# Lepisosteus oculatus genome, 945.862 Mbp of sequence in 1925 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 109600 115.87 8630 Acc65I GGTACC 143570 151.79 6588 AccI GTMKAC 792380 837.73 1193 AciI CCGC 2896670 3062.47 326 AclI AACGTT 254527 269.10 3716 AcuI CTGAAG 1563129 1652.60 605 AfeI AGCGCT 200221 211.68 4724 AflII CTTAAG 389042 411.31 2431 AflIII ACRYGT 1096335 1159.09 862 AgeI ACCGGT 83693 88.48 11301 AluI AGCT 7900280 8352.47 119 AlwI GGATC 1802782 1905.97 524 ApaI GGGCCC 177573 187.74 5326 ApaLI GTGCAC 391938 414.37 2413 ApeKI GCWGC 3809480 4027.52 248 ApoI RAATTY 3134503 3313.91 301 AscI GGCGCGCC 1664 1.76 568426 AseI ATTAAT 1287479 1361.17 734 AsiSI GCGATCGC 1288 1.36 734364 AvaI CYCGRG 431116 455.79 2193 AvaII GGWCC 1527685 1615.13 619 AvrII CCTAGG 138677 146.61 6820 BaeGI GKGCMC 1088197 1150.48 869 BamHI GGATCC 206113 217.91 4589 BanI GGYRCC 697007 736.90 1357 BanII GRGCYC 1131176 1195.92 836 BbvI GCAGC 3809480 4027.52 248 BccI CCATC 2740084 2896.92 345 BceAI ACGGC 789734 834.94 1197 BciVI GTATCC 454063 480.05 2083 BclI TGATCA 561530 593.67 1684 BcoDI GTCTC 2726172 2882.21 346 BfuAI ACCTGC 927165 980.23 1020 BfuCI GATC 4187872 4427.57 225 BglII AGATCT 508378 537.48 1860 BlpI GCTNAGC 363100 383.88 2604 BmrI ACTGGG 910257 962.36 1039 BmtI GCTAGC 137156 145.01 6896 BpmI CTGGAG 1264611 1336.99 747 BpuEI CTTGAG 767035 810.94 1233 BsaAI YACGTR 496735 525.17 1904 BsaHI GRCGYC 396568 419.27 2385 BsaI GGTCTC 566603 599.03 1669 BsaWI WCCGGW 367614 388.66 2572 BseRI GAGGAG 1107231 1170.61 854 BsgI GTGCAG 1256146 1328.04 752 BsiEI CGRYCG 175443 185.48 5391 BsiHKAI GWGCWC 1601618 1693.29 590 BsiWI CGTACG 25680 27.15 36832 BsmAI GTCTC 2726172 2882.21 346 BsmBI CGTCTC 311172 328.98 3039 BsmFI GGGAC 1816543 1920.52 520 BsmI GAATGC 806143 852.28 1173 BsoBI CYCGRG 431116 455.79 2193 Bsp1286I GDGCHC 2849864 3012.98 331 BspCNI CTCAG 3968661 4195.82 238 BspDI ATCGAT 110569 116.90 8554 BspEI TCCGGA 99997 105.72 9458 BspHI TCATGA 522635 552.55 1809 BspMI ACCTGC 927165 980.23 1020 BspQI GCTCTTC 271972 287.54 3477 BsrBI CCGCTC 208823 220.78 4529 BsrFI RCCGGY 368595 389.69 2566 BsrGI TGTACA 985417 1041.82 959 BsrI ACTGG 3894393 4117.30 242 BssHII GCGCGC 53998 57.09 17516 BssSI CACGAG 239466 253.17 3949 BstBI TTCGAA 130798 138.28 7231 BstEII GGTNACC 200948 212.45 4706 BstNI CCWGG 3607195 3813.66 262 BstUI CGCG 725686 767.22 1303 BstYI RGATCY 1336408 1412.90 707 BstZ17I GTATAC 338114 357.47 2797 Bsu36I CCTNAGG 295334 312.24 3202 BtgI CCRYGG 606279 640.98 1560 BtgZI GCGATG 218624 231.14 4326 BtsCI GGATG 2786464 2945.95 339 ClaI ATCGAT 110569 116.90 8554 CviAII CATG 7390335 7813.34 127 CviKI-1 RGCY 21192733 22405.74 44 CviQI GTAC 5010896 5297.70 188 DdeI CTNAG 6052035 6398.44 156 DpnII GATC 4187872 4427.57 225 DraI TTTAAA 2465941 2607.08 383 EaeI YGGCCR 691787 731.38 1367 EagI CGGCCG 78362 82.85 12070 EarI CTCTTC 1234913 1305.60 765 EciI GGCGGA 180457 190.79 5241 Eco53kI GAGCTC 401616 424.60 2355 EcoO109I RGGNCCY 961928 1016.99 983 EcoRI GAATTC 471488 498.47 2006 EcoRV GATATC 272810 288.42 3467 FatI CATG 7390335 7813.34 127 FauI CCCGC 739079 781.38 1279 Fnu4HI GCNGC 4472279 4728.26 211 FokI GGATG 2786464 2945.95 339 FseI GGCCGGCC 3937 4.16 240249 FspI TGCGCA 124637 131.77 7588 HaeII RGCGCY 578991 612.13 1633 HaeIII GGCC 3234419 3419.55 292 HgaI GACGC 692263 731.89 1366 HhaI GCGC 1579138 1669.52 598 HincII GTYRAC 883148 933.70 1071 HindIII AAGCTT 609367 644.25 1552 HinfI GANTC 4589847 4852.56 206 HinP1I GCGC 1579138 1669.52 598 HpaI GTTAAC 344713 364.44 2743 HpaII CCGG 1568059 1657.81 603 HphI GGTGA 2884917 3050.04 327 Hpy188I TCNGA 6140231 6491.68 154 Hpy99I CGWCG 304088 321.49 3110 HpyAV CCTTC 3359233 3551.51 281 HpyCH4III ACNGT 8022552 8481.74 117 HpyCH4IV ACGT 2267751 2397.55 417 HpyCH4V TGCA 10666758 11277.29 88 KasI GGCGCC 104630 110.62 9040 KpnI GGTACC 143570 151.79 6588 MboI GATC 4187872 4427.57 225 MboII GAAGA 4846412 5123.81 195 MfeI CAATTG 450589 476.38 2099 MluCI AATT 13279681 14039.77 71 MluI ACGCGT 47042 49.73 20106 MlyI GAGTC 1992604 2106.65 474 MmeI TCCRAC 771736 815.91 1225 MnlI CCTC 10906124 11530.36 86 MscI TGGCCA 411399 434.95 2299 MseI TTAA 14753472 15597.92 64 MspA1I CMGCKG 1322113 1397.79 715 MspI CCGG 1568059 1657.81 603 NaeI GCCGGC 109695 115.97 8622 NarI GGCGCC 104630 110.62 9040 NciI CCSGG 855829 904.81 1105 NcoI CCATGG 301944 319.23 3132 NdeI CATATG 397602 420.36 2378 NgoMIV GCCGGC 109695 115.97 8622 NheI GCTAGC 137156 145.01 6896 NlaIII CATG 7390335 7813.34 127 NmeAIII GCCGAG 241700 255.53 3913 NotI GCGGCCGC 2617 2.77 361429 NruI TCGCGA 29333 31.01 32245 NsiI ATGCAT 721334 762.62 1311 NspI RCATGY 2044440 2161.46 462 PacI TTAATTAA 85951 90.87 11004 PaeR7I CTCGAG 84675 89.52 11170 PciI ACATGT 686662 725.96 1377 PleI GAGTC 1992604 2106.65 474 PluTI GGCGCC 104630 110.62 9040 PmeI GTTTAAAC 24544 25.95 38537 PmlI CACGTG 159933 169.09 5914 PpuMI RGGWCCY 529597 559.91 1786 PsiI TTATAA 957626 1012.44 987 PspGI CCWGG 3607195 3813.66 262 PspOMI GGGCCC 177573 187.74 5326 PspXI VCTCGAGB 21922 23.18 43146 PstI CTGCAG 1020722 1079.15 926 PvuI CGATCG 34921 36.92 27085 PvuII CAGCTG 925217 978.17 1022 RsaI GTAC 5010896 5297.70 188 RsrII CGGWCCG 21456 22.68 44083 SacI GAGCTC 401616 424.60 2355 SacII CCGCGG 72644 76.80 13020 SalI GTCGAC 47634 50.36 19856 SapI GCTCTTC 271972 287.54 3477 Sau3AI GATC 4187872 4427.57 225 Sau96I GGNCC 2970847 3140.89 318 SbfI CCTGCAGG 29788 31.49 31753 ScaI AGTACT 498806 527.36 1896 ScrFI CCNGG 4463024 4718.47 211 SexAI ACCWGGT 182820 193.28 5173 SfaNI GCATC 2388257 2524.95 396 SfcI CTRYAG 2584183 2732.09 366 SfoI GGCGCC 104630 110.62 9040 SgrAI CRCCGGYG 10386 10.98 91070 SmaI CCCGGG 119308 126.14 7927 SmlI CTYRAG 1240752 1311.77 762 SnaBI TACGTA 104397 110.37 9060 SpeI ACTAGT 267481 282.79 3536 SphI GCATGC 341643 361.20 2768 SrfI GCCCGGGC 5435 5.75 174031 SspI AATATT 1536487 1624.43 615 StuI AGGCCT 325964 344.62 2901 StyD4I CCNGG 4463024 4718.47 211 StyI CCWWGG 1071271 1132.59 882 SwaI ATTTAAAT 94861 100.29 9971 TaqI TCGA 1408226 1488.83 671 TfiI GAWTC 2597243 2745.90 364 TseI GCWGC 3809480 4027.52 248 Tsp45I GTSAC 2715999 2871.45 348 TspMI CCCGGG 119308 126.14 7927 TspRI CASTG 5689222 6014.86 166 XbaI TCTAGA 358591 379.12 2637 XhoI CTCGAG 84675 89.52 11170 XmaI CCCGGG 119308 126.14 7927 ZraI GACGTC 109600 115.87 8630