# Ictalurus punctatus genome, 783.258 Mbp of sequence in 9340 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 164736 210.32 4754 Acc65I GGTACC 112436 143.55 6966 AccI GTMKAC 752385 960.58 1041 AciI CCGC 2850890 3639.78 274 AclI AACGTT 284950 363.80 2748 AcuI CTGAAG 1243580 1587.70 629 AfeI AGCGCT 220658 281.72 3549 AflII CTTAAG 240804 307.44 3252 AflIII ACRYGT 1371750 1751.34 570 AgeI ACCGGT 99555 127.10 7867 AluI AGCT 6436672 8217.82 121 AlwI GGATC 1551312 1980.59 504 ApaI GGGCCC 101756 129.91 7697 ApaLI GTGCAC 380514 485.81 2058 ApeKI GCWGC 2896788 3698.38 270 ApoI RAATTY 2713176 3463.96 288 AscI GGCGCGCC 811 1.04 965793 AseI ATTAAT 1024147 1307.55 764 AsiSI GCGATCGC 2650 3.38 295569 AvaI CYCGRG 439443 561.04 1782 AvaII GGWCC 1200685 1532.94 652 AvrII CCTAGG 101847 130.03 7690 BaeGI GKGCMC 858949 1096.64 911 BamHI GGATCC 143110 182.71 5473 BanI GGYRCC 556720 710.77 1406 BanII GRGCYC 746088 952.54 1049 BbvI GCAGC 2896788 3698.38 270 BccI CCATC 2900216 3702.76 270 BceAI ACGGC 937222 1196.57 835 BciVI GTATCC 314967 402.12 2486 BclI TGATCA 551044 703.53 1421 BcoDI GTCTC 2649389 3382.52 295 BfuAI ACCTGC 731327 933.70 1071 BfuCI GATC 3861501 4930.05 202 BglII AGATCT 388358 495.82 2016 BlpI GCTNAGC 261953 334.44 2990 BmrI ACTGGG 631754 806.57 1239 BmtI GCTAGC 243181 310.47 3220 BpmI CTGGAG 1107852 1414.41 707 BpuEI CTTGAG 659663 842.20 1187 BsaAI YACGTR 697812 890.91 1122 BsaHI GRCGYC 392327 500.89 1996 BsaI GGTCTC 456449 582.76 1715 BsaWI WCCGGW 453453 578.93 1727 BseRI GAGGAG 1029901 1314.89 760 BsgI GTGCAG 985834 1258.63 794 BsiEI CGRYCG 234633 299.56 3338 BsiHKAI GWGCWC 1365909 1743.88 573 BsiWI CGTACG 62369 79.63 12558 BsmAI GTCTC 2649389 3382.52 295 BsmBI CGTCTC 402099 513.37 1947 BsmFI GGGAC 1397103 1783.71 560 BsmI GAATGC 660240 842.94 1186 BsoBI CYCGRG 439443 561.04 1782 Bsp1286I GDGCHC 2145434 2739.11 365 BspCNI CTCAG 3515763 4488.64 222 BspDI ATCGAT 168068 214.58 4660 BspEI TCCGGA 113520 144.93 6899 BspHI TCATGA 550573 702.93 1422 BspMI ACCTGC 731327 933.70 1071 BspQI GCTCTTC 180462 230.40 4340 BsrBI CCGCTC 245626 313.60 3188 BsrFI RCCGGY 319753 408.23 2449 BsrGI TGTACA 772462 986.22 1013 BsrI ACTGG 2954231 3771.72 265 BssHII GCGCGC 94164 120.22 8318 BssSI CACGAG 315921 403.34 2479 BstBI TTCGAA 134855 172.17 5808 BstEII GGTNACC 149324 190.64 5245 BstNI CCWGG 2369630 3025.35 330 BstUI CGCG 915406 1168.72 855 BstYI RGATCY 1041031 1329.10 752 BstZ17I GTATAC 265804 339.36 2946 Bsu36I CCTNAGG 222333 283.86 3522 BtgI CCRYGG 587337 749.86 1333 BtgZI GCGATG 277187 353.89 2825 BtsCI GGATG 2794362 3567.61 280 ClaI ATCGAT 168068 214.58 4660 CviAII CATG 7925462 10118.58 98 CviKI-1 RGCY 16815902 21469.17 46 CviQI GTAC 3955011 5049.43 198 DdeI CTNAG 5094220 6503.88 153 DpnII GATC 3861501 4930.05 202 DraI TTTAAA 1864700 2380.70 420 EaeI YGGCCR 676314 863.46 1158 EagI CGGCCG 62349 79.60 12562 EarI CTCTTC 982300 1254.12 797 EciI GGCGGA 208265 265.90 3760 Eco53kI GAGCTC 343242 438.22 2281 EcoO109I RGGNCCY 557328 711.55 1405 EcoRI GAATTC 377368 481.79 2075 EcoRV GATATC 248945 317.83 3146 FatI CATG 7925462 10118.58 98 FauI CCCGC 604125 771.30 1296 Fnu4HI GCNGC 3510434 4481.83 223 FokI GGATG 2794362 3567.61 280 FseI GGCCGGCC 1928 2.46 406254 FspI TGCGCA 147383 188.17 5314 HaeII RGCGCY 487243 622.07 1607 HaeIII GGCC 2635983 3365.41 297 HgaI GACGC 862833 1101.59 907 HhaI GCGC 1601223 2044.31 489 HincII GTYRAC 806706 1029.94 970 HindIII AAGCTT 451269 576.14 1735 HinfI GANTC 4243107 5417.25 184 HinP1I GCGC 1601223 2044.31 489 HpaI GTTAAC 283796 362.33 2759 HpaII CCGG 1379233 1760.89 567 HphI GGTGA 2637433 3367.26 296 Hpy188I TCNGA 5685174 7258.36 137 Hpy99I CGWCG 544665 695.38 1438 HpyAV CCTTC 2747654 3507.98 285 HpyCH4III ACNGT 6307098 8052.39 124 HpyCH4IV ACGT 3107648 3967.59 252 HpyCH4V TGCA 8409396 10736.43 93 KasI GGCGCC 53424 68.21 14661 KpnI GGTACC 112436 143.55 6966 MboI GATC 3861501 4930.05 202 MboII GAAGA 4003618 5111.49 195 MfeI CAATTG 294104 375.49 2663 MluCI AATT 10050985 12832.28 77 MluI ACGCGT 76358 97.49 10257 MlyI GAGTC 1981436 2529.74 395 MmeI TCCRAC 803532 1025.88 974 MnlI CCTC 10002122 12769.89 78 MscI TGGCCA 389951 497.86 2008 MseI TTAA 11300924 14428.09 69 MspA1I CMGCKG 982432 1254.29 797 MspI CCGG 1379233 1760.89 567 NaeI GCCGGC 64119 81.86 12215 NarI GGCGCC 53424 68.21 14661 NciI CCSGG 611187 780.31 1281 NcoI CCATGG 325817 415.98 2403 NdeI CATATG 418310 534.06 1872 NgoMIV GCCGGC 64119 81.86 12215 NheI GCTAGC 243181 310.47 3220 NlaIII CATG 7925462 10118.58 98 NmeAIII GCCGAG 265513 338.99 2949 NotI GCGGCCGC 1561 1.99 501766 NruI TCGCGA 41076 52.44 19068 NsiI ATGCAT 650891 831.00 1203 NspI RCATGY 2186651 2791.74 358 PacI TTAATTAA 63951 81.65 12247 PaeR7I CTCGAG 142186 181.53 5508 PciI ACATGT 718761 917.66 1089 PleI GAGTC 1981436 2529.74 395 PluTI GGCGCC 53424 68.21 14661 PmeI GTTTAAAC 28797 36.77 27199 PmlI CACGTG 249218 318.18 3142 PpuMI RGGWCCY 315273 402.51 2484 PsiI TTATAA 863154 1102.00 907 PspGI CCWGG 2369630 3025.35 330 PspOMI GGGCCC 101756 129.91 7697 PspXI VCTCGAGB 43383 55.39 18054 PstI CTGCAG 663674 847.32 1180 PvuI CGATCG 71415 91.18 10967 PvuII CAGCTG 639421 816.36 1224 RsaI GTAC 3955011 5049.43 198 RsrII CGGWCCG 27794 35.49 28180 SacI GAGCTC 343242 438.22 2281 SacII CCGCGG 36243 46.27 21611 SalI GTCGAC 81402 103.93 9622 SapI GCTCTTC 180462 230.40 4340 Sau3AI GATC 3861501 4930.05 202 Sau96I GGNCC 2208907 2820.15 354 SbfI CCTGCAGG 16736 21.37 46800 ScaI AGTACT 324357 414.11 2414 ScrFI CCNGG 2980817 3805.66 262 SexAI ACCWGGT 148880 190.08 5261 SfaNI GCATC 2270212 2898.42 345 SfcI CTRYAG 1899043 2424.54 412 SfoI GGCGCC 53424 68.21 14661 SgrAI CRCCGGYG 10523 13.43 74432 SmaI CCCGGG 69596 88.85 11254 SmlI CTYRAG 1042653 1331.17 751 SnaBI TACGTA 130421 166.51 6005 SpeI ACTAGT 225071 287.35 3480 SphI GCATGC 336530 429.65 2327 SrfI GCCCGGGC 2226 2.84 351868 SspI AATATT 1243472 1587.56 629 StuI AGGCCT 268119 342.31 2921 StyD4I CCNGG 2980817 3805.66 262 StyI CCWWGG 910009 1161.83 860 SwaI ATTTAAAT 68296 87.19 11468 TaqI TCGA 2002063 2556.07 391 TfiI GAWTC 2261671 2887.52 346 TseI GCWGC 2896788 3698.38 270 Tsp45I GTSAC 2550927 3256.81 307 TspMI CCCGGG 69596 88.85 11254 TspRI CASTG 4993372 6375.13 156 XbaI TCTAGA 301293 384.67 2599 XhoI CTCGAG 142186 181.53 5508 XmaI CCCGGG 69596 88.85 11254 ZraI GACGTC 164736 210.32 4754