# Anguilla japonica genome, 1151.137 Mbp of sequence in 323740 scaffolds # # ENZYME SPECIFICITY SITES_COUNT SITES_PER_MEGABASE AVE_FRAG_LENGTH (bp) # AatII GACGTC 169811 147.52 6778 Acc65I GGTACC 183441 159.36 6275 AccI GTMKAC 859841 746.95 1338 AciI CCGC 7346483 6381.93 156 AclI AACGTT 325646 282.89 3534 AcuI CTGAAG 1637663 1422.65 702 AfeI AGCGCT 367060 318.87 3136 AflII CTTAAG 320539 278.45 3591 AflIII ACRYGT 1666352 1447.57 690 AgeI ACCGGT 143340 124.52 8030 AluI AGCT 8738492 7591.18 131 AlwI GGATC 1851147 1608.10 621 ApaI GGGCCC 326191 283.36 3529 ApaLI GTGCAC 614021 533.40 1874 ApeKI GCWGC 5002939 4346.08 230 ApoI RAATTY 3232096 2807.74 356 AscI GGCGCGCC 4450 3.87 258682 AseI ATTAAT 1144704 994.41 1005 AsiSI GCGATCGC 4370 3.80 263418 AvaI CYCGRG 713253 619.61 1613 AvaII GGWCC 2145078 1863.44 536 AvrII CCTAGG 126964 110.29 9066 BaeGI GKGCMC 1642632 1426.96 700 BamHI GGATCC 200746 174.39 5734 BanI GGYRCC 933638 811.06 1232 BanII GRGCYC 1470436 1277.38 782 BbvI GCAGC 5002939 4346.08 230 BccI CCATC 3446830 2994.28 333 BceAI ACGGC 1775278 1542.19 648 BciVI GTATCC 448765 389.84 2565 BclI TGATCA 534329 464.17 2154 BcoDI GTCTC 3306307 2872.21 348 BfuAI ACCTGC 1282640 1114.24 897 BfuCI GATC 4240643 3683.87 271 BglII AGATCT 424049 368.37 2714 BlpI GCTNAGC 471131 409.27 2443 BmrI ACTGGG 967485 840.46 1189 BmtI GCTAGC 391042 339.70 2943 BpmI CTGGAG 1486844 1291.63 774 BpuEI CTTGAG 751778 653.07 1531 BsaAI YACGTR 983578 854.44 1170 BsaHI GRCGYC 666956 579.39 1725 BsaI GGTCTC 658894 572.39 1747 BsaWI WCCGGW 614619 533.92 1872 BseRI GAGGAG 1666773 1447.94 690 BsgI GTGCAG 1665245 1446.61 691 BsiEI CGRYCG 486209 422.37 2367 BsiHKAI GWGCWC 2071108 1799.18 555 BsiWI CGTACG 110765 96.22 10392 BsmAI GTCTC 3306307 2872.21 348 BsmBI CGTCTC 509787 442.86 2258 BsmFI GGGAC 2556154 2220.55 450 BsmI GAATGC 1085998 943.41 1059 BsoBI CYCGRG 713253 619.61 1613 Bsp1286I GDGCHC 3787332 3290.08 303 BspCNI CTCAG 4992250 4336.80 230 BspDI ATCGAT 170421 148.05 6754 BspEI TCCGGA 154623 134.32 7444 BspHI TCATGA 553996 481.26 2077 BspMI ACCTGC 1282640 1114.24 897 BspQI GCTCTTC 283702 246.45 4057 BsrBI CCGCTC 595534 517.34 1932 BsrFI RCCGGY 736256 639.59 1563 BsrGI TGTACA 981640 852.76 1172 BsrI ACTGG 4206170 3653.93 273 BssHII GCGCGC 256491 222.82 4488 BssSI CACGAG 381084 331.05 3020 BstBI TTCGAA 149762 130.10 7686 BstEII GGTNACC 300466 261.02 3831 BstNI CCWGG 4246631 3689.07 271 BstUI CGCG 2519791 2188.96 456 BstYI RGATCY 1186758 1030.94 969 BstZ17I GTATAC 295982 257.12 3889 Bsu36I CCTNAGG 342242 297.31 3363 BtgI CCRYGG 1139754 990.11 1009 BtgZI GCGATG 473181 411.06 2432 BtsCI GGATG 3415345 2966.93 337 ClaI ATCGAT 170421 148.05 6754 CviAII CATG 9525861 8275.17 120 CviKI-1 RGCY 27708570 24070.60 41 CviQI GTAC 5422406 4710.48 212 DdeI CTNAG 6935111 6024.57 165 DpnII GATC 4240643 3683.87 271 DraI TTTAAA 2123199 1844.44 542 EaeI YGGCCR 1212434 1053.25 949 EagI CGGCCG 180872 157.12 6364 EarI CTCTTC 1317854 1144.83 873 EciI GGCGGA 471866 409.91 2439 Eco53kI GAGCTC 456632 396.68 2520 EcoO109I RGGNCCY 1324382 1150.50 869 EcoRI GAATTC 458926 398.67 2508 EcoRV GATATC 289625 251.60 3974 FatI CATG 9525861 8275.17 120 FauI CCCGC 2046500 1777.81 562 Fnu4HI GCNGC 6814421 5919.73 168 FokI GGATG 3415345 2966.93 337 FseI GGCCGGCC 10062 8.74 114404 FspI TGCGCA 347123 301.55 3316 HaeII RGCGCY 1010432 877.77 1139 HaeIII GGCC 5492074 4771.00 209 HgaI GACGC 1445271 1255.52 796 HhaI GCGC 3809276 3309.14 302 HincII GTYRAC 1061157 921.83 1084 HindIII AAGCTT 522123 453.57 2204 HinfI GANTC 5209764 4525.75 220 HinP1I GCGC 3809276 3309.14 302 HpaI GTTAAC 356831 309.98 3226 HpaII CCGG 2915809 2532.98 394 HphI GGTGA 3844804 3340.00 299 Hpy188I TCNGA 6985505 6068.35 164 Hpy99I CGWCG 810154 703.79 1420 HpyAV CCTTC 3819042 3317.62 301 HpyCH4III ACNGT 8380367 7280.08 137 HpyCH4IV ACGT 3639969 3162.06 316 HpyCH4V TGCA 13173512 11443.91 87 KasI GGCGCC 159312 138.40 7225 KpnI GGTACC 183441 159.36 6275 MboI GATC 4240643 3683.87 271 MboII GAAGA 4537800 3942.01 253 MfeI CAATTG 415642 361.07 2769 MluCI AATT 12729579 11058.26 90 MluI ACGCGT 147807 128.40 7788 MlyI GAGTC 2423659 2105.45 474 MmeI TCCRAC 1014569 881.36 1134 MnlI CCTC 15692262 13631.96 73 MscI TGGCCA 588161 510.94 1957 MseI TTAA 12987702 11282.49 88 MspA1I CMGCKG 2024446 1758.65 568 MspI CCGG 2915809 2532.98 394 NaeI GCCGGC 219665 190.82 5240 NarI GGCGCC 159312 138.40 7225 NciI CCSGG 1605020 1394.29 717 NcoI CCATGG 443890 385.61 2593 NdeI CATATG 570634 495.71 2017 NgoMIV GCCGGC 219665 190.82 5240 NheI GCTAGC 391042 339.70 2943 NlaIII CATG 9525861 8275.17 120 NmeAIII GCCGAG 419774 364.66 2742 NotI GCGGCCGC 9756 8.48 117992 NruI TCGCGA 68710 59.69 16753 NsiI ATGCAT 1043567 906.55 1103 NspI RCATGY 3189679 2770.89 360 PacI TTAATTAA 70159 60.95 16407 PaeR7I CTCGAG 127410 110.68 9034 PciI ACATGT 795619 691.16 1446 PleI GAGTC 2423659 2105.45 474 PluTI GGCGCC 159312 138.40 7225 PmeI GTTTAAAC 24039 20.88 47886 PmlI CACGTG 367200 318.99 3134 PpuMI RGGWCCY 614340 533.68 1873 PsiI TTATAA 821256 713.43 1401 PspGI CCWGG 4246631 3689.07 271 PspOMI GGGCCC 326191 283.36 3529 PspXI VCTCGAGB 37474 32.55 30718 PstI CTGCAG 1296558 1126.33 887 PvuI CGATCG 83115 72.20 13849 PvuII CAGCTG 1123340 975.85 1024 RsaI GTAC 5422406 4710.48 212 RsrII CGGWCCG 64320 55.88 17897 SacI GAGCTC 456632 396.68 2520 SacII CCGCGG 215130 186.88 5350 SalI GTCGAC 90535 78.65 12714 SapI GCTCTTC 283702 246.45 4057 Sau3AI GATC 4240643 3683.87 271 Sau96I GGNCC 4740174 4117.82 242 SbfI CCTGCAGG 42361 36.80 27174 ScaI AGTACT 417582 362.76 2756 ScrFI CCNGG 5851651 5083.36 196 SexAI ACCWGGT 225592 195.97 5102 SfaNI GCATC 3023210 2626.28 380 SfcI CTRYAG 2835802 2463.48 405 SfoI GGCGCC 159312 138.40 7225 SgrAI CRCCGGYG 29218 25.38 39398 SmaI CCCGGG 230054 199.85 5003 SmlI CTYRAG 1199727 1042.21 959 SnaBI TACGTA 166798 144.90 6901 SpeI ACTAGT 227780 197.87 5053 SphI GCATGC 692168 601.29 1663 SrfI GCCCGGGC 8994 7.81 127989 SspI AATATT 1372170 1192.01 838 StuI AGGCCT 532700 462.76 2160 StyD4I CCNGG 5851651 5083.36 196 StyI CCWWGG 1279668 1111.66 899 SwaI ATTTAAAT 85154 73.97 13518 TaqI TCGA 2064412 1793.37 557 TfiI GAWTC 2786105 2420.31 413 TseI GCWGC 5002939 4346.08 230 Tsp45I GTSAC 3710567 3223.39 310 TspMI CCCGGG 230054 199.85 5003 TspRI CASTG 7124340 6188.96 161 XbaI TCTAGA 282411 245.33 4076 XhoI CTCGAG 127410 110.68 9034 XmaI CCCGGG 230054 199.85 5003 ZraI GACGTC 169811 147.52 6778