# Cynoglossus semilaevis genome, 470.183 Mbp of sequence in 29642 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 142261 302.57 3305 Acc65I GGTACC 69605 148.04 6755 AccI GTMKAC 425992 906.01 1103 AciI CCGC 1923627 4091.23 244 AclI AACGTT 192962 410.40 2436 AcuI CTGAAG 759794 1615.95 618 AfeI AGCGCT 93538 198.94 5026 AflII CTTAAG 124586 264.97 3773 AflIII ACRYGT 867095 1844.17 542 AgeI ACCGGT 62542 133.02 7517 AluI AGCT 3624115 7707.89 129 AlwI GGATC 863404 1836.32 544 ApaI GGGCCC 62398 132.71 7535 ApaLI GTGCAC 180643 384.20 2602 ApeKI GCWGC 2478298 5270.92 189 ApoI RAATTY 1288276 2739.95 364 AscI GGCGCGCC 447 0.95 1051863 AseI ATTAAT 525175 1116.96 895 AsiSI GCGATCGC 688 1.46 683405 AvaI CYCGRG 221341 470.76 2124 AvaII GGWCC 947854 2015.93 496 AvrII CCTAGG 42270 89.90 11123 BaeGI GKGCMC 414742 882.09 1133 BamHI GGATCC 85763 182.40 5482 BanI GGYRCC 312805 665.28 1503 BanII GRGCYC 432368 919.57 1087 BbvI GCAGC 2478298 5270.92 189 BccI CCATC 1726011 3670.94 272 BceAI ACGGC 705545 1500.58 666 BciVI GTATCC 159398 339.01 2949 BclI TGATCA 286257 608.82 1642 BcoDI GTCTC 1669235 3550.18 281 BfuAI ACCTGC 505126 1074.32 930 BfuCI GATC 2033696 4325.33 231 BglII AGATCT 183572 390.43 2561 BlpI GCTNAGC 166924 355.02 2816 BmrI ACTGGG 390501 830.53 1204 BmtI GCTAGC 77012 163.79 6105 BpmI CTGGAG 708639 1507.16 663 BpuEI CTTGAG 278615 592.57 1687 BsaAI YACGTR 422153 897.85 1113 BsaHI GRCGYC 346252 736.42 1357 BsaI GGTCTC 274500 583.82 1712 BsaWI WCCGGW 227495 483.84 2066 BseRI GAGGAG 1047461 2227.77 448 BsgI GTGCAG 655393 1393.91 717 BsiEI CGRYCG 164485 349.83 2858 BsiHKAI GWGCWC 667844 1420.39 704 BsiWI CGTACG 41430 88.11 11348 BsmAI GTCTC 1669235 3550.18 281 BsmBI CGTCTC 302928 644.28 1552 BsmFI GGGAC 915540 1947.20 513 BsmI GAATGC 250804 533.42 1874 BsoBI CYCGRG 221341 470.76 2124 Bsp1286I GDGCHC 1093369 2325.41 430 BspCNI CTCAG 2322500 4939.57 202 BspDI ATCGAT 79849 169.83 5888 BspEI TCCGGA 48737 103.66 9647 BspHI TCATGA 261644 556.47 1797 BspMI ACCTGC 505126 1074.32 930 BspQI GCTCTTC 112077 238.37 4195 BsrBI CCGCTC 174059 370.19 2701 BsrFI RCCGGY 220289 468.52 2134 BsrGI TGTACA 387692 824.56 1212 BsrI ACTGG 1891059 4021.97 248 BssHII GCGCGC 24973 53.11 18827 BssSI CACGAG 174505 371.14 2694 BstBI TTCGAA 54419 115.74 8640 BstEII GGTNACC 115434 245.51 4073 BstNI CCWGG 1745074 3711.48 269 BstUI CGCG 412611 877.55 1139 BstYI RGATCY 519949 1105.84 904 BstZ17I GTATAC 102252 217.47 4598 Bsu36I CCTNAGG 177019 376.49 2656 BtgI CCRYGG 425319 904.58 1105 BtgZI GCGATG 145786 310.06 3225 BtsCI GGATG 1592251 3386.45 295 ClaI ATCGAT 79849 169.83 5888 CviAII CATG 3705294 7880.54 126 CviKI-1 RGCY 10157608 21603.53 46 CviQI GTAC 2274339 4837.14 206 DdeI CTNAG 3193548 6792.14 147 DpnII GATC 2033696 4325.33 231 DraI TTTAAA 1162334 2472.09 404 EaeI YGGCCR 407150 865.94 1154 EagI CGGCCG 53448 113.67 8797 EarI CTCTTC 655657 1394.47 717 EciI GGCGGA 126089 268.17 3728 Eco53kI GAGCTC 178544 379.73 2633 EcoO109I RGGNCCY 341136 725.54 1378 EcoRI GAATTC 175072 372.35 2685 EcoRV GATATC 106204 225.88 4427 FatI CATG 3705294 7880.54 126 FauI CCCGC 426864 907.87 1101 Fnu4HI GCNGC 2957698 6290.53 158 FokI GGATG 1592251 3386.45 295 FseI GGCCGGCC 1663 3.54 282731 FspI TGCGCA 57119 121.48 8231 HaeII RGCGCY 295980 629.50 1588 HaeIII GGCC 1788945 3804.79 262 HgaI GACGC 597299 1270.35 787 HhaI GCGC 758552 1613.31 619 HincII GTYRAC 736762 1566.97 638 HindIII AAGCTT 177627 377.78 2647 HinfI GANTC 2578349 5483.72 182 HinP1I GCGC 758552 1613.31 619 HpaI GTTAAC 185123 393.73 2539 HpaII CCGG 876488 1864.14 536 HphI GGTGA 1885761 4010.70 249 Hpy188I TCNGA 3379106 7186.79 139 Hpy99I CGWCG 387229 823.57 1214 HpyAV CCTTC 1724452 3667.62 272 HpyCH4III ACNGT 4276398 9095.18 109 HpyCH4IV ACGT 2042436 4343.92 230 HpyCH4V TGCA 4393537 9344.32 107 KasI GGCGCC 49944 106.22 9414 KpnI GGTACC 69605 148.04 6755 MboI GATC 2033696 4325.33 231 MboII GAAGA 2576513 5479.81 182 MfeI CAATTG 149701 318.39 3140 MluCI AATT 5331683 11339.60 88 MluI ACGCGT 32179 68.44 14611 MlyI GAGTC 1366844 2907.05 343 MmeI TCCRAC 634057 1348.53 741 MnlI CCTC 7165272 15239.33 65 MscI TGGCCA 196400 417.71 2394 MseI TTAA 6506274 13837.76 72 MspA1I CMGCKG 825545 1755.80 569 MspI CCGG 876488 1864.14 536 NaeI GCCGGC 48107 102.32 9773 NarI GGCGCC 49944 106.22 9414 NciI CCSGG 448992 954.93 1047 NcoI CCATGG 162738 346.12 2889 NdeI CATATG 194821 414.35 2413 NgoMIV GCCGGC 48107 102.32 9773 NheI GCTAGC 77012 163.79 6105 NlaIII CATG 3705294 7880.54 126 NmeAIII GCCGAG 152488 324.32 3083 NotI GCGGCCGC 2227 4.74 211128 NruI TCGCGA 19572 41.63 24023 NsiI ATGCAT 253123 538.35 1857 NspI RCATGY 1030779 2192.29 456 PacI TTAATTAA 38608 82.11 12178 PaeR7I CTCGAG 48886 103.97 9617 PciI ACATGT 463481 985.75 1014 PleI GAGTC 1366844 2907.05 343 PluTI GGCGCC 49944 106.22 9414 PmeI GTTTAAAC 14660 31.18 32072 PmlI CACGTG 153538 326.55 3062 PpuMI RGGWCCY 195367 415.51 2406 PsiI TTATAA 404399 860.09 1162 PspGI CCWGG 1745074 3711.48 269 PspOMI GGGCCC 62398 132.71 7535 PspXI VCTCGAGB 15214 32.36 30904 PstI CTGCAG 662324 1408.65 709 PvuI CGATCG 26469 56.30 17763 PvuII CAGCTG 517902 1101.49 907 RsaI GTAC 2274339 4837.14 206 RsrII CGGWCCG 20972 44.60 22419 SacI GAGCTC 178544 379.73 2633 SacII CCGCGG 46705 99.33 10067 SalI GTCGAC 85337 181.50 5509 SapI GCTCTTC 112077 238.37 4195 Sau3AI GATC 2033696 4325.33 231 Sau96I GGNCC 1704218 3624.59 275 SbfI CCTGCAGG 20071 42.69 23425 ScaI AGTACT 216849 461.20 2168 ScrFI CCNGG 2194066 4666.41 214 SexAI ACCWGGT 142467 303.00 3300 SfaNI GCATC 1147384 2440.29 409 SfcI CTRYAG 1357515 2887.21 346 SfoI GGCGCC 49944 106.22 9414 SgrAI CRCCGGYG 8363 17.79 56221 SmaI CCCGGG 62792 133.55 7487 SmlI CTYRAG 452087 961.51 1040 SnaBI TACGTA 85722 182.32 5484 SpeI ACTAGT 123776 263.25 3798 SphI GCATGC 104282 221.79 4508 SrfI GCCCGGGC 1292 2.75 363918 SspI AATATT 701713 1492.43 670 StuI AGGCCT 156336 332.50 3007 StyD4I CCNGG 2194066 4666.41 214 StyI CCWWGG 479107 1018.98 981 SwaI ATTTAAAT 48434 103.01 9707 TaqI TCGA 994307 2114.72 472 TfiI GAWTC 1211505 2576.67 388 TseI GCWGC 2478298 5270.92 189 Tsp45I GTSAC 2013628 4282.65 233 TspMI CCCGGG 62792 133.55 7487 TspRI CASTG 3321214 7063.67 141 XbaI TCTAGA 121476 258.36 3870 XhoI CTCGAG 48886 103.97 9617 XmaI CCCGGG 62792 133.55 7487 ZraI GACGTC 142261 302.57 3305