# Kryptolebias marmoratus genome, 680.349 Mbp of sequence in 3072 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 128613 189.04 5289 Acc65I GGTACC 85857 126.20 7924 AccI GTMKAC 443137 651.34 1535 AciI CCGC 2645217 3888.03 257 AclI AACGTT 218784 321.58 3109 AcuI CTGAAG 1285346 1889.24 529 AfeI AGCGCT 134560 197.78 5056 AflII CTTAAG 203845 299.62 3337 AflIII ACRYGT 967949 1422.72 702 AgeI ACCGGT 76035 111.76 8947 AluI AGCT 6989724 10273.73 97 AlwI GGATC 1388449 2040.79 490 ApaI GGGCCC 85195 125.22 7985 ApaLI GTGCAC 253239 372.22 2686 ApeKI GCWGC 3661576 5381.90 185 ApoI RAATTY 2183169 3208.89 311 AscI GGCGCGCC 1211 1.78 561807 AseI ATTAAT 641867 943.44 1059 AsiSI GCGATCGC 1930 2.84 352512 AvaI CYCGRG 364070 535.12 1868 AvaII GGWCC 1289305 1895.06 527 AvrII CCTAGG 54813 80.57 12412 BaeGI GKGCMC 567231 833.73 1199 BamHI GGATCC 143682 211.19 4735 BanI GGYRCC 435711 640.42 1561 BanII GRGCYC 738052 1084.81 921 BbvI GCAGC 3661576 5381.90 185 BccI CCATC 2582039 3795.17 263 BceAI ACGGC 808767 1188.75 841 BciVI GTATCC 207935 305.63 3271 BclI TGATCA 434674 638.90 1565 BcoDI GTCTC 2237347 3288.53 304 BfuAI ACCTGC 767628 1128.28 886 BfuCI GATC 3224037 4738.80 211 BglII AGATCT 368007 540.91 1848 BlpI GCTNAGC 279950 411.48 2430 BmrI ACTGGG 492828 724.37 1380 BmtI GCTAGC 121158 178.08 5615 BpmI CTGGAG 974399 1432.20 698 BpuEI CTTGAG 483311 710.39 1407 BsaAI YACGTR 374502 550.46 1816 BsaHI GRCGYC 400516 588.69 1698 BsaI GGTCTC 370255 544.21 1837 BsaWI WCCGGW 349499 513.71 1946 BseRI GAGGAG 1278427 1879.07 532 BsgI GTGCAG 841381 1236.69 808 BsiEI CGRYCG 176061 258.78 3864 BsiHKAI GWGCWC 1081137 1589.09 629 BsiWI CGTACG 33476 49.20 20323 BsmAI GTCTC 2237347 3288.53 304 BsmBI CGTCTC 375767 552.31 1810 BsmFI GGGAC 1315491 1933.55 517 BsmI GAATGC 491453 722.35 1384 BsoBI CYCGRG 364070 535.12 1868 Bsp1286I GDGCHC 1709724 2513.01 397 BspCNI CTCAG 3799675 5584.89 179 BspDI ATCGAT 84467 124.15 8054 BspEI TCCGGA 78888 115.95 8624 BspHI TCATGA 464198 682.29 1465 BspMI ACCTGC 767628 1128.28 886 BspQI GCTCTTC 176808 259.88 3847 BsrBI CCGCTC 259342 381.19 2623 BsrFI RCCGGY 316796 465.64 2147 BsrGI TGTACA 451935 664.27 1505 BsrI ACTGG 2412294 3545.67 282 BssHII GCGCGC 52735 77.51 12901 BssSI CACGAG 254974 374.77 2668 BstBI TTCGAA 87446 128.53 7780 BstEII GGTNACC 148729 218.61 4574 BstNI CCWGG 2165113 3182.35 314 BstUI CGCG 570419 838.42 1192 BstYI RGATCY 954395 1402.80 712 BstZ17I GTATAC 98090 144.18 6935 Bsu36I CCTNAGG 237608 349.24 2863 BtgI CCRYGG 443660 652.11 1533 BtgZI GCGATG 177961 261.57 3823 BtsCI GGATG 2453969 3606.92 277 ClaI ATCGAT 84467 124.15 8054 CviAII CATG 5379171 7906.48 126 CviKI-1 RGCY 16568927 24353.55 41 CviQI GTAC 2368181 3480.83 287 DdeI CTNAG 5173278 7603.85 131 DpnII GATC 3224037 4738.80 211 DraI TTTAAA 2109824 3101.09 322 EaeI YGGCCR 522206 767.56 1302 EagI CGGCCG 59553 87.53 11424 EarI CTCTTC 894876 1315.32 760 EciI GGCGGA 197206 289.86 3449 Eco53kI GAGCTC 338262 497.19 2011 EcoO109I RGGNCCY 534866 786.16 1271 EcoRI GAATTC 205451 301.98 3311 EcoRV GATATC 156377 229.85 4350 FatI CATG 5379171 7906.48 126 FauI CCCGC 648897 953.77 1048 Fnu4HI GCNGC 4358107 6405.69 156 FokI GGATG 2453969 3606.92 277 FseI GGCCGGCC 2990 4.39 227541 FspI TGCGCA 88360 129.87 7699 HaeII RGCGCY 416454 612.12 1633 HaeIII GGCC 2283250 3356.00 297 HgaI GACGC 712864 1047.79 954 HhaI GCGC 1169238 1718.58 581 HincII GTYRAC 813237 1195.32 836 HindIII AAGCTT 461151 677.81 1475 HinfI GANTC 3747176 5507.72 181 HinP1I GCGC 1169238 1718.58 581 HpaI GTTAAC 241345 354.74 2818 HpaII CCGG 1307668 1922.05 520 HphI GGTGA 2344013 3445.31 290 Hpy188I TCNGA 5435142 7988.75 125 Hpy99I CGWCG 404982 595.26 1679 HpyAV CCTTC 2461315 3617.72 276 HpyCH4III ACNGT 4561720 6704.97 149 HpyCH4IV ACGT 2061148 3029.54 330 HpyCH4V TGCA 7173731 10544.19 94 KasI GGCGCC 79835 117.34 8521 KpnI GGTACC 85857 126.20 7924 MboI GATC 3224037 4738.80 211 MboII GAAGA 3556386 5227.29 191 MfeI CAATTG 178438 262.27 3812 MluCI AATT 8095608 11899.19 84 MluI ACGCGT 37053 54.46 18361 MlyI GAGTC 1931415 2838.86 352 MmeI TCCRAC 869149 1277.50 782 MnlI CCTC 9825116 14441.28 69 MscI TGGCCA 260915 383.50 2607 MseI TTAA 10317641 15165.21 65 MspA1I CMGCKG 1304065 1916.76 521 MspI CCGG 1307668 1922.05 520 NaeI GCCGGC 85255 125.31 7980 NarI GGCGCC 79835 117.34 8521 NciI CCSGG 635962 934.76 1069 NcoI CCATGG 192971 283.64 3525 NdeI CATATG 242106 355.86 2810 NgoMIV GCCGGC 85255 125.31 7980 NheI GCTAGC 121158 178.08 5615 NlaIII CATG 5379171 7906.48 126 NmeAIII GCCGAG 251247 369.29 2707 NotI GCGGCCGC 2614 3.84 260271 NruI TCGCGA 18963 27.87 35877 NsiI ATGCAT 456360 670.77 1490 NspI RCATGY 1517917 2231.08 448 PacI TTAATTAA 43876 64.49 15506 PaeR7I CTCGAG 100473 147.68 6771 PciI ACATGT 573515 842.97 1186 PleI GAGTC 1931415 2838.86 352 PluTI GGCGCC 79835 117.34 8521 PmeI GTTTAAAC 30550 44.90 22270 PmlI CACGTG 146446 215.25 4645 PpuMI RGGWCCY 317256 466.31 2144 PsiI TTATAA 637519 937.05 1067 PspGI CCWGG 2165113 3182.35 314 PspOMI GGGCCC 85195 125.22 7985 PspXI VCTCGAGB 33190 48.78 20498 PstI CTGCAG 982654 1444.34 692 PvuI CGATCG 33442 49.15 20344 PvuII CAGCTG 919346 1351.28 740 RsaI GTAC 2368181 3480.83 287 RsrII CGGWCCG 32910 48.37 20673 SacI GAGCTC 338262 497.19 2011 SacII CCGCGG 53891 79.21 12624 SalI GTCGAC 73689 108.31 9232 SapI GCTCTTC 176808 259.88 3847 Sau3AI GATC 3224037 4738.80 211 Sau96I GGNCC 2212820 3252.48 307 SbfI CCTGCAGG 32088 47.16 21202 ScaI AGTACT 198109 291.19 3434 ScrFI CCNGG 2801075 4117.11 242 SexAI ACCWGGT 157105 230.92 4330 SfaNI GCATC 1854542 2725.87 366 SfcI CTRYAG 1845806 2713.03 368 SfoI GGCGCC 79835 117.34 8521 SgrAI CRCCGGYG 11936 17.54 56999 SmaI CCCGGG 71189 104.64 9556 SmlI CTYRAG 787629 1157.68 863 SnaBI TACGTA 63017 92.62 10796 SpeI ACTAGT 147592 216.94 4609 SphI GCATGC 207945 305.64 3271 SrfI GCCCGGGC 2443 3.59 278489 SspI AATATT 957294 1407.06 710 StuI AGGCCT 245945 361.50 2766 StyD4I CCNGG 2801075 4117.11 242 StyI CCWWGG 634325 932.35 1072 SwaI ATTTAAAT 64767 95.20 10504 TaqI TCGA 1311399 1927.54 518 TfiI GAWTC 1815761 2668.87 374 TseI GCWGC 3661576 5381.90 185 Tsp45I GTSAC 2237144 3288.23 304 TspMI CCCGGG 71189 104.64 9556 TspRI CASTG 3556773 5227.86 191 XbaI TCTAGA 159745 234.80 4258 XhoI CTCGAG 100473 147.68 6771 XmaI CCCGGG 71189 104.64 9556 ZraI GACGTC 128613 189.04 5289