# Esox lucius genome, 904.436 Mbp of sequence in 1519 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 153591 169.82 5888 Acc65I GGTACC 185908 205.55 4864 AccI GTMKAC 972235 1074.96 930 AciI CCGC 3727692 4121.56 242 AclI AACGTT 324602 358.90 2786 AcuI CTGAAG 1325855 1465.95 682 AfeI AGCGCT 158207 174.92 5716 AflII CTTAAG 273386 302.27 3308 AflIII ACRYGT 1399114 1546.95 646 AgeI ACCGGT 155758 172.22 5806 AluI AGCT 6714341 7423.79 134 AlwI GGATC 1939030 2143.91 466 ApaI GGGCCC 254740 281.66 3550 ApaLI GTGCAC 363889 402.34 2485 ApeKI GCWGC 3119758 3449.40 289 ApoI RAATTY 2164476 2393.18 417 AscI GGCGCGCC 1468 1.62 616100 AseI ATTAAT 943026 1042.67 959 AsiSI GCGATCGC 939 1.04 963190 AvaI CYCGRG 467549 516.95 1934 AvaII GGWCC 2220243 2454.84 407 AvrII CCTAGG 181634 200.83 4979 BaeGI GKGCMC 1095156 1210.87 825 BamHI GGATCC 221436 244.83 4084 BanI GGYRCC 812109 897.92 1113 BanII GRGCYC 1052668 1163.89 859 BbvI GCAGC 3119758 3449.40 289 BccI CCATC 3684733 4074.07 245 BceAI ACGGC 1119849 1238.17 807 BciVI GTATCC 434021 479.88 2083 BclI TGATCA 588810 651.02 1536 BcoDI GTCTC 3403728 3763.37 265 BfuAI ACCTGC 884695 978.17 1022 BfuCI GATC 4212557 4657.66 214 BglII AGATCT 470232 519.92 1923 BlpI GCTNAGC 280797 310.47 3220 BmrI ACTGGG 936639 1035.61 965 BmtI GCTAGC 312700 345.74 2892 BpmI CTGGAG 1264060 1397.62 715 BpuEI CTTGAG 710481 785.55 1272 BsaAI YACGTR 650386 719.11 1390 BsaHI GRCGYC 469014 518.57 1928 BsaI GGTCTC 693219 766.47 1304 BsaWI WCCGGW 586665 648.65 1541 BseRI GAGGAG 1608367 1778.31 562 BsgI GTGCAG 987914 1092.30 915 BsiEI CGRYCG 253071 279.81 3573 BsiHKAI GWGCWC 1260618 1393.82 717 BsiWI CGTACG 46997 51.96 19244 BsmAI GTCTC 3403728 3763.37 265 BsmBI CGTCTC 418321 462.52 2162 BsmFI GGGAC 2494299 2757.85 362 BsmI GAATGC 834854 923.07 1083 BsoBI CYCGRG 467549 516.95 1934 Bsp1286I GDGCHC 2491094 2754.31 363 BspCNI CTCAG 3934901 4350.67 229 BspDI ATCGAT 128347 141.91 7046 BspEI TCCGGA 144377 159.63 6264 BspHI TCATGA 550292 608.44 1643 BspMI ACCTGC 884695 978.17 1022 BspQI GCTCTTC 224277 247.97 4032 BsrBI CCGCTC 276838 306.09 3267 BsrFI RCCGGY 547407 605.25 1652 BsrGI TGTACA 843549 932.68 1072 BsrI ACTGG 4039702 4466.54 223 BssHII GCGCGC 71242 78.77 12695 BssSI CACGAG 240153 265.53 3766 BstBI TTCGAA 127830 141.34 7075 BstEII GGTNACC 273210 302.08 3310 BstNI CCWGG 3996868 4419.18 226 BstUI CGCG 861425 952.44 1049 BstYI RGATCY 1323370 1463.20 683 BstZ17I GTATAC 285275 315.42 3170 Bsu36I CCTNAGG 324085 358.33 2790 BtgI CCRYGG 884019 977.43 1023 BtgZI GCGATG 266791 294.98 3390 BtsCI GGATG 3801260 4202.91 237 ClaI ATCGAT 128347 141.91 7046 CviAII CATG 8836407 9770.07 102 CviKI-1 RGCY 22234061 24583.34 40 CviQI GTAC 4631961 5121.38 195 DdeI CTNAG 5916667 6541.83 152 DpnII GATC 4212557 4657.66 214 DraI TTTAAA 1500761 1659.33 602 EaeI YGGCCR 1046497 1157.07 864 EagI CGGCCG 92828 102.64 9743 EarI CTCTTC 1282323 1417.81 705 EciI GGCGGA 286078 316.31 3161 Eco53kI GAGCTC 298719 330.28 3027 EcoO109I RGGNCCY 1246548 1378.26 725 EcoRI GAATTC 341340 377.41 2649 EcoRV GATATC 270729 299.33 3340 FatI CATG 8836407 9770.07 102 FauI CCCGC 890016 984.06 1016 Fnu4HI GCNGC 3935653 4351.50 229 FokI GGATG 3801260 4202.91 237 FseI GGCCGGCC 4798 5.30 188502 FspI TGCGCA 150028 165.88 6028 HaeII RGCGCY 492971 545.06 1834 HaeIII GGCC 4759343 5262.22 190 HgaI GACGC 873852 966.18 1034 HhaI GCGC 1600372 1769.47 565 HincII GTYRAC 1274224 1408.86 709 HindIII AAGCTT 391739 433.13 2308 HinfI GANTC 4555306 5036.62 198 HinP1I GCGC 1600372 1769.47 565 HpaI GTTAAC 386581 427.43 2339 HpaII CCGG 2330879 2577.16 388 HphI GGTGA 3588926 3968.14 252 Hpy188I TCNGA 6093417 6737.25 148 Hpy99I CGWCG 463042 511.97 1953 HpyAV CCTTC 3563723 3940.27 253 HpyCH4III ACNGT 7654474 8463.25 118 HpyCH4IV ACGT 3016752 3335.51 299 HpyCH4V TGCA 9265414 10244.41 97 KasI GGCGCC 96225 106.39 9399 KpnI GGTACC 185908 205.55 4864 MboI GATC 4212557 4657.66 214 MboII GAAGA 4471347 4943.79 202 MfeI CAATTG 543124 600.51 1665 MluCI AATT 10639430 11763.60 85 MluI ACGCGT 68827 76.10 13140 MlyI GAGTC 2131554 2356.78 424 MmeI TCCRAC 1142832 1263.58 791 MnlI CCTC 14288392 15798.12 63 MscI TGGCCA 625120 691.17 1446 MseI TTAA 11044490 12211.46 81 MspA1I CMGCKG 1171476 1295.26 772 MspI CCGG 2330879 2577.16 388 NaeI GCCGGC 144070 159.29 6277 NarI GGCGCC 96225 106.39 9399 NciI CCSGG 1289062 1425.27 701 NcoI CCATGG 471166 520.95 1919 NdeI CATATG 450135 497.70 2009 NgoMIV GCCGGC 144070 159.29 6277 NheI GCTAGC 312700 345.74 2892 NlaIII CATG 8836407 9770.07 102 NmeAIII GCCGAG 235966 260.90 3832 NotI GCGGCCGC 3529 3.90 256286 NruI TCGCGA 38891 43.00 23255 NsiI ATGCAT 712842 788.16 1268 NspI RCATGY 2338539 2585.63 386 PacI TTAATTAA 48405 53.52 18684 PaeR7I CTCGAG 75620 83.61 11960 PciI ACATGT 812014 897.81 1113 PleI GAGTC 2131554 2356.78 424 PluTI GGCGCC 96225 106.39 9399 PmeI GTTTAAAC 22245 24.60 40657 PmlI CACGTG 218970 242.11 4130 PpuMI RGGWCCY 669581 740.33 1350 PsiI TTATAA 792150 875.85 1141 PspGI CCWGG 3996868 4419.18 226 PspOMI GGGCCC 254740 281.66 3550 PspXI VCTCGAGB 22099 24.43 40926 PstI CTGCAG 753075 832.65 1200 PvuI CGATCG 39197 43.34 23074 PvuII CAGCTG 721757 798.02 1253 RsaI GTAC 4631961 5121.38 195 RsrII CGGWCCG 35173 38.89 25713 SacI GAGCTC 298719 330.28 3027 SacII CCGCGG 69580 76.93 12998 SalI GTCGAC 89079 98.49 10153 SapI GCTCTTC 224277 247.97 4032 Sau3AI GATC 4212557 4657.66 214 Sau96I GGNCC 4431614 4899.86 204 SbfI CCTGCAGG 18487 20.44 48922 ScaI AGTACT 370301 409.43 2442 ScrFI CCNGG 5285930 5844.45 171 SexAI ACCWGGT 340846 376.86 2653 SfaNI GCATC 2620358 2897.23 345 SfcI CTRYAG 2253635 2491.76 401 SfoI GGCGCC 96225 106.39 9399 SgrAI CRCCGGYG 13173 14.56 68658 SmaI CCCGGG 182708 202.01 4950 SmlI CTYRAG 1059487 1171.43 853 SnaBI TACGTA 133852 147.99 6756 SpeI ACTAGT 292187 323.06 3095 SphI GCATGC 356635 394.32 2536 SrfI GCCCGGGC 4358 4.82 207534 SspI AATATT 1245592 1377.20 726 StuI AGGCCT 461415 510.17 1960 StyD4I CCNGG 5285930 5844.45 171 StyI CCWWGG 1374862 1520.13 657 SwaI ATTTAAAT 64015 70.78 14128 TaqI TCGA 1716794 1898.19 526 TfiI GAWTC 2423752 2679.85 373 TseI GCWGC 3119758 3449.40 289 Tsp45I GTSAC 3203826 3542.35 282 TspMI CCCGGG 182708 202.01 4950 TspRI CASTG 5813226 6427.46 155 XbaI TCTAGA 319303 353.04 2832 XhoI CTCGAG 75620 83.61 11960 XmaI CCCGGG 182708 202.01 4950 ZraI GACGTC 153591 169.82 5888