# Labeotropheus fuelleborni genome, 70.858 Mbp of sequence in 58245 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 13615 192.14 5204 Acc65I GGTACC 16199 228.61 4374 AccI GTMKAC 65372 922.57 1083 AciI CCGC 312575 4411.26 226 AclI AACGTT 19595 276.54 3616 AcuI CTGAAG 115031 1623.39 615 AfeI AGCGCT 17066 240.85 4152 AflII CTTAAG 26756 377.60 2648 AflIII ACRYGT 109248 1541.78 648 AgeI ACCGGT 15034 212.17 4713 AluI AGCT 695909 9821.12 101 AlwI GGATC 186198 2627.75 380 ApaI GGGCCC 18120 255.72 3910 ApaLI GTGCAC 33601 474.20 2108 ApeKI GCWGC 382388 5396.51 185 ApoI RAATTY 205597 2901.52 344 AscI GGCGCGCC 129 1.82 549289 AseI ATTAAT 62689 884.71 1130 AsiSI GCGATCGC 165 2.33 429444 AvaI CYCGRG 51286 723.78 1381 AvaII GGWCC 162740 2296.69 435 AvrII CCTAGG 7956 112.28 8906 BaeGI GKGCMC 87466 1234.38 810 BamHI GGATCC 33924 478.76 2088 BanI GGYRCC 60431 852.84 1172 BanII GRGCYC 87943 1241.11 805 BbvI GCAGC 382388 5396.51 185 BccI CCATC 245504 3464.71 288 BceAI ACGGC 101113 1426.97 700 BciVI GTATCC 33234 469.02 2132 BclI TGATCA 44992 634.96 1574 BcoDI GTCTC 239087 3374.15 296 BfuAI ACCTGC 88499 1248.96 800 BfuCI GATC 356388 5029.58 198 BglII AGATCT 31291 441.60 2264 BlpI GCTNAGC 30201 426.22 2346 BmrI ACTGGG 62671 884.45 1130 BmtI GCTAGC 19754 278.78 3587 BpmI CTGGAG 95883 1353.16 739 BpuEI CTTGAG 57000 804.42 1243 BsaAI YACGTR 54838 773.91 1292 BsaHI GRCGYC 39647 559.52 1787 BsaI GGTCTC 44885 633.45 1578 BsaWI WCCGGW 54906 774.87 1290 BseRI GAGGAG 106068 1496.90 668 BsgI GTGCAG 103887 1466.12 682 BsiEI CGRYCG 24484 345.53 2894 BsiHKAI GWGCWC 124680 1759.57 568 BsiWI CGTACG 4660 65.76 15205 BsmAI GTCTC 239087 3374.15 296 BsmBI CGTCTC 35422 499.90 2000 BsmFI GGGAC 157770 2226.55 449 BsmI GAATGC 52750 744.44 1343 BsoBI CYCGRG 51286 723.78 1381 Bsp1286I GDGCHC 216033 3048.80 327 BspCNI CTCAG 360784 5091.62 196 BspDI ATCGAT 12556 177.20 5643 BspEI TCCGGA 11986 169.15 5911 BspHI TCATGA 40576 572.64 1746 BspMI ACCTGC 88499 1248.96 800 BspQI GCTCTTC 19355 273.15 3660 BsrBI CCGCTC 24836 350.50 2853 BsrFI RCCGGY 51979 733.56 1363 BsrGI TGTACA 49748 702.08 1424 BsrI ACTGG 289682 4088.18 244 BssHII GCGCGC 5869 82.83 12073 BssSI CACGAG 30317 427.85 2337 BstBI TTCGAA 11026 155.61 6426 BstEII GGTNACC 21304 300.66 3326 BstNI CCWGG 255035 3599.22 277 BstUI CGCG 89467 1262.62 792 BstYI RGATCY 110807 1563.78 639 BstZ17I GTATAC 16654 235.03 4254 Bsu36I CCTNAGG 23579 332.76 3005 BtgI CCRYGG 58180 821.07 1217 BtgZI GCGATG 23392 330.12 3029 BtsCI GGATG 240886 3399.54 294 ClaI ATCGAT 12556 177.20 5643 CviAII CATG 609530 8602.09 116 CviKI-1 RGCY 1842171 25997.93 38 CviQI GTAC 312359 4408.22 226 DdeI CTNAG 517671 7305.71 136 DpnII GATC 356388 5029.58 198 DraI TTTAAA 150174 2119.35 471 EaeI YGGCCR 65139 919.28 1087 EagI CGGCCG 7380 104.15 9601 EarI CTCTTC 93916 1325.40 754 EciI GGCGGA 20719 292.40 3419 Eco53kI GAGCTC 32335 456.33 2191 EcoO109I RGGNCCY 82536 1164.80 858 EcoRI GAATTC 27641 390.09 2563 EcoRV GATATC 21877 308.74 3238 FatI CATG 609530 8602.09 116 FauI CCCGC 74962 1057.91 945 Fnu4HI GCNGC 454646 6416.26 155 FokI GGATG 240886 3399.54 294 FseI GGCCGGCC 466 6.58 152056 FspI TGCGCA 14084 198.76 5031 HaeII RGCGCY 46523 656.56 1523 HaeIII GGCC 309919 4373.78 228 HgaI GACGC 81765 1153.92 866 HhaI GCGC 152793 2156.32 463 HincII GTYRAC 93826 1324.13 755 HindIII AAGCTT 48194 680.15 1470 HinfI GANTC 396188 5591.27 178 HinP1I GCGC 152793 2156.32 463 HpaI GTTAAC 30970 437.07 2287 HpaII CCGG 201720 2846.81 351 HphI GGTGA 258644 3650.15 273 Hpy188I TCNGA 505514 7134.15 140 Hpy99I CGWCG 46299 653.40 1530 HpyAV CCTTC 253837 3582.31 279 HpyCH4III ACNGT 554291 7822.52 127 HpyCH4IV ACGT 239062 3373.80 296 HpyCH4V TGCA 803633 11341.40 88 KasI GGCGCC 7629 107.67 9288 KpnI GGTACC 16199 228.61 4374 MboI GATC 356388 5029.58 198 MboII GAAGA 358128 5054.14 197 MfeI CAATTG 23988 338.53 2953 MluCI AATT 758763 10708.16 93 MluI ACGCGT 6580 92.86 10768 MlyI GAGTC 199784 2819.48 354 MmeI TCCRAC 81703 1153.05 867 MnlI CCTC 1014176 14312.72 69 MscI TGGCCA 33642 474.78 2106 MseI TTAA 937439 13229.75 75 MspA1I CMGCKG 139588 1969.96 507 MspI CCGG 201720 2846.81 351 NaeI GCCGGC 11466 161.82 6179 NarI GGCGCC 7629 107.67 9288 NciI CCSGG 102500 1446.55 691 NcoI CCATGG 23889 337.14 2966 NdeI CATATG 33830 477.43 2094 NgoMIV GCCGGC 11466 161.82 6179 NheI GCTAGC 19754 278.78 3587 NlaIII CATG 609530 8602.09 116 NmeAIII GCCGAG 23837 336.40 2972 NotI GCGGCCGC 402 5.67 176264 NruI TCGCGA 4886 68.95 14502 NsiI ATGCAT 47907 676.10 1479 NspI RCATGY 183697 2592.45 385 PacI TTAATTAA 3477 49.07 20379 PaeR7I CTCGAG 11748 165.80 6031 PciI ACATGT 60602 855.26 1169 PleI GAGTC 199784 2819.48 354 PluTI GGCGCC 7629 107.67 9288 PmeI GTTTAAAC 2187 30.86 32399 PmlI CACGTG 19575 276.26 3619 PpuMI RGGWCCY 41704 588.55 1699 PsiI TTATAA 53659 757.27 1320 PspGI CCWGG 255035 3599.22 277 PspOMI GGGCCC 18120 255.72 3910 PspXI VCTCGAGB 3583 50.57 19776 PstI CTGCAG 98740 1393.48 717 PvuI CGATCG 4715 66.54 15028 PvuII CAGCTG 97033 1369.39 730 RsaI GTAC 312359 4408.22 226 RsrII CGGWCCG 4660 65.76 15205 SacI GAGCTC 32335 456.33 2191 SacII CCGCGG 7155 100.98 9903 SalI GTCGAC 14654 206.81 4835 SapI GCTCTTC 19355 273.15 3660 Sau3AI GATC 356388 5029.58 198 Sau96I GGNCC 308250 4350.23 229 SbfI CCTGCAGG 2789 39.36 25406 ScaI AGTACT 26053 367.68 2719 ScrFI CCNGG 357535 5045.77 198 SexAI ACCWGGT 16859 237.93 4203 SfaNI GCATC 216101 3049.76 327 SfcI CTRYAG 191945 2708.85 369 SfoI GGCGCC 7629 107.67 9288 SgrAI CRCCGGYG 1232 17.39 57514 SmaI CCCGGG 14417 203.46 4914 SmlI CTYRAG 95504 1347.82 741 SnaBI TACGTA 9457 133.46 7492 SpeI ACTAGT 18207 256.95 3891 SphI GCATGC 36795 519.28 1925 SrfI GCCCGGGC 391 5.52 181223 SspI AATATT 80551 1136.79 879 StuI AGGCCT 27664 390.41 2561 StyD4I CCNGG 357535 5045.77 198 StyI CCWWGG 84909 1198.29 834 SwaI ATTTAAAT 4630 65.34 15304 TaqI TCGA 169400 2390.68 418 TfiI GAWTC 196404 2771.78 360 TseI GCWGC 382388 5396.51 185 Tsp45I GTSAC 273174 3855.21 259 TspMI CCCGGG 14417 203.46 4914 TspRI CASTG 458095 6464.94 154 XbaI TCTAGA 32839 463.45 2157 XhoI CTCGAG 11748 165.80 6031 XmaI CCCGGG 14417 203.46 4914 ZraI GACGTC 13615 192.14 5204