY 509257 870.28 1149 EcoRI GAATTC 198746 339.64 2944 EcoRV GATATC 181518 310.20 3223 FatI CATG 5417868 9258.68 108 FauI CCCGC 478479 817.68 1222 Fnu4HI GCNGC 3490420 5964.83 167 FokI GGATG 2094927 3580.05 279 FseI GGCCGGCC 1932 3.30 302881 FspI TGCGCA 82110 140.32 7126 HaeII RGCGCY 317931 543.32 1840 HaeIII GGCC 2216973 3788.62 263 HgaI GACGC 539145 921.35 1085 HhaI GCGC 877848 1500.17 666 HincII GTYRAC 773835 1322.42 756 HindIII AAGCTT 353973 604.91 1653 HinfI GANTC 3040807 5196.48 192 HinP1I GCGC 877848 1500.17 666 HpaI GTTAAC 243904 416.81 2399 HpaII CCGG 914932 1563.54 639 HphI GGTGA 2119206 3621.54 276 Hpy188I TCNGA 4068445 6952.63 143 Hpy99I CGWCG 240301 410.65 2435 HpyAV CCTTC 2081385 3556.91 281 HpyCH4III ACNGT 5118144 8746.47 114 HpyCH4IV ACGT 1668539 2851.39 350 HpyCH4V TGCA 6929331 11841.64 84 KasI GGCGCC 49974 85.40 11709 KpnI GGTACC 76460 130.66 7653 MboI GATC 2589427 4425.11 225 MboII GAAGA 2991781 5112.70 195 MfeI CAATTG 214771 367.03 2724 MluCI AATT 7120523 12168.37 82 MluI ACGCGT 26433 45.17 22137 MlyI GAGTC 1505333 2572.49 388 MmeI TCCRAC 694684 1187.16 842 MnlI CCTC 9087416 15529.62 64 MscI TGGCCA 293746 501.99 1992 MseI TTAA 8785959 15014.46 66 MspA1I CMGCKG 984877 1683.07 594 MspI CCGG 914932 1563.54 639 NaeI GCCGGC 62949 107.57 9295 NarI GGCGCC 49974 85.40 11709 NciI CCSGG 440921 753.50 1327 NcoI CCATGG 213517 364.88 2740 NdeI CATATG 321800 549.93 1818 NgoMIV GCCGGC 62949 107.57 9295 NheI GCTAGC 142631 243.74 4102 NlaIII CATG 5417868 9258.68 108 NmeAIII GCCGAG 156797 267.95 3732 NotI GCGGCCGC 1605 2.74 364589 NruI TCGCGA 13661 23.35 42834 NsiI ATGCAT 489064 835.77 1196 NspI RCATGY 1635206 2794.43 357 PacI TTAATTAA 47578 81.31 12299 PaeR7I CTCGAG 67486 115.33 8670 PciI ACATGT 579316 990.00 1010 PleI GAGTC 1505333 2572.49 388 PluTI GGCGCC 49974 85.40 11709 PmeI GTTTAAAC 17719 30.28 33024 PmlI CACGTG 112970 193.06 5179 PpuMI RGGWCCY 267590 457.29 2186 PsiI TTATAA 580643 992.27 1007 PspGI CCWGG 1841623 3147.18 317 PspOMI GGGCCC 94133 160.87 6216 PspXI VCTCGAGB 20734 35.43 28222 PstI CTGCAG 772212 1319.64 757 PvuI CGATCG 18903 32.30 30956 PvuII CAGCTG 673462 1150.89 868 RsaI GTAC 2748047 4696.18 212 RsrII CGGWCCG 13239 22.62 44200 SacI GAGCTC 244855 418.44 2389 SacII CCGCGG 28701 49.05 20388 SalI GTCGAC 61061 104.35 9583 SapI GCTCTTC 146191 249.83 4002 Sau3AI GATC 2589427 4425.11 225 Sau96I GGNCC 1924988 3289.64 303 SbfI CCTGCAGG 20056 34.27 29176 ScaI AGTACT 236224 403.69 2477 ScrFI CCNGG 2282544 3900.67 256 SexAI ACCWGGT 120536 205.99 4854 SfaNI GCATC 1695522 2897.50 345 SfcI CTRYAG 1741728 2976.47 335 SfoI GGCGCC 49974 85.40 11709 SgrAI CRCCGGYG 6924 11.83 84512 SmaI CCCGGG 53685 91.74 10900 SmlI CTYRAG 773926 1322.57 756 SnaBI TACGTA 77553 132.53 7545 SpeI ACTAGT 167676 286.54 3489 SphI GCATGC 251689 430.12 2324 SrfI GCCCGGGC 1725 2.95 339226 SspI AATATT 901790 1541.08 648 StuI AGGCCT 237804 406.39 2460 StyD4I CCNGG 2282544 3900.67 256 StyI CCWWGG 612083 1046.00 956 SwaI ATTTAAAT 53337 91.15 10971 TaqI TCGA 1016480 1737.08 575 TfiI GAWTC 1535474 2623.99 381 TseI GCWGC 2996214 5120.28 195 Tsp45I GTSAC 2148863 3672.22 272 TspMI CCCGGG 53685 91.74 10900 TspRI CASTG 4276112 7307.51 136 XbaI TCTAGA 175880 300.56 3327 XhoI CTCGAG 67486 115.33 8670 XmaI CCCGGG 53685 91.74 10900 ZraI GACGTC 90919 155.37 6436