# Dicentrarchus labrax genome, 675.917 Mbp of sequence in 25 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 108845 161.03 6209 Acc65I GGTACC 90349 133.67 7481 AccI GTMKAC 596563 882.60 1133 AciI CCGC 2355183 3484.43 286 AclI AACGTT 200308 296.35 3374 AcuI CTGAAG 1051951 1556.33 642 AfeI AGCGCT 133964 198.20 5045 AflII CTTAAG 251657 372.32 2685 AflIII ACRYGT 1031755 1526.45 655 AgeI ACCGGT 74866 110.76 9028 AluI AGCT 6254433 9253.25 108 AlwI GGATC 1326860 1963.05 509 ApaI GGGCCC 108045 159.85 6255 ApaLI GTGCAC 309332 457.65 2185 ApeKI GCWGC 3405752 5038.71 198 ApoI RAATTY 1784432 2640.02 378 AscI GGCGCGCC 633 0.94 1067799 AseI ATTAAT 879948 1301.86 768 AsiSI GCGATCGC 898 1.33 752691 AvaI CYCGRG 295762 437.57 2285 AvaII GGWCC 1215704 1798.60 555 AvrII CCTAGG 72265 106.91 9353 BaeGI GKGCMC 703875 1041.36 960 BamHI GGATCC 141784 209.77 4767 BanI GGYRCC 443593 656.28 1523 BanII GRGCYC 715930 1059.20 944 BbvI GCAGC 3405752 5038.71 198 BccI CCATC 2394644 3542.81 282 BceAI ACGGC 678401 1003.67 996 BciVI GTATCC 293979 434.93 2299 BclI TGATCA 461624 682.96 1464 BcoDI GTCTC 2408632 3563.50 280 BfuAI ACCTGC 737736 1091.46 916 BfuCI GATC 3028619 4480.76 223 BglII AGATCT 297055 439.48 2275 BlpI GCTNAGC 283538 419.49 2383 BmrI ACTGGG 562773 832.61 1201 BmtI GCTAGC 178572 264.19 3785 BpmI CTGGAG 922812 1365.27 732 BpuEI CTTGAG 550247 814.07 1228 BsaAI YACGTR 434774 643.24 1554 BsaHI GRCGYC 318628 471.40 2121 BsaI GGTCTC 389262 575.90 1736 BsaWI WCCGGW 287161 424.85 2353 BseRI GAGGAG 1351668 1999.75 500 BsgI GTGCAG 945919 1399.46 714 BsiEI CGRYCG 135661 200.71 4982 BsiHKAI GWGCWC 1124047 1663.00 601 BsiWI CGTACG 38188 56.50 17699 BsmAI GTCTC 2408632 3563.50 280 BsmBI CGTCTC 294629 435.90 2294 BsmFI GGGAC 1354975 2004.65 498 BsmI GAATGC 493121 729.56 1370 BsoBI CYCGRG 295762 437.57 2285 Bsp1286I GDGCHC 1834337 2713.85 368 BspCNI CTCAG 3421214 5061.59 197 BspDI ATCGAT 106135 157.02 6368 BspEI TCCGGA 56026 82.89 12064 BspHI TCATGA 400605 592.68 1687 BspMI ACCTGC 737736 1091.46 916 BspQI GCTCTTC 171572 253.84 3939 BsrBI CCGCTC 219479 324.71 3079 BsrFI RCCGGY 293731 434.57 2301 BsrGI TGTACA 650016 961.68 1039 BsrI ACTGG 2780773 4114.07 243 BssHII GCGCGC 35330 52.27 19131 BssSI CACGAG 187619 277.58 3602 BstBI TTCGAA 62591 92.60 10798 BstEII GGTNACC 152069 224.98 4444 BstNI CCWGG 2114263 3127.99 319 BstUI CGCG 411400 608.65 1642 BstYI RGATCY 854604 1264.36 790 BstZ17I GTATAC 183140 270.95 3690 Bsu36I CCTNAGG 226254 334.74 2987 BtgI CCRYGG 467290 691.34 1446 BtgZI GCGATG 180015 266.33 3754 BtsCI GGATG 2400412 3551.34 281 ClaI ATCGAT 106135 157.02 6368 CviAII CATG 6113771 9045.15 110 CviKI-1 RGCY 16568397 24512.47 40 CviQI GTAC 3197760 4730.99 211 DdeI CTNAG 4736586 7007.64 142 DpnII GATC 3028619 4480.76 223 DraI TTTAAA 1527005 2259.16 442 EaeI YGGCCR 570621 844.22 1184 EagI CGGCCG 44871 66.39 15063 EarI CTCTTC 974352 1441.53 693 EciI GGCGGA 167699 248.11 4030 Eco53kI GAGCTC 292138 432.21 2313 EcoO109I RGGNCCY 602906 891.98 1121 EcoRI GAATTC 229904 340.14 2939 EcoRV GATATC 208277 308.14 3245 FatI CATG 6113771 9045.15 110 FauI CCCGC 557620 824.98 1212 Fnu4HI GCNGC 3973236 5878.29 170 FokI GGATG 2400412 3551.34 281 FseI GGCCGGCC 2124 3.14 318228 FspI TGCGCA 92251 136.48 7326 HaeII RGCGCY 387197 572.85 1745 HaeIII GGCC 2529078 3741.70 267 HgaI GACGC 614160 908.63 1100 HhaI GCGC 1019858 1508.85 662 HincII GTYRAC 885090 1309.47 763 HindIII AAGCTT 401810 594.47 1682 HinfI GANTC 3518384 5205.35 192 HinP1I GCGC 1019858 1508.85 662 HpaI GTTAAC 286899 424.46 2355 HpaII CCGG 1124459 1663.60 601 HphI GGTGA 2430766 3596.25 278 Hpy188I TCNGA 4766103 7051.31 141 Hpy99I CGWCG 285628 422.58 2366 HpyAV CCTTC 2381497 3523.36 283 HpyCH4III ACNGT 5938463 8785.79 113 HpyCH4IV ACGT 1962861 2904.00 344 HpyCH4V TGCA 7778201 11507.63 86 KasI GGCGCC 59845 88.54 11294 KpnI GGTACC 90349 133.67 7481 MboI GATC 3028619 4480.76 223 MboII GAAGA 3429532 5073.89 197 MfeI CAATTG 241539 357.35 2798 MluCI AATT 8055678 11918.14 83 MluI ACGCGT 32238 47.70 20966 MlyI GAGTC 1762274 2607.23 383 MmeI TCCRAC 815135 1205.97 829 MnlI CCTC 10519958 15563.98 64 MscI TGGCCA 335466 496.31 2014 MseI TTAA 9971843 14753.06 67 MspA1I CMGCKG 1131420 1673.90 597 MspI CCGG 1124459 1663.60 601 NaeI GCCGGC 72241 106.88 9356 NarI GGCGCC 59845 88.54 11294 NciI CCSGG 559757 828.14 1207 NcoI CCATGG 253630 375.24 2664 NdeI CATATG 359043 531.19 1882 NgoMIV GCCGGC 72241 106.88 9356 NheI GCTAGC 178572 264.19 3785 NlaIII CATG 6113771 9045.15 110 NmeAIII GCCGAG 181198 268.08 3730 NotI GCGGCCGC 2040 3.02 331331 NruI TCGCGA 17669 26.14 38254 NsiI ATGCAT 542525 802.65 1245 NspI RCATGY 1822166 2695.84 370 PacI TTAATTAA 53340 78.92 12671 PaeR7I CTCGAG 77610 114.82 8709 PciI ACATGT 652802 965.80 1035 PleI GAGTC 1762274 2607.23 383 PluTI GGCGCC 59845 88.54 11294 PmeI GTTTAAAC 19947 29.51 33885 PmlI CACGTG 130252 192.70 5189 PpuMI RGGWCCY 319819 473.16 2113 PsiI TTATAA 666133 985.52 1014 PspGI CCWGG 2114263 3127.99 319 PspOMI GGGCCC 108045 159.85 6255 PspXI VCTCGAGB 23824 35.25 28371 PstI CTGCAG 894885 1323.96 755 PvuI CGATCG 22153 32.77 30511 PvuII CAGCTG 767552 1135.57 880 RsaI GTAC 3197760 4730.99 211 RsrII CGGWCCG 17792 26.32 37989 SacI GAGCTC 292138 432.21 2313 SacII CCGCGG 34608 51.20 19530 SalI GTCGAC 70004 103.57 9655 SapI GCTCTTC 171572 253.84 3939 Sau3AI GATC 3028619 4480.76 223 Sau96I GGNCC 2262549 3347.38 298 SbfI CCTGCAGG 22767 33.68 29688 ScaI AGTACT 276546 409.14 2444 ScrFI CCNGG 2674020 3956.14 252 SexAI ACCWGGT 140481 207.84 4811 SfaNI GCATC 1905587 2819.26 354 SfcI CTRYAG 2036579 3013.06 331 SfoI GGCGCC 59845 88.54 11294 SgrAI CRCCGGYG 8350 12.35 80948 SmaI CCCGGG 71243 105.40 9487 SmlI CTYRAG 879514 1301.22 768 SnaBI TACGTA 100206 148.25 6745 SpeI ACTAGT 191132 282.77 3536 SphI GCATGC 271415 401.55 2490 SrfI GCCCGGGC 1890 2.80 357628 SspI AATATT 1033479 1529.00 654 StuI AGGCCT 277800 411.00 2433 StyD4I CCNGG 2674020 3956.14 252 StyI CCWWGG 719400 1064.33 939 SwaI ATTTAAAT 58580 86.67 11538 TaqI TCGA 1173554 1736.24 575 TfiI GAWTC 1756110 2598.11 384 TseI GCWGC 3405752 5038.71 198 Tsp45I GTSAC 2455851 3633.36 275 TspMI CCCGGG 71243 105.40 9487 TspRI CASTG 4926523 7288.65 137 XbaI TCTAGA 216517 320.33 3121 XhoI CTCGAG 77610 114.82 8709 XmaI CCCGGG 71243 105.40 9487 ZraI GACGTC 108845 161.03 6209