# Callorhinchus milii genome, 974.482 Mbp of sequence in 21203 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 510748 524.12 1907 Acc65I GGTACC 147897 151.77 6588 AccI GTMKAC 593120 608.65 1642 AciI CCGC 4345142 4458.93 224 AclI AACGTT 269646 276.71 3613 AcuI CTGAAG 1476782 1515.45 659 AfeI AGCGCT 758091 777.94 1285 AflII CTTAAG 324866 333.37 2999 AflIII ACRYGT 1011254 1037.74 963 AgeI ACCGGT 80563 82.67 12095 AluI AGCT 7177490 7365.44 135 AlwI GGATC 2301158 2361.42 423 ApaI GGGCCC 104912 107.66 9288 ApaLI GTGCAC 381912 391.91 2551 ApeKI GCWGC 3960672 4064.39 246 ApoI RAATTY 3244748 3329.72 300 AscI GGCGCGCC 455 0.47 2141718 AseI ATTAAT 1065241 1093.14 914 AsiSI GCGATCGC 2061 2.11 472819 AvaI CYCGRG 749521 769.15 1300 AvaII GGWCC 1676179 1720.07 581 AvrII CCTAGG 121968 125.16 7989 BaeGI GKGCMC 956526 981.57 1018 BamHI GGATCC 243319 249.69 4004 BanI GGYRCC 693492 711.65 1405 BanII GRGCYC 941453 966.11 1035 BbvI GCAGC 3960672 4064.39 246 BccI CCATC 3785301 3884.42 257 BceAI ACGGC 877446 900.42 1110 BciVI GTATCC 504120 517.32 1933 BclI TGATCA 599300 614.99 1626 BcoDI GTCTC 3774892 3873.74 258 BfuAI ACCTGC 926705 950.97 1051 BfuCI GATC 4914040 5042.72 198 BglII AGATCT 426966 438.15 2282 BlpI GCTNAGC 371120 380.84 2625 BmrI ACTGGG 919364 943.44 1059 BmtI GCTAGC 101597 104.26 9591 BpmI CTGGAG 1284952 1318.60 758 BpuEI CTTGAG 902535 926.17 1079 BsaAI YACGTR 564791 579.58 1725 BsaHI GRCGYC 765679 785.73 1272 BsaI GGTCTC 706378 724.88 1379 BsaWI WCCGGW 404242 414.83 2410 BseRI GAGGAG 1777323 1823.86 548 BsgI GTGCAG 1207392 1239.01 807 BsiEI CGRYCG 280558 287.90 3473 BsiHKAI GWGCWC 1561739 1602.64 623 BsiWI CGTACG 36351 37.30 26807 BsmAI GTCTC 3774892 3873.74 258 BsmBI CGTCTC 787051 807.66 1238 BsmFI GGGAC 2696146 2766.75 361 BsmI GAATGC 900984 924.58 1081 BsoBI CYCGRG 749521 769.15 1300 Bsp1286I GDGCHC 2622572 2691.25 371 BspCNI CTCAG 4628742 4749.95 210 BspDI ATCGAT 168104 172.51 5796 BspEI TCCGGA 113712 116.69 8569 BspHI TCATGA 424392 435.51 2296 BspMI ACCTGC 926705 950.97 1051 BspQI GCTCTTC 224017 229.88 4350 BsrBI CCGCTC 403258 413.82 2416 BsrFI RCCGGY 404082 414.66 2411 BsrGI TGTACA 725174 744.16 1343 BsrI ACTGG 3781747 3880.78 257 BssHII GCGCGC 63633 65.30 15314 BssSI CACGAG 323871 332.35 3008 BstBI TTCGAA 196600 201.75 4956 BstEII GGTNACC 303420 311.37 3211 BstNI CCWGG 3705034 3802.06 263 BstUI CGCG 997591 1023.71 976 BstYI RGATCY 1447258 1485.16 673 BstZ17I GTATAC 187605 192.52 5194 Bsu36I CCTNAGG 356962 366.31 2729 BtgI CCRYGG 719590 738.43 1354 BtgZI GCGATG 335727 344.52 2902 BtsCI GGATG 3819330 3919.34 255 ClaI ATCGAT 168104 172.51 5796 CviAII CATG 6702285 6877.79 145 CviKI-1 RGCY 21575663 22140.65 45 CviQI GTAC 3867308 3968.58 251 DdeI CTNAG 6368646 6535.42 153 DpnII GATC 4914040 5042.72 198 DraI TTTAAA 1720193 1765.24 566 EaeI YGGCCR 800141 821.09 1217 EagI CGGCCG 63410 65.07 15367 EarI CTCTTC 1337510 1372.53 728 EciI GGCGGA 376975 386.85 2585 Eco53kI GAGCTC 350322 359.50 2781 EcoO109I RGGNCCY 908560 932.35 1072 EcoRI GAATTC 522881 536.57 1863 EcoRV GATATC 334104 342.85 2916 FatI CATG 6702285 6877.79 145 FauI CCCGC 1268033 1301.24 768 Fnu4HI GCNGC 4789484 4914.90 203 FokI GGATG 3819330 3919.34 255 FseI GGCCGGCC 2139 2.20 455578 FspI TGCGCA 372196 381.94 2618 HaeII RGCGCY 1543033 1583.44 631 HaeIII GGCC 3384844 3473.48 287 HgaI GACGC 813842 835.15 1197 HhaI GCGC 2895365 2971.18 336 HincII GTYRAC 1066374 1094.30 913 HindIII AAGCTT 538330 552.43 1810 HinfI GANTC 5440176 5582.63 179 HinP1I GCGC 2895365 2971.18 336 HpaI GTTAAC 343498 352.49 2836 HpaII CCGG 2008425 2061.02 485 HphI GGTGA 3953494 4057.02 246 Hpy188I TCNGA 6263268 6427.28 155 Hpy99I CGWCG 527881 541.70 1846 HpyAV CCTTC 4824103 4950.43 202 HpyCH4III ACNGT 7666786 7867.55 127 HpyCH4IV ACGT 3443594 3533.77 282 HpyCH4V TGCA 10935714 11222.08 89 KasI GGCGCC 72369 74.26 13465 KpnI GGTACC 147897 151.77 6588 MboI GATC 4914040 5042.72 198 MboII GAAGA 4666889 4789.10 208 MfeI CAATTG 934057 958.52 1043 MluCI AATT 14045536 14413.34 69 MluI ACGCGT 36046 36.99 27034 MlyI GAGTC 2362426 2424.29 412 MmeI TCCRAC 1244369 1276.95 783 MnlI CCTC 17690149 18153.39 55 MscI TGGCCA 470528 482.85 2071 MseI TTAA 11581725 11885.01 84 MspA1I CMGCKG 1076487 1104.68 905 MspI CCGG 2008425 2061.02 485 NaeI GCCGGC 97524 100.08 9992 NarI GGCGCC 72369 74.26 13465 NciI CCSGG 1255315 1288.19 776 NcoI CCATGG 395391 405.74 2464 NdeI CATATG 334707 343.47 2911 NgoMIV GCCGGC 97524 100.08 9992 NheI GCTAGC 101597 104.26 9591 NlaIII CATG 6702285 6877.79 145 NmeAIII GCCGAG 292606 300.27 3330 NotI GCGGCCGC 2827 2.90 344705 NruI TCGCGA 43385 44.52 22461 NsiI ATGCAT 590028 605.48 1651 NspI RCATGY 1590806 1632.46 612 PacI TTAATTAA 46341 47.55 21028 PaeR7I CTCGAG 158239 162.38 6158 PciI ACATGT 584756 600.07 1666 PleI GAGTC 2362426 2424.29 412 PluTI GGCGCC 72369 74.26 13465 PmeI GTTTAAAC 19257 19.76 50604 PmlI CACGTG 202018 207.31 4823 PpuMI RGGWCCY 586011 601.36 1662 PsiI TTATAA 900560 924.14 1082 PspGI CCWGG 3705034 3802.06 263 PspOMI GGGCCC 104912 107.66 9288 PspXI VCTCGAGB 47589 48.84 20477 PstI CTGCAG 880534 903.59 1106 PvuI CGATCG 67161 68.92 14509 PvuII CAGCTG 676487 694.20 1440 RsaI GTAC 3867308 3968.58 251 RsrII CGGWCCG 15343 15.74 63513 SacI GAGCTC 350322 359.50 2781 SacII CCGCGG 55491 56.94 17561 SalI GTCGAC 74041 75.98 13161 SapI GCTCTTC 224017 229.88 4350 Sau3AI GATC 4914040 5042.72 198 Sau96I GGNCC 2925535 3002.14 333 SbfI CCTGCAGG 14830 15.22 65710 ScaI AGTACT 359366 368.78 2711 ScrFI CCNGG 4960349 5090.24 196 SexAI ACCWGGT 192107 197.14 5072 SfaNI GCATC 2540608 2607.14 383 SfcI CTRYAG 2014756 2067.52 483 SfoI GGCGCC 72369 74.26 13465 SgrAI CRCCGGYG 6661 6.84 146296 SmaI CCCGGG 179231 183.92 5437 SmlI CTYRAG 1385640 1421.92 703 SnaBI TACGTA 102381 105.06 9518 SpeI ACTAGT 214497 220.11 4543 SphI GCATGC 206298 211.70 4723 SrfI GCCCGGGC 2698 2.77 361186 SspI AATATT 1367530 1403.34 712 StuI AGGCCT 257873 264.63 3778 StyD4I CCNGG 4960349 5090.24 196 StyI CCWWGG 1561227 1602.11 624 SwaI ATTTAAAT 61122 62.72 15943 TaqI TCGA 2679535 2749.70 363 TfiI GAWTC 3077750 3158.35 316 TseI GCWGC 3960672 4064.39 246 Tsp45I GTSAC 3421321 3510.91 284 TspMI CCCGGG 179231 183.92 5437 TspRI CASTG 6217315 6380.12 156 XbaI TCTAGA 318776 327.12 3056 XhoI CTCGAG 158239 162.38 6158 XmaI CCCGGG 179231 183.92 5437 ZraI GACGTC 510748 524.12 1907