# Leucoraja erinacea genome, 0.011 Mbp of sequence in 13 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 2 174.95 5716 Acc65I GGTACC 0 0.00 - AccI GTMKAC 16 1399.58 714 AciI CCGC 70 6123.16 163 AclI AACGTT 0 0.00 - AcuI CTGAAG 6 524.84 1905 AfeI AGCGCT 0 0.00 - AflII CTTAAG 4 349.90 2858 AflIII ACRYGT 0 0.00 - AgeI ACCGGT 0 0.00 - AluI AGCT 82 7172.85 139 AlwI GGATC 30 2624.21 381 ApaI GGGCCC 4 349.90 2858 ApaLI GTGCAC 0 0.00 - ApeKI GCWGC 32 2799.16 357 ApoI RAATTY 22 1924.42 519 AscI GGCGCGCC 0 0.00 - AseI ATTAAT 24 2099.37 476 AsiSI GCGATCGC 0 0.00 - AvaI CYCGRG 2 174.95 5716 AvaII GGWCC 16 1399.58 714 AvrII CCTAGG 18 1574.53 635 BaeGI GKGCMC 10 874.74 1143 BamHI GGATCC 6 524.84 1905 BanI GGYRCC 16 1399.58 714 BanII GRGCYC 18 1574.53 635 BbvI GCAGC 32 2799.16 357 BccI CCATC 60 5248.43 190 BceAI ACGGC 14 1224.63 816 BciVI GTATCC 2 174.95 5716 BclI TGATCA 8 699.79 1429 BcoDI GTCTC 18 1574.53 635 BfuAI ACCTGC 6 524.84 1905 BfuCI GATC 48 4198.74 238 BglII AGATCT 4 349.90 2858 BlpI GCTNAGC 4 349.90 2858 BmrI ACTGGG 8 699.79 1429 BmtI GCTAGC 6 524.84 1905 BpmI CTGGAG 6 524.84 1905 BpuEI CTTGAG 0 0.00 - BsaAI YACGTR 8 699.79 1429 BsaHI GRCGYC 6 524.84 1905 BsaI GGTCTC 2 174.95 5716 BsaWI WCCGGW 4 349.90 2858 BseRI GAGGAG 28 2449.27 408 BsgI GTGCAG 4 349.90 2858 BsiEI CGRYCG 0 0.00 - BsiHKAI GWGCWC 8 699.79 1429 BsiWI CGTACG 0 0.00 - BsmAI GTCTC 18 1574.53 635 BsmBI CGTCTC 4 349.90 2858 BsmFI GGGAC 16 1399.58 714 BsmI GAATGC 8 699.79 1429 BsoBI CYCGRG 2 174.95 5716 Bsp1286I GDGCHC 26 2274.32 439 BspCNI CTCAG 52 4548.64 219 BspDI ATCGAT 2 174.95 5716 BspEI TCCGGA 0 0.00 - BspHI TCATGA 8 699.79 1429 BspMI ACCTGC 6 524.84 1905 BspQI GCTCTTC 2 174.95 5716 BsrBI CCGCTC 2 174.95 5716 BsrFI RCCGGY 12 1049.69 952 BsrGI TGTACA 2 174.95 5716 BsrI ACTGG 26 2274.32 439 BssHII GCGCGC 0 0.00 - BssSI CACGAG 6 524.84 1905 BstBI TTCGAA 6 524.84 1905 BstEII GGTNACC 2 174.95 5716 BstNI CCWGG 22 1924.42 519 BstUI CGCG 4 349.90 2858 BstYI RGATCY 14 1224.63 816 BstZ17I GTATAC 2 174.95 5716 Bsu36I CCTNAGG 4 349.90 2858 BtgI CCRYGG 18 1574.53 635 BtgZI GCGATG 2 174.95 5716 BtsCI GGATG 68 5948.22 168 ClaI ATCGAT 2 174.95 5716 CviAII CATG 66 5773.27 173 CviKI-1 RGCY 386 33764.87 29 CviQI GTAC 38 3324.00 300 DdeI CTNAG 86 7522.74 132 DpnII GATC 48 4198.74 238 DraI TTTAAA 14 1224.63 816 EaeI YGGCCR 10 874.74 1143 EagI CGGCCG 0 0.00 - EarI CTCTTC 18 1574.53 635 EciI GGCGGA 12 1049.69 952 Eco53kI GAGCTC 6 524.84 1905 EcoO109I RGGNCCY 21 1836.95 544 EcoRI GAATTC 4 349.90 2858 EcoRV GATATC 6 524.84 1905 FatI CATG 66 5773.27 173 FauI CCCGC 16 1399.58 714 Fnu4HI GCNGC 43 3761.37 265 FokI GGATG 68 5948.22 168 FseI GGCCGGCC 0 0.00 - FspI TGCGCA 0 0.00 - HaeII RGCGCY 2 174.95 5716 HaeIII GGCC 63 5510.85 181 HgaI GACGC 10 874.74 1143 HhaI GCGC 4 349.90 2858 HincII GTYRAC 10 874.74 1143 HindIII AAGCTT 4 349.90 2858 HinfI GANTC 54 4723.58 211 HinP1I GCGC 4 349.90 2858 HpaI GTTAAC 0 0.00 - HpaII CCGG 30 2624.21 381 HphI GGTGA 62 5423.37 184 Hpy188I TCNGA 58 5073.48 197 Hpy99I CGWCG 4 349.90 2858 HpyAV CCTTC 60 5248.43 190 HpyCH4III ACNGT 24 2099.37 476 HpyCH4IV ACGT 20 1749.48 571 HpyCH4V TGCA 44 3848.85 259 KasI GGCGCC 0 0.00 - KpnI GGTACC 0 0.00 - MboI GATC 48 4198.74 238 MboII GAAGA 70 6123.16 163 MfeI CAATTG 12 1049.69 952 MluCI AATT 206 18019.59 55 MluI ACGCGT 0 0.00 - MlyI GAGTC 21 1836.95 544 MmeI TCCRAC 22 1924.42 519 MnlI CCTC 249 21780.97 45 MscI TGGCCA 10 874.74 1143 MseI TTAA 216 18894.33 52 MspA1I CMGCKG 10 874.74 1143 MspI CCGG 30 2624.21 381 NaeI GCCGGC 8 699.79 1429 NarI GGCGCC 0 0.00 - NciI CCSGG 8 699.79 1429 NcoI CCATGG 8 699.79 1429 NdeI CATATG 2 174.95 5716 NgoMIV GCCGGC 8 699.79 1429 NheI GCTAGC 6 524.84 1905 NlaIII CATG 66 5773.27 173 NmeAIII GCCGAG 4 349.90 2858 NotI GCGGCCGC 0 0.00 - NruI TCGCGA 0 0.00 - NsiI ATGCAT 0 0.00 - NspI RCATGY 2 174.95 5716 PacI TTAATTAA 0 0.00 - PaeR7I CTCGAG 0 0.00 - PciI ACATGT 0 0.00 - PleI GAGTC 21 1836.95 544 PluTI GGCGCC 0 0.00 - PmeI GTTTAAAC 0 0.00 - PmlI CACGTG 0 0.00 - PpuMI RGGWCCY 8 699.79 1429 PsiI TTATAA 24 2099.37 476 PspGI CCWGG 22 1924.42 519 PspOMI GGGCCC 4 349.90 2858 PspXI VCTCGAGB 0 0.00 - PstI CTGCAG 4 349.90 2858 PvuI CGATCG 0 0.00 - PvuII CAGCTG 4 349.90 2858 RsaI GTAC 38 3324.00 300 RsrII CGGWCCG 0 0.00 - SacI GAGCTC 6 524.84 1905 SacII CCGCGG 0 0.00 - SalI GTCGAC 2 174.95 5716 SapI GCTCTTC 2 174.95 5716 Sau3AI GATC 48 4198.74 238 Sau96I GGNCC 37 3236.53 308 SbfI CCTGCAGG 0 0.00 - ScaI AGTACT 6 524.84 1905 ScrFI CCNGG 30 2624.21 381 SexAI ACCWGGT 0 0.00 - SfaNI GCATC 12 1049.69 952 SfcI CTRYAG 8 699.79 1429 SfoI GGCGCC 0 0.00 - SgrAI CRCCGGYG 0 0.00 - SmaI CCCGGG 0 0.00 - SmlI CTYRAG 4 349.90 2858 SnaBI TACGTA 2 174.95 5716 SpeI ACTAGT 6 524.84 1905 SphI GCATGC 0 0.00 - SrfI GCCCGGGC 0 0.00 - SspI AATATT 14 1224.63 816 StuI AGGCCT 16 1399.58 714 StyD4I CCNGG 30 2624.21 381 StyI CCWWGG 36 3149.06 317 SwaI ATTTAAAT 2 174.95 5716 TaqI TCGA 34 2974.11 336 TfiI GAWTC 33 2886.63 346 TseI GCWGC 32 2799.16 357 Tsp45I GTSAC 12 1049.69 952 TspMI CCCGGG 0 0.00 - TspRI CASTG 22 1924.42 519 XbaI TCTAGA 4 349.90 2858 XhoI CTCGAG 0 0.00 - XmaI CCCGGG 0 0.00 - ZraI GACGTC 2 174.95 5716