# Boleophthalmus pectinirostris genome, 955.735 Mbp of sequence in 16619 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 186394 195.03 5127 Acc65I GGTACC 85208 89.15 11216 AccI GTMKAC 785533 821.92 1216 AciI CCGC 3544090 3708.23 269 AclI AACGTT 218649 228.78 4371 AcuI CTGAAG 1203782 1259.54 793 AfeI AGCGCT 210771 220.53 4534 AflII CTTAAG 280371 293.36 3408 AflIII ACRYGT 1640021 1715.98 582 AgeI ACCGGT 89528 93.67 10675 AluI AGCT 6540303 6843.22 146 AlwI GGATC 1663457 1740.50 574 ApaI GGGCCC 196658 205.77 4859 ApaLI GTGCAC 513541 537.33 1861 ApeKI GCWGC 3281132 3433.10 291 ApoI RAATTY 2800049 2929.73 341 AscI GGCGCGCC 1026 1.07 931515 AseI ATTAAT 889610 930.81 1074 AsiSI GCGATCGC 1104 1.16 865702 AvaI CYCGRG 542043 567.15 1763 AvaII GGWCC 2119857 2218.04 450 AvrII CCTAGG 64434 67.42 14832 BaeGI GKGCMC 1108511 1159.85 862 BamHI GGATCC 151627 158.65 6303 BanI GGYRCC 531864 556.50 1796 BanII GRGCYC 1004861 1051.40 951 BbvI GCAGC 3281132 3433.10 291 BccI CCATC 2603241 2723.81 367 BceAI ACGGC 891807 933.11 1071 BciVI GTATCC 348471 364.61 2742 BclI TGATCA 488274 510.89 1957 BcoDI GTCTC 3647932 3816.89 261 BfuAI ACCTGC 909468 951.59 1050 BfuCI GATC 4230412 4426.34 225 BglII AGATCT 597074 624.73 1600 BlpI GCTNAGC 202612 212.00 4717 BmrI ACTGGG 729186 762.96 1310 BmtI GCTAGC 95443 99.86 10013 BpmI CTGGAG 1388594 1452.91 688 BpuEI CTTGAG 759584 794.76 1258 BsaAI YACGTR 627352 656.41 1523 BsaHI GRCGYC 514348 538.17 1858 BsaI GGTCTC 694825 727.01 1375 BsaWI WCCGGW 477774 499.90 2000 BseRI GAGGAG 2274515 2379.86 420 BsgI GTGCAG 1249019 1306.87 765 BsiEI CGRYCG 269106 281.57 3551 BsiHKAI GWGCWC 1634750 1710.46 584 BsiWI CGTACG 62146 65.02 15378 BsmAI GTCTC 3647932 3816.89 261 BsmBI CGTCTC 509421 533.01 1876 BsmFI GGGAC 2299646 2406.15 415 BsmI GAATGC 550220 575.70 1737 BsoBI CYCGRG 542043 567.15 1763 Bsp1286I GDGCHC 2648064 2770.71 360 BspCNI CTCAG 3722870 3895.30 256 BspDI ATCGAT 222386 232.69 4297 BspEI TCCGGA 117016 122.44 8167 BspHI TCATGA 590703 618.06 1617 BspMI ACCTGC 909468 951.59 1050 BspQI GCTCTTC 225661 236.11 4235 BsrBI CCGCTC 409438 428.40 2334 BsrFI RCCGGY 325822 340.91 2933 BsrGI TGTACA 789364 825.92 1210 BsrI ACTGG 3337113 3491.67 286 BssHII GCGCGC 87872 91.94 10876 BssSI CACGAG 365606 382.54 2614 BstBI TTCGAA 94617 99.00 10101 BstEII GGTNACC 175737 183.88 5438 BstNI CCWGG 4895104 5121.82 195 BstUI CGCG 1025191 1072.67 932 BstYI RGATCY 1249073 1306.92 765 BstZ17I GTATAC 197610 206.76 4836 Bsu36I CCTNAGG 223729 234.09 4271 BtgI CCRYGG 811453 849.04 1177 BtgZI GCGATG 272092 284.69 3512 BtsCI GGATG 2358379 2467.61 405 ClaI ATCGAT 222386 232.69 4297 CviAII CATG 7924348 8291.36 120 CviKI-1 RGCY 18246325 19091.41 52 CviQI GTAC 4324092 4524.36 221 DdeI CTNAG 5337452 5584.66 179 DpnII GATC 4230412 4426.34 225 DraI TTTAAA 2562357 2681.03 372 EaeI YGGCCR 595802 623.40 1604 EagI CGGCCG 67298 70.41 14201 EarI CTCTTC 1404581 1469.63 680 EciI GGCGGA 230554 241.23 4145 Eco53kI GAGCTC 389859 407.92 2451 EcoO109I RGGNCCY 845258 884.41 1130 EcoRI GAATTC 298856 312.70 3197 EcoRV GATATC 280141 293.12 3411 FatI CATG 7924348 8291.36 120 FauI CCCGC 881175 921.99 1084 Fnu4HI GCNGC 4117706 4308.42 232 FokI GGATG 2358379 2467.61 405 FseI GGCCGGCC 1764 1.85 541799 FspI TGCGCA 168959 176.78 5656 HaeII RGCGCY 600764 628.59 1590 HaeIII GGCC 3193785 3341.71 299 HgaI GACGC 1074104 1123.85 889 HhaI GCGC 1922348 2011.38 497 HincII GTYRAC 960061 1004.53 995 HindIII AAGCTT 422891 442.48 2260 HinfI GANTC 4846684 5071.16 197 HinP1I GCGC 1922348 2011.38 497 HpaI GTTAAC 320982 335.85 2977 HpaII CCGG 1900545 1988.57 502 HphI GGTGA 2971895 3109.54 321 Hpy188I TCNGA 6608626 6914.71 144 Hpy99I CGWCG 539754 564.75 1770 HpyAV CCTTC 2642124 2764.49 361 HpyCH4III ACNGT 7487616 7834.41 127 HpyCH4IV ACGT 2930016 3065.72 326 HpyCH4V TGCA 9105316 9527.03 104 KasI GGCGCC 94406 98.78 10123 KpnI GGTACC 85208 89.15 11216 MboI GATC 4230412 4426.34 225 MboII GAAGA 4487266 4695.09 212 MfeI CAATTG 277943 290.82 3438 MluCI AATT 11227903 11747.92 85 MluI ACGCGT 61623 64.48 15509 MlyI GAGTC 2488475 2603.73 384 MmeI TCCRAC 942006 985.64 1014 MnlI CCTC 13048972 13653.34 73 MscI TGGCCA 307140 321.37 3111 MseI TTAA 13631477 14262.82 70 MspA1I CMGCKG 1070845 1120.44 892 MspI CCGG 1900545 1988.57 502 NaeI GCCGGC 60250 63.04 15862 NarI GGCGCC 94406 98.78 10123 NciI CCSGG 1099605 1150.53 869 NcoI CCATGG 446740 467.43 2139 NdeI CATATG 445604 466.24 2144 NgoMIV GCCGGC 60250 63.04 15862 NheI GCTAGC 95443 99.86 10013 NlaIII CATG 7924348 8291.36 120 NmeAIII GCCGAG 234886 245.76 4068 NotI GCGGCCGC 3037 3.18 314697 NruI TCGCGA 39376 41.20 24272 NsiI ATGCAT 627461 656.52 1523 NspI RCATGY 2279187 2384.75 419 PacI TTAATTAA 68008 71.16 14053 PaeR7I CTCGAG 133817 140.01 7142 PciI ACATGT 1031196 1078.96 926 PleI GAGTC 2488475 2603.73 384 PluTI GGCGCC 94406 98.78 10123 PmeI GTTTAAAC 38064 39.83 25108 PmlI CACGTG 221837 232.11 4308 PpuMI RGGWCCY 448527 469.30 2130 PsiI TTATAA 1095004 1145.72 872 PspGI CCWGG 4895104 5121.82 195 PspOMI GGGCCC 196658 205.77 4859 PspXI VCTCGAGB 36706 38.41 26037 PstI CTGCAG 790590 827.21 1208 PvuI CGATCG 71997 75.33 13274 PvuII CAGCTG 616163 644.70 1551 RsaI GTAC 4324092 4524.36 221 RsrII CGGWCCG 31968 33.45 29896 SacI GAGCTC 389859 407.92 2451 SacII CCGCGG 80397 84.12 11887 SalI GTCGAC 98019 102.56 9750 SapI GCTCTTC 225661 236.11 4235 Sau3AI GATC 4230412 4426.34 225 Sau96I GGNCC 3719154 3891.41 256 SbfI CCTGCAGG 15573 16.29 61371 ScaI AGTACT 475433 497.45 2010 ScrFI CCNGG 5994709 6272.35 159 SexAI ACCWGGT 682445 714.05 1400 SfaNI GCATC 2060794 2156.24 463 SfcI CTRYAG 2145104 2244.45 445 SfoI GGCGCC 94406 98.78 10123 SgrAI CRCCGGYG 10394 10.88 91950 SmaI CCCGGG 136716 143.05 6990 SmlI CTYRAG 1173772 1228.14 814 SnaBI TACGTA 127010 132.89 7524 SpeI ACTAGT 322975 337.93 2959 SphI GCATGC 230298 240.96 4149 SrfI GCCCGGGC 4155 4.35 230020 SspI AATATT 1542807 1614.26 619 StuI AGGCCT 314888 329.47 3035 StyD4I CCNGG 5994709 6272.35 159 StyI CCWWGG 961629 1006.17 993 SwaI ATTTAAAT 75820 79.33 12605 TaqI TCGA 2060580 2156.02 463 TfiI GAWTC 2358209 2467.43 405 TseI GCWGC 3281132 3433.10 291 Tsp45I GTSAC 3390708 3547.75 281 TspMI CCCGGG 136716 143.05 6990 TspRI CASTG 5479602 5733.39 174 XbaI TCTAGA 295887 309.59 3230 XhoI CTCGAG 133817 140.01 7142 XmaI CCCGGG 136716 143.05 6990 ZraI GACGTC 186394 195.03 5127