InBase, Splicing Motifs

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U>Block ABlock BBlock FBlock G SVTGDTPIITRHQ 13 TGCIDVTEDHSLLD 99 YVYDLET**ESGSFHA 342 GEMIVKNT 352 CLAKGTRLLRYDG 13 IEDLVVTPNHILVL 69 TTEWAGFRVDKDQLYL 156 DYLVLHNS 166 CLAKGTQLLRYDG 13 KEDLVVTPNHILVL 69 MTEWAGFRVDKDQLYL 526 DFLVLHNS 536 CLAKGTRLLRYDG 13 KEDLVVTPNHILVL 69 ATEWAGFRVDKDQLYL 810 DYLVLHNS 820 CLAKGTRLLRYDG 13 KEDLVVTPNHILVL 69 ATEWAGFRVDKDQLYL 810 DYLVLHNS 820 CLANGTQLLRYDG 13 KEDLVVTANHILVL 69 ATEWAGFRVDKDQLYL 596 DYVVLHNS 605 CLAKGTRLLRYDG 13 IEDLVVTPNHILVL 69 TTEWAGFRVDKDQLYL 160 DYLVLHNS 170 CLAWDTKLLRYDG 13 KEDLVVTGNHILVL 69 ATNWAGFRVDKDQLYL 829 DYLVLHNS 839 CLSGDTEVVLGNG 13 GRVIKADPEHPLFA 75 RLYDFNTV*SQNHSFF 480 NSIVSHNC 489 PRP8-1 CFAPGTLVRMANG 13 ASGFTCNSRHDLII 85 FGFELEPLQSSAPHFL 456 SFVVVHNC 466 PRP8-2 CFAGHTSLLLADG 13 GDELVVTGNHILCL 68 QPYYGFKV*DGNQRFL 456 DFMVLHNS 466 CLSGDTEVVLGNG 13 GRVIKADPEHPLFA 75 RLYDFNTV*SQNHSFF 480 NSIVSHNC 489 eIF-5B CFGRDTPLLMADG 13 HDAFVCNKEHILVM 73 GEYFGFTVMGPNSRFL 410 DFTVTHNT 420 CVAPETMILTEDG 13 GCTLSCTPEHKFII 68 RVDDTYC**FTEPINH 329 NGILTGQC 340 ORF212392 CLHPETDVITFSG 13 GEPWKCNETHVLSL 68 VGDYVGPVLDKDHRYL 382 DFTVTHNT 392 CVAGDTKILTSSG 13 GTELRCTPYHKFYI 68 DTYCFN**EPKRHMGV 328 GVITGGQC 337 CVVGETLVLTQNG 13 GTSIICTPYHNFLS 68 DTYCFS**EPLNNAGV 131 NGILTGQC 140 CLQNGTRLLRADG 13 LEDLVCTHNHILSL 68 PTKWSGFVVDKDSLYL 161 DYLVLHNS 171 CLQNGTRLLRADG 13 LEDLVCTHNHILSL 68 PTKWSGFVVDKDSLYL 161 DYLVLHNS 171 CLTSDHTVLTTRG 13 GVDLFVTPNHRMYV 73 PVYCLTG***PNNVFY 445 KAVWTGNS 457 CLQNGTRLLRADG 13 LEDLVCTHNHILSL 68 PTKWSGFVVDKDSLYL 161 DYLVLHNS 171 CFAKGTQVLMADG 13 DLSYTCNSNHTLVL 70 YGVTLD**DDSDHQFL 406 NLVLVHNC 416 CHAEGTELIKFDR 13 VESLVVTDNHIMML 72 STPWYGFAVDSDRQYL 513 DWMVLHNS 523 PRP8 (Fne-A PRP8) CLQNGTRLLRADG 13 LEDLVCTHNHILSM 69 PTKWSGFVVDKDSLYL 162 DYLVLHNS 172 PRP8 (Fne-AD PRP8) CLQNGTRLLRADG 13 LEDLVCTHNHILSM 69 PTKWSGRVVDKDSLYL 163 DYLVLHNS 173 CLQNGTRLLRADG 13 LEDLVCTHNHILSM 69 PTKWSGRVVDKDSLYL 163 DYLVLHNS 173 CLSEDMRIQTDKG 13 GVSLLVTEDHDMYV 86 RVWCVTV**PTGLIVA 160 KPVVIGNC 183 CLSEEHQVLTNEG 13 GLSLVVTPGHDMYL 92 RTWCVS****LPHTYI 408 LPTILGNC 432 CLTPSHEVLTENG 13 EIELQVTQEHYMWV 83 SVHCVEV**PEPHLFY 350 KGVWTGNS 363 CLSEDMRVQTNKG 13 SFSLFVTDNHDMYV 85 RVWCVTV**PTGLIIV 323 RPTIVGNC 346 CFTKGTQVMMADG 13 LMDFTVSADHKLIL 78 YGITLA**EETDHQFL 462 NMALVHNC 472 CLHPDTIITMSNG 13 GKEIICTNDHRFLT 78 EISDFTT*ESDYHSMI 456 NGFVSHNC 465 CLASDTLVRTSEG 13 RVSFKCTPDHHLEL 73 EDGEFRAIEVSGGVFQ 599 NRLVVANC 608 CFAKGTEVLMADG 13 RIAFTCNAKHELVV 76 YGVTLP**DNSDHQFM 386 NQAVVHNC 395 CLANGTQLLRYDG 13 KEDLVVTANHILVL 69 ATEWAGFRVDKDQLYL 596 DYVVLHNS 606 CLANGTQLLRYDG 13 KEDLVVTANHILVL 69 ATEWAGFRVDKDQLYL 596 DYVVLHNS 606 CLSYATNQPYFLK 13 ISVIVSTVEHYVLT 86 NVYDFWI*PKTNNFFV 153 NALLVHNS 161 SVTKETPLMLRTM 13 NGYVEVTEDHSLIS 98 YVYDVET**EDGIFHA 223 GEIIVKNT 233 CLAKGTQLLRYDG 13 KEDLVVTPNHILVL 69 MTEWAGFRVDKDQLYL 525 DFLVLHNS 535 CVAPETMILTEDG 13 GCTLSCTPEHKFII 68 RVDDTYC**FTEPINH 329 NGILTGQC 340 CFAKGTQVMMADG 13 LMNYVCSGNHKIVM 76 YGITVP**DNTDKQYL 493 SMALVHNC 503 CFSKGTEVMMGDG 13 KISFQCNSSHKLVL 74 FGVTLA**EESDHKFL 401 NMTLVHNC 411 CFSKGTEVMMGDG 13 KISFQCNSSHKLVL 74 FGVTLA**EESDHKFL 401 NMTLVHNC 411 VMA CFSKGTEVMMGDG 13 KISFQCNSSHKLVL 74 FGVTLA**EESDHKFL 401 NMTLVHNC 411 CFTKGTQVMMADG 13 SLNFTVSADHKLVL 71 YGITLS**ETSDHMFL 412 NLALVHNC 422 CLAKGTRLLRYDG 13 VEDLVVTPNHILVF 69 TTEWAGFRVDKDQLYL 155 DYLVLHNS 165 CLAKGTRLLRYDG 13 KEDLVVTPNHILVL 69 TTEWAGFRVDKDQLYL 508 DYLVLHNS 518 CLAKGTRLLRYDG 13 VEDLVVTPNHILVL 69 TTEWAGFRVDKDQLYL 146 DYLVLHNS 156 CLAKGTRLLRYDG 13 IEDLVVTPNHILVL 69 STEWAGFRVDKDQLYL 160 DYLVLHNS 170 CLAKGTRLLRYDG 13 IEDLVVTPNHILVL 69 TTEWAGFRVDKDQLYL 160 DHLVLHNS 170 CLAKGTRLLRYDG 13 IEDLVVTPNHILVL 69 STEWAGFRVDKDQLYL 160 DYLVLHNS 170 CLSPDTMVRTTNG 13 KSSFTCTPDHIMTL 73 GEFRLI**EVSGELFQ 640 DRTVVHNC 650 CLHPSTTVRTLAG 13 KKSFKCTPDHILPL 73 DDYRAI**QVSGSLFQ 673 NGLVTHNC 683 CFSGDTFLLLADG 13 GEALEVTGNHILCL 68 PQTYYGFRIDGNQRFL 189 DGLVVHNS 199 CFAGDTFLLLADG 13 GEALEVTGNHILCL 68 PQTYYGFRIDGNQRFL 189 DGLVVHNS 199 CLAKGTLLLRYDG 13 KEDLVVTPNHILVL 69 ATEWAGFRVDQDQLYL 564 DFLVLHNS 574 CLAKGTRLLRCDG 13 KEDLVVTPNHILVF 69 KTEWAGFRVDKDQLYL 148 DYLVLHNS 158 CLAKGTRLLRYDG 13 KEDLVVTPNHILVL 69 ETEWAGFRVDKDQLYL 153 DYLVLHNS 163 CLASDTLVRTTQG 13 LVSFKCTPDHHLEL 73 GEFRAI**EVSGGKFQ 544 NGLQIANC 554 CLASDTLVRTTQG 13 LVSFKCTPDHHLEL 73 GEFRAI**EVSGGKFQ 544 NGLQIANC 554 CLETATVVRTKQG 13 VDSFTCTPDHELLL 73 GSYRGI**EVSGHEFQ 626 NRTMVSNC 636 CLSADHEVLTSTG 13 DMDAVCNESHRWYL 73 EYSDNDKIQEVIDAAQ 449 KPFFTGNC 457 CISKFSHIMWSHV 13 EKYLELTSNHKILT 74 NVFDFAA**NPIPNFI 142 NNIIVHNS 151 CFAKGTKVLMANG 13 TASYTCNATHKLVL 77 YGITLS**EDSDHQFL 440 NLALVHNC 450 CLQNGTKLLRYDA 13 KEDLVVTSNHILVL 69 PTGWSGFKVDQDQLYL 835 DYIVLHNS 845 CLAKGTRLLRYDG 13 KEDLVVTPNHILVL 69 KTEWAGFRVDKDQLYL 152 DYLVLHNS 162 CISKFNYLQTSLY 13 GKYIQLTSNHKLLT 76 IVFDLEC**KPLCNFI 140 NNFIVHNS 149 CLTPDHEVLTERG 13 HVSLITTPNHRMWT 72 KVHCIEV***PGHVFY 342 KAVWTGNS 355 CFAKGTEVLMADG 13 LMNYVCSGNHKLVL 78 YGITLP**DETDKQYL 508 SLALVHNC 518 CFAKGTEVLMADG 13 LMNYVCSGNHKLVL 78 YGITLP**DETDKQYL 508 SLALVHNC 518 CFAKGTTVLMADG 13 LLKFTCNSTHELVV 83 YGITLS**DDSDHQFL 445 NQVVVHNC 455 CFAKGTNVLMADG 13 LLKFTCNATHELVV 83 YGITLS**DDSDHQFL 445 NQVVVHNC 455 CFAKGTNVLMADG 13 LLKFTCNATHELVV 83 YGITLS**DDSDHQFL 445 NQVVVHNC 455 CFAKGTNVLMADG 13 LLKFTCNATHELVV 83 YGITLS**DDSDHQFL 445 NQVVVHNC 455 CFAKGTNVLMADG 13 LLKFTCNATHELVV 83 YGITLS**DDSDHQFL 445 NQVVVHNC 455 CFAKGTQVMMADG 13 VMDYVCSGNHKLVL 79 YGITLP**DSTDKQYL 492 SLALVHNC 502 CFAKGTQVMMADG 13 LMNYVCSGNHKIVM 76 YGITVP**DNTDKQYL 490 SMALVHNC 500 RPB2 (RpoB) CLTVDHEVLTTKG 13 NLDLLVTLNHRMYV 83 AVYCLSV***PNEIFY 378 LSVWTGNS 391 CFAKGTEVLMANG 13 NLSYTCNATHKLVL 77 YGVTLA**EDSDHQFL 467 NLTLVHNC 477 CFAKGTNVLMADG 13 LLKFTCNATHELVV 83 YGITLS**DDSDHQFL 445 NQVVVHNC 455 CLAAGTKVMVVRN 13 SQEYTVTEGHLLSL 76 TYFRFSV**DGYQSRF 463 DWTVVHNC 474 CFEKGTEVLMADG 13 LMDYVCSGNHKFVL 75 YGVTLP**DATDKQYL 405 SLALVHNC 415 CFAKGTPVMMHDG 13 LFEYTCNATHKLVV 84 YGITLS**ENSDHQFM 447 NQLVVHNC 457 CFAKGTKVLLHDG 13 LFEYTCNATHKLVV 84 YGLTLA**NGTDHQFM 446 NQLVVHNC 456 CLAKGTRLLRYDR 13 VEDLVVTPNHILVF 69 ETEWAGFRVDQDQLYL 171 DYLVLHNS 181 CFAKGTEVMMADS 13 LFSFVCNATHQLIV 74 YGITLP**EYSDHQFM 434 NQVVVHNC 434 CVVGETLILTENG 13 GIFIVCTEYHRFLV 68 NTYCFT**EQLNNAGV 130 NGILTSNC 139 CFAKGTEVMMHDG 13 LFEYNCNATHKLVV 84 YGITLA**KESDHQFL 447 NQLVVHNC 457 CFAKGTEVMMSDA 13 LSEYTCNATHKLVV 81 YGLTLS**NDSDHQFL 441 NQLVVHNC 451 CFAKGTEVMMSDG 13 LFEYTCNATHKLVV 83 YGLTLS**NESDHQFL 441 NQLVVHNC 451 aBlock ABlock BBlock FBlock G CLAKGTLVLTITG 13 AYGVGMTADHQVLT 62 EVYDLIN*CGPRNRFV 294 GPLIVHNC 307 CFIEGTEVLTKRG 13 NWEVVATEGHEFIV 75 KVYCVSV**PKGNIVV 335 SVCIAGNC 347 CVDDTTEALTQRG 13 TLDMLMTPDHRVVH 73 RVWCPIV*PGTSTWVA 322 MPFITHNT 334 CVTADTWVMTDAG 13 GHALRLTEDHLVRR 70 DVYDVTVA**DCHAFD 380 NGLCVHNC 389 CQPYSAPVSTPDG 13 GHVLDVTPDHLVWQ 71 PVYDIQT***ESGEYL 145 DGIRVHNC 154 CIMAGSRLVDPRT 13 GREIATTLTHPFLT 76 QVYDLTV**DGTHNFV 493 EDVCVHNT 502 CVTGDTRVLLADG 13 GRTIRCTPEHRLRG 74 EVFDLTV**PGNACWL 410 DGIVSHNS 419 CVTADTWVQTADG 13 GYRLKLTADHRVRR 70 EVYDVQV**PGINTFD 369 NGLHAHNC 378 NVYDVCV**ETDHNFV C27 NGLVASNC C37 CLSYDTEIWTVEY N13 GRKIRATKDHKMMT N76 NVYDIGV**EHHHNFA C27 NGLIASNC C37 CLSADTEILTVEY N13 GSIIRATKDHKFMT N76 GLALDTPIPAPKG 13 GTSLVASDGNLWQA 69 IRVDT*****KDSLFQ 322 GCQLTHNT 333 NVYDIGV**RRDHNFF C27 NGLIASNC C37 CLSYDTEVLTVEY N13 GSIIKATKDHKFMT N76 NVYDIGV**GRDHNFF C27 NGLIASNC C37 CLSYDTEVLTVEY N13 GSIIKATKDHKFMT N76 CFAPETLVHTADG 13 VEPIEVTAGHPFYA 70 FVFDLKV**EGDESYM 370 TSGLAHNG 379 AQPLDARVRTLTG 13 GRSAECCDEHLWCV 68 ATQCISV*SHPSRLYV 339 DYVVTHNT 348 CVTGETLLLTENG 13 GYEIRATEWHKFYV 83 DVYDTTQ**EDYHSLI 377 NGIVTGNC 386 CVTGETLLLTENG 13 GYEIRATEWHKFYV 83 DVYDTTQ**EDYHSLI 377 NGIVTGNC 386 CVTADTLIATDRG 13 GYQLKLTGDHVVFT 69 AVFDLTE*PETDHFIA 363 NGIGVHNC 371 CLHGDSLIVTDHG 13 GFTLTGSHNHRIML 70 DVYDISV**TATHRYA 268 QGFINHNS 277 CFDGQQKTLTKSS 13 NKEILVTEDHINVT 81 YVYCFEMKNIEEPYFT 321 NGIITHNC 331 CFDGQQKTLTKSS 13 NKELLVTEDHINVT 81 YVYCFEMKNIEEPYFT 321 NGVITHNC 331 CVTGDTLICLADG 13 GRSIKATAEHRLLA 71 EVYDLTV**PKYASWL 138 DGVVSHNS 147 CVTADTLIATDRG 13 GYQLKLTGDHVVFT 69 AVFDLTE*PETDHFIA 363 NGIGVHNC 371 CVTGDTLVFTDKG 13 GLEIKVTEEHKIFT 67 EVFDITA**PPKYTWI 337 NGILSLDC 346 ALDLDTPIDTPTG 13 GEFIIADTEHIWTV 69 PVKCIAV*EDEKKLYL 392 NHTATHNT 403 CFVAGTMILTVAG 13 GDVIKTTFEHLFYA 72 KVYNFQV**DDFHTYH 125 NGVLVHNV 136 QLALDTPIPTPDG 13 GTSIVAGERHLWKV 69 KMRCIQV*DSPSRLYL 323 SMIPTHNS 334 CLATNSEIILADG 13 GRYIETTLTHPYLT 75 QVYDLTI**PKTHNFV 488 NDICVHNT 497 KVYDIGV**EKDHNFL C27 NGSIASNC C37 CLSYDTEILTVEY N13 GSKIKATKDHKFMT N76 CFDGKTKILTNQG 13 DNTLRLTPDHKMVN 81 DVYNITV**AEHHNYV 381 TPVVVCNC 395 CVAPETKILTDRG 13 GESLDCTYYHKFHV 68 CRYDDTYCFSEPKRHL 337 NGILTGQC 348 CVTADTLIDVPGT 13 GRVVETTPHHPFLG 76 QVYDLTV**PGDANFI 394 ADICLHNT 402 CVTGDTWVLTEEG 13 GYELKVTADHLVRV 80 EVFDAQV**PGINAFD 358 NGIYVHNC 367 CVTGDTWVLTEEG 13 GYELKVTADHLVRV 80 EVFDAQV**PGINAFD 358 NGIYVHNC 367 CVTADTWVSTAFG 13 GYELRLTGNHQLLK 69 AVYDVTV**EQVHAFD 308 NGVLAHNC 367 PAQCIAV*DAPDHLYV C148 GYIVTHNT C158 AQPLDAKVLTPLG 13 GASVEADAEHLWNV N68 Snf2AQPLDAKVLTPLG 13 GASVEADAEHLWNV 68 PAQCIAV*DAPDHLYV 334 GYIVTHNT 344 CQPAGTMVQKVID 13 GRVTRATPEHRFTV 86 YSMDVD***KDLHYVA 281 DGLVTHNC 289 ALALGTALPTPTG 13 GSVIVADGQHQWIT 69 PVRCVEVD*SPDHLYL 398 TCIPTHNS 409 CQPYDALVSTPSG 13 GHALDVTADHLVWR 71 PVYDIQT***DSGEYL 286 AGLRVHNC 295 CVVAGTEVTDAET 13 GKSITATDNHPFRV 77 DTYDLTV**DEDHNFV 438 NGLIVHNS 447 CQPAGTQVAKVIK 13 AVTGITSRRHTGNL 64 EVWSMDV*ERDKHYVA 280 DGIVVHNC 288 CCAADTPIADPVT 13 GREVKTTLTHPYLT 80 QVYDLTV**PVTHNFV 250 ADICLHNT 259 CFAAGTLLHTEQG 13 GYSVEVTANHKMAR 69 RVYDIEV**EGMHLLS 405 NGIYTSNS 414 CVTADTWVHTGDG 13 GHQLRLTGNHQVLK 70 EVYDCTV**PGPARFD 359 NGLVVHNC 368 CLAYDAEIVQADG 13 GRRIETTLTHPFLT 75 QVYDLTI**PETHNFI 484 NDVCVHNT 493 CVTGDTLVLLADG 13 GRLLRATARHRLLT 74 DVYDLTV**PGPASWV 137 DSIISHNS 146 CLTAGTRVLRADT 13 GKTVRATANHPFLT 78 QVYDATV**LGGHNFV 420 DGIAVHNS 429 Helicase CHAYGHDIMMSDG 13 YIRSSSTFKHRSKL 102 GVGDYYGF/DGDHLYL 330 DFVRHHNC 340 CFPGQSELKGLPR 13 GTVLLATPNHPILT 47 QASCHIYNLQTVSGYY 316 NSVFVSNC 326 PLALNTEVPTPSG 13 GTEITASASHGWTT 69 PVKCIGI*DTEDHLFQ 331 SRILTHNT 342 CSWTNARAVTRRG 13 EINATITANHRVVG 72 EVWCLRV**PNGRFFI 306 KIHLTGNS 318 SLACSTPILTTNG 13 GQEVVTDAEHLWQV 69 PVRCITV*AHESSLYV 321 GFVPTHNT 332 ALDVETPILTGNG 13 GAELVASDHHLWAV 68 ETVCIQI*DHPSHVFL 320 SLTPTHNT 332 ALAIDTPILSERG 13 GQTIVADEDHLWTV 68 PTRCITV*DNDSRLYV 330 GFVPTHNT 341 CSWTNARAVTRRG 13 EINATITANHRVVG 72 EVWCLRV**PNGRFFI 306 KIHLTGNS 318 ALALDTPLPTPTG 13 GTVIVADAAHQWLT 70 AVRCVEV*DNDSHMYL 327 AMVPTHNS 338 ALALDTPLPTPTG 13 GTVIVADAAHQWLT 70 AVRCVEV*DNDSHMYL 327 AMVPTHNS 338 ALALDTPLPTPTG 13 GTVIVADAAHQWLT 69 AVRCVEV*DNDSHMYL 407 AMVPTHNS 418 CLPAGELITTADG 13 ANAFSVTAEHPLLA 71 PVYNLDV**ENPDSYL 351 YGFAVHNC 360 CLAEGTRIFDPVT 13 GAIVWATPDHKVLT 77 RTFDLEV**EELHTLV 432 EGVVVHNC 441 SufB (Mbo Pps1) CLPAGELITTADG 13 ANAFSVTAEHPLLA 71 PVYNLDV**ENPDSYL 351 YGFAVHNC 360 CLTASTRILRADT 13 GREVEATGSHPFMK 77 HVFDGTV**SGTHNFV 408 NGISLHNS 417 CLTASTRILRADT 13 GREVEATGSHPFMK 77 HVFDGTV**SGTHNFV 408 NGISLHNS 417 CFPAETPVRAAAR 13 GHRLTLTANHPVLT 45 HVYDFET**ETGLIMA 307 GGVIVHNC 315 CVTADTWVMTASG 13 GHTLRLTANHPVLR 70 AVYDVTV**ADVHAFD 372 NGLYVHNC 381 CFNYSTRVQLADG 13 RSQFAATPNHLIRT 83 NRFDIEV**EGNHNYF 356 DGVMVHNS 365 CFAAGTLIKTPKG 13 GTSIVCTHDHPFFC 66 AVYNLRV**SGHPSYF 262 GGVLVHNC 271 ALPLDALVHTPAG 13 GRTAEACPEHLWEV 68 QAACIRI*DHPDHLFI 356 DYVVTHNT 366 CFSYGTRVQLADG 13 RSQFAATPNHLIRT 83 NRFDIEV**EGNHNYF 355 DGVMVHNS 364 CVTGDALVRLPFG 13 GYEVTGTANHPLLC 79 PVYSLRV*DTDDHSFL 412 NGFVSHNT 422 CFAYGTRGALADG 13 KSQFAATPNHLIRT 83 NRFDIEV**EGNHNYF 356 DGVMVHNS 365 RecA CFNYSTRVQLADR 13 KSQFAATPNHLIRT 83 NRFDIEV**EGNHNYF 356 DGVMVHNS 365 ALALDTPLPTPTG 13 GTVLVADAEHQWLT 69 PVRCVEV*DNDDHLYL 407 SMIPTHNS 418 CTTGDTLVRLPFG 13 GYEVTGTANHPLLC 79 PVYSLRV*DTDDHAFL 398 NGFVSHNT 421 CGSWYTNVTLADG 13 HASLAMTRNHLIRT 86 SRFDIEV**EGSHNYF 360 DGVMVHNS 369 SufB (Mga Pps1) CLAGDTLWTANRG 13 RRSVRATDNHPMLV 73 PVYDIEV**DGPHNFV 357 EGLVVNHS 379 ALALDTPLPTPTG 13 GTVLVADAEHQWLT 69 PVRCVEV*DNDDHLYL 407 SMIPTHNS 418 CVTGDAMVRLPFG 13 GYEVTGTSNHPLLC 79 PVYSLRV*DTDDHSFI 412 NGFVSHNT 422 CLTGDALVRLPFG 13 GYEVTGTSNHPVLC 79 PVYSLRV*DSEDHAFL 412 NGFVSHNT 421 ALALDTPLPTPTG 13 GTVIVADAAHQWLT 69 AVRCVEV*DNGSHLYL 325 AMVPTHNS 336 CVTGDALVRLPFG 13 GYEVTGTANHPLLC 79 PVYSLRV*DTDDHAFL 412 NGFVSHNT 421 ALALDTPLPTPTG 13 GTVIVADAQHQWPT 69 PVRCVEV*DNAAHLYL 135 GMVPTHNS 146 CVSGNSLVRLLFG 13 GYEITGTSNHPLLC 79 PVFSLHV*DTEDHSFL 412 NGFISHNT 421 CMNYSTRVTLADG 13 KSQFAATPNHLIRT 83 NRFDIEV**EGNHNYF 357 DGVMVHNS 366 SufB (Mle Pps1) CLTADARINVKGK 13 GRALEATGNHQFLV 72 PTYDIQV**VGLENFV 378 NGIVAHNS 387 CCTGDALVRLPFG 13 GYEVTGTSNHPLLC 79 PVYSLRV*DTDEHAFL 412 NGFVSHNT 421 Magn8951 BIL CFVAGTPVRMADG 13 SLDFFVTADHPFLT 68 VVYNLHL**IGNNTYV 133 SGYYVHNY 142 CMNYSTRVTLADG 13 KSQFAATPNHLIRT 83 NRFDIEV**EGNHNYF 356 DGVMVHNS 365 ALALDTPLPTPSG 13 GTAIVADAQHQWPT 69 PVRCVEV*DNPEHLYL 129 GMVPTHNS 140 CMTANTRILRADT 13 GREVEATANHPFLT 68 DVYDGTV**PGTHNFV 417 QGISAHNS 426 ALALDTPLPTPDG 13 GTVIVADAQHQWLT 69 PVRCVEV*SNDSHMYL 312 SMVPTHNS 323 CVTGDALVRLPLG 13 GYTVTGTENHPLLC 79 PVYSLRV*DTEDHAFI 413 NGFVSHNT 422 ALALDTPLPTPDG 13 GTVIVADAQHQWLT 69 PVRCVEV*SNDSHMYL 312 SMVPTHNS 323 CVTGDALVRLPLG 13 GYTVTGTENHPLLC 79 PVYSLRV*DTEDHAFI 413 NGFVSHNT 422 CFDYSTRAQLADG 13 RARFAATPNHLIRT 83 NRYDIEV**EGNHNYF 357 DGVMVHNS 366 SufB (Mtu Pps1) CLPAGELITTADG 13 ANAFSVTAEHPLLA 71 PVYNLDV**ENPDSYL 351 YGFAVHNC 360 CLTASTRILRADT 13 GREVEATGSHPFMK 77 HVFDGTV**SGTHNFV 408 NGISLHNS 417 CLTASTRILRADT 13 GREVEATGSHPFMK 77 HVFDGTV**SGTHNFV 408 NGISLHNS 417 CLTASTRILRADT 13 GREVEATGSHPFMK 77 HVFDGTV**SGTHNFV 408 NGISLHNS 417 CLTASTRILRADT 13 GREVEATGSHPFMK 77 HVFDGTV**SGTHNFV 408 NGISLHNS 417 CLAEGTRIFDPVT 13 GAIVWATPDHKVLT 77 RTFDLEV**EELHTLV 432 EGVVVHNC 441 CLAEGTRIFDPVT 13 GAIVWATPDHKVLT 77 RTFDLEV**EELHTLV 432 EGVVVHNC 441 ALALDTPLPTPTG 13 GTVIVADAEHQWLT 69 PVRCVEV*DNDDHMYL 406 SMIPTHNS 417 CLTGDSMVRLPFG 13 GYEVTGTANHPLLC 79 PVYSLRV*DTDDHSFI 413 NGFVSHNT 422 CVKNDSLIFTDRG 13 GYELEATPEHPIRV 77 DVVDLSV**PETHEFV 428 NGVVCHNT 437 CITGDALVALPEG 13 GLRVTGTANHPLLC 79 PVYSLRV*DTADHAFI 190 NGFVSHNT 199 CLPASTRILRADT 13 GREVEATGNHPFLT 77 DVYDGTV**PGTHNFV 417 QSISVHNS 426 CFPAGTVVSGPSA 13 GKQLSLTGNHPVLT 46 HVFSLTSS**EGWHTA 308 NSLIVSNC 314 CFPAGTPVDTIDG 13 KEPIRCTPEHPILV 70 QVYNLHV**EGTHTYT 388 RGAVVHNC 410 CLAGDSLVTLVDS 13 GRKIRATGNHKFLT 77 EVFDLTV**PGLHNFV 421 NNIIVHNS 430 NVYDIGV**ERDHNFA C27 NGFIASNC C37 CLSYETEILTVEY N13 GSVIRATSDHRFLT N76 CFIGDTLIPLADG 13 GEEIICTPDHQFML 76 DVYCLTV**PEYHNFA 313 AGVFVHNC 323 ALALDTALPTPSG 13 GSRIVADAQHQWLT 69 PVRCVEV*DNTEHLYL 342 SMIPTHNS 353 CLAGETKVLTWDG 13 RKELFATDGHRWFV 71 EVYCAEV**EDGHAFT 303 DNILTGNC 313 CLTGDSLVTLAPG 13 GCKIRATANHKFLT 77 EVFDLTV**PGLHNFI 421 NNIVVHNS 430 DnaE-c NVYDIGV**RRDHNFF C27 NGLIASNC C37 DnaE-n CLSYDTEVLTVEY N13 GSIIKATKDHKFMT N76 CLPEDALVHTAKG 13 ATYPRATLNHRQAV 66 QTYDIEV**DEAHCFY 399 DGYLTHNS 408 NVYDIGV**EKDHNFL C27 SGEIASNC C37 CLSYNTEVLTVEY N13 GSVIRATKDHQFMT N76 HelicaseAMPLSTRVKVPNG 13 GRTADSHPYHLWKT 68 QETCCIALDNDEKLYV 253 DYIVTHNT 263 QQRNSAKVRIVPK 13 GRATDVGTEHLWTL 79 DCTCIEV*DNSEQLYL 304 DFIVTHNT 314 AGVLSSKIKIPGG 13 GRYTDVSPDHLWKV 68 ETQCITI*DHPDHLYI 357 DFIVTHNS 367 MQPLYAKIKVPGG 13 GRYTDAGLDHLWKV 68 EAQCISV*AHPDRLYI 239 DFIVTHNT 249 CFAAGTMVATPKG 13 SETLEVTPGHPFYV 81 LTYNLTV**DIGHTFY 138 LGTWVHNV 149 CVTAETLVATDRG 13 GYRLKLTGDHPVYT 69 PVFDLTE**PENHHFI 362 NGIGVHNC 371 CVTADTRLATQHG 13 GYQIKATAWHEFYT 81 PVYDTTQ**PDGNTVI 366 NGLVTGQC 375 AQPLDAKVKTVDG 13 GREAECCDEHLWRV 68 QAQCVSV*SHPSRTYV 343 DYVVTHNT 353 AQPLDARVRTRTG 13 GRSTECCAEHLWQV 68 LCQCISV*SHPSKLYI 342 QDVVTHNT 352 CVTADTWVMTTAG 13 GPALRLTADHRVRR 70 DVFDVTV**ADIHAFD 372 NGLYVHNC 381 CFAAGTLVATPDG 13 SETLLVTPSHPFYV 81 KTFNLTV**DMGHTFY 138 LRTWVHNT 149 CFAAGTMVSTPDG 13 DESLLVTPGHPFYV 81 KTYNLTV**DVGHTFY 138 LKTWVHNT 149 CLAGDTLITLADG 13 GRSIRATANHRFLT 76 EVFDLTV**PGPHNFV 420 NDIIAHNS 429 CVTAETWVMTDEG 13 GRHLRLTADHLVRK 70 EVFDVQV**PGVNAFD 364 NGFYVHNC 373 CLHRHTQVLTDGG 13 VDGVLMTEDHKILT 62 PVYDLID*VEDGNRFL 287 GFLVAHNC 300 Helicase CLKRGTEVIMFDG 13 GESYTVNESHILSL 68 GVDDYFGF/DGDSRFL 338 FTVTHNTS 349 CLHRHTQVLTDGG 13 VDGVLMTEDHKILT 62 PVYDLID*VEDGNRFL 287 GFLVAHNC 300 CLHRHTQVLTDGG 13 VDGVLMTEDHKILT 62 PVYDLID*VEDGNRFL 287 GFLVAHNC 300 AQPLDSLVLAPTG 13 GSSVECDDEHLWIV 68 PAQCISV*GHPSHAYV 329 NFTVTHNT 339 CVTADTWVHTGEG 13 GYSLRPTANHRVLK 70 TVYDCTV**PGPARFD 362 NGLVAHNC 371 DnaE-c PVYDLGV**ATVHNFV C27 NGLVASNC C37 DnaE-n CLAADTEVLTVEY N13 GRIIRATADHRFMT N76 CVTADTWVHTGEG 13 GYSLRLTANHRVLK 70 TVYDCTV**PGPARFD 362 NGLVAHNC 371 DnaE-c PVYDLGV**ATVHNFV C27 NGLVASNC C37 DnaE-n CLAADTEVLTVEY N13 GRIIRATADHRFMT N76 CVTGDTELLTEKG 13 GFKIKSTEWHKYYR 83 DVYDTTQ**EDYHSLI 376 NGIVTGNC 385 ">ShP-Sfv-2a-2457T-n PrimaseACPLNEPILLADG 13 GRYVDCAGDHLWEV 69 ShP-Sfv-2a-301-n PrimaseACPLNEPILLADG 13 GRYVDCAGDHLWEV 69 PrimaseACPLNEPILLADG 13 GRYVDCAGDHLWEV 69 ECLCIMV*DHPRHLYV 333 GYVATHNT 343 CLTGDALILSDRG 13 QTEIKCTGNHLIRT 66 HVYDIEV**EHNHNFV 130 NGLLVHNC 137 CLGKGTPVMMYDG 13 GMDYRVNESHILSL 68 VGDYFGFTLDGNGRFL 335 DGTVTHNT 345 CFDPETEVVTVDG 13 HTDFLVTPNHRFLT 73 VDYDGMIHCLTVADNH 343 KFNWTGQS 359 CLTGDQRVVTDRG 13 GVEQKVSARHGMPV 71 TVYCPTT*HTEESVFV 364 QGALTFNC 373 CISGDSLISLAST 13 GRTIKATANHRFLT 77 EVFDLTV**PGPHNFV 421 NDIIVHNS 430 RIFDIGL**PQDHNFL C27 NGAIAANC C37 CLSFGTEILTVEY N13 GSVIRATSDHRFLT N76 CLTGDSQVLTRNG 13 NSTVRCTANHLIRT 73 KVYDLEV**EDNHNFV 422 NGLLVHNC 431 CFSGDTLVALTDG 13 GESIICTPDHKFML 80 DVYDIEV**PHTHNFA 426 SGVFVHNS 436 CLAGDTQVMDADR 13 NFSIRATGNHPFLT 80 PVYDIEM**PRHHNFV 133 NGLLVHNS 142 CVTADTWVHTGDG 13 GFSLRLTGNHRVLK 70 PVYDCTV**PGPACFD 361 NGFVVHNC 370 CLAGDTRVRDVDR 13 NFSIRATGNHPFLT 80 PVYDIEM**PRHHNFV 133 NGLLVHNS 142 CVTADTWIHTGDG 13 GFSLRLTGNHRVLK 70 PVYDCTV**PGPSCFD 361 NGLVVHNC 370 CISMDSMILTTEG 13 GIELVNTYNHPLLV 83 PTFDVCM**PKTHSFI 412 NTIVNHNT 421 DnaB intein CLGKGTNVLMYDG 13 GIDYRVNKSHILSL 68 VEYDKV***DDYYGFV 327 DMTVTHNT 345 AVYDIGL**AADHNFV C25 NGAIAANC C36 CLSGETAVMTVEY N13 GSTICATPDHRFMT N76 CAAYDTLVLQKDG 13 GRFVETTITHPFLT 75 QVYDLTV**PETHNFV 1978 NDICLHNT 1987 CLTGESLICLADG 13 GKLIRATANHPFFS 76 EVFDLTV**PGLHNFV 169 NEIVVHNS 178 CLPKGTLIDQPDG 13 GTVIYSGKNHRFLT 72 ECFDLEMEDQSSPYFL 1358 EGVVVHNC 1366 CLSGSTKVIDAAT 13 NRKVCATDDHLFYT 81 EVFDLTI**PETHNFI 420 NDFIVHNC 429 CLTYETEIMTVEY N13 GTVIRATPEHKFMT N76 NVYDIGV**TKDHNFV C27 NGLIASNC C37 CLTYETEIMTVEY N13 GTVIRATPEHKFMT N76 NVYDIGV**TKDHNFV C27 NGLIASNC C37 CFAGNQKVILADG 13 NETIICTPDHLFML 80 DVYDIEV**PHTHNFA 235 SGVFVHNS 245 CFDSKTEILTEAG 13 HRDFCVTPNHWMYV 72 KVYCVNV**TNHVVFV 326 RAAWCGQC 337 SLTGDQKVLYYIA 13 GKQIKITEDHSLFT 84 YVYDFSV**PNYENFI 420 YNVFAHNT 431 CLPEGALVHTASG 13 DGYFECTPDHKVAV 67 STYDIEV**ASIHEFV 386 QGILVSNS 395 CHSGDTLVSTDQG 13 GMQMRCTGDHQHFT 75 VVYDLHV**PLTNSFI 365 NGCLTHNC 374 CVSGDTLLITRDS 13 GSYLDVTEYHRFFV 68 GLHDTYC**FEEPEFH 312 GNALTGNC 324 CLDKTALRIFNQG 13 GRKLRMTPNHRMSV 73 YSYDFAI**EGINDND 369 GALKSHNT 382 CVLHDTEIYVNGM 13 GSSITITCRHKLFI 93 WVYDFEV**SKYHNFV 461 NNIICHNT 470 CLSGNTKVRFRYS 13 GKEIRATLEHQFWT 105 ITYDLEV*EHPEHNFI 290 NGLVVHNS 299 CVDEETEILTTDG 13 THSSLTTPQHRWPV 74 RVWCVRT**PNATWLA 330 TVYFTGNS 342 CLTADTYVWTDRG 13 GRQVTVTRNHPLRV 86 PTFDLMV**PRTHSFL 414 NGILSHNT 423 CMHYDTLVTLADG 13 GAQFTATPNHLIRT 83 RKFDIEV**EGNHNYF 349 DGVMVHNS 358 CLAEGSLVLDAAT 13 GRTLVLTPDHPLLT 74 RTFDLRV**PPFANFV 415 EDLVVHNS 424 CLPARARVVDWCT 13 GRVLEATANHPVYT 79 EVFDLTV**EGTHTFV 415 EDVIVHNS 424 CLHPDTLVHTDRG 13 GLEVQGTLNHKLKV 76 LTLDLSV**EGNHTYL 430 NGLVSHNT 439 CFVGSTRIPTERG 13 GLEVTLTPDHLLLT 86 PVYDLTE**PVTHSLI 399 NGLVAHNC 408 CLAEGSLVLDAAT 13 GRTLVLTPDHPLLT 74 RTFDLRV**PPFANFV 415 EDLVVHNS 424 CLPARARVVDWCT 13 GRVLEATANHPVYT 79 EVFDLTV**EGTHTFV 415 EDVIVHNS 424 CLHPDTLVHTDRG 13 GLEVQGTLNHKLKV 76 ILTLDLS**EGNHTYL 417 NGLVSHNT 439 CFVGSTRIPTERG 13 GLEVTLTPDHLLLT 86 PVYDLTE**PVTHSLI 399 NGLVAHNC 408 AVYDIGL**AGDHNFL C26 NGAIAANC C36 CLSGETAVMTVEY N13 GSTICATPDHRFMT N76 U>Block ABlock BBlock FBlock G SLPPWEPIVVRRG 13 GRSIDLTGSHSIYR 92 FVYDLSV**EGDENFF 458 GWILVHNS 449 CVTGDTKIFTSEG 13 GFEIKVTGDHKIYS 74 DVYDLV**EPSTHSFV 360 NGIVVHNC 367 SufB (Fac Pps1) CLPEDELISQGDK 13 GNAFRATSEHPVLS 70 EVYDDIV**YNMEVET 343 KGFAVHNC 357 CVTGDTKIFTSEG 13 GFEIKVTGDHKIYS 74 DVYDLV**EPSTHSFV 360 NGIVVHNC 367 %29">Fac-typeI SufB (Fac Pps1) CLPEDELISQGDK 13 GNAFRATSEHPVLS 70 EVYDDIV**YNMEVET 343 KGFAVHNC 357 CVHGDTRVTLADG 13 GRELDVTPSHPLFV 91 WVYDLEI**EGTHNYL 469 NGVVSHNS 478 CFHPDTRLWYEDE 13 DRTLRVTPDHTMLR 96 HVYCLTV**ADTHRVA 172 EGTYVGQC 181 CFTPDTDVLTPEG 13 KMDFRVTPNHRMLV 74 GVYCVTV**ADNHTLM 397 KFQFVGQS 410 CLTADSDVLVRSE 13 RGAVTVTDDHPMYI 98 PVYDLTV*SENAPNFA 528 GGAVVHNS 538 CVRGDTTVALADG 13 GHRLTVTPSHPLFV 91 WVYDLEV**EGTHSYL 174 DGVVSHNS 183 CFHPETNVWFRDE 13 GRELTVTPDHSMRR 100 HTYSLTV***AETNTL 186 NGLFTGQC 196 SVTGDRPVVVRDP 13 FGESTTTRDHSYVV 107 YVYDLSV**EENENFV 427 GGIVLHNT 438 CFSGDTEIALASG 13 GEVIRCTPDHEFML 80 DVYDLEV**PVTHNFA 206 SGVFVHNS 216 CVSGETDIALVEG 13 GRSVTVTPSHPVFV 91 WVYDLEV**EGTHAYL 201 NGVLSHNS 210 CVTGETRIHTTDG 13 GKQLEASVNTPVLT 90 EVFDLTV**PNTQNFI 513 GGIVTHNT 522 CVTGETLVSLADG 13 LTGRPVTAIHQYDS 72 DVYDLTV**SGTHNFV 204 NGMIVHNS 212 SYHPRSEVLLADG 13 GRSVLVTPEHPMFI 97 WVYDITV**EPTNTFI 574 SGVVLHNS 573 CFHPETKIWFRDT 13 GREITITPDHEMHI 102 YTYCLTV**SETHSLI 521 NDLSQKQC 530 SVAADSRLVAVSP 13 GRSLDITDEHSLFR 100 VDYDGYL**YDLQVGG 531 NWLYAHNS 545 CLPSDARIQMADG 13 GTSLRSSGDHRIMI 71 TTYDIET***TTHNFV 425 DDCLVHNC 435 CFTPDTNVLTPNG 13 EIDFRVTPNHRMLV 74 GVYCVTV**ADNQTLL 346 TFQWTGNS 359 SVTGDRPVVVRDP 13 YGESTTTRDHSYIT 108 YVYDLSV**ATNQNFV 421 GGLVLHNT 432 CVTGSTPILTNKG 13 GATLTVTPEHKLLI 82 RVYDLTV**PGVRNYV 313 IPTVMHNT 324 CLTADSTVMLKEK 13 GCSIRGTPNHRLMV 72 TVYDITV**ADNHEYV 400 DGIISHNS 409 CVEENSLVSTDEG 13 GFNIAATPNHRFRT 78 YTKDISV**PSNNTYI 430 DGFVTHNT 439 SLTPTQTLLIRRD 13 GRTLEITGNHSLFS 95 YVYDISV**PGASGHD 477 GAICVKNS 493 SIEADESIVIRRD 13 GRSIRATKAHSFVT 100 YVYDLSV**SGLETFT 205 EGVVTHNT 215 CLNANTEILQESG 13 GLKITTTPNHLFLV 72 YAYDIELPDDGTNDHY 516 NGFIVHNS 525 CLSTDSNILTDDG 13 GRILKGSADHPILL 77 KLYDVSI*LHQSHNFI 477 NGVVVHNC 486 CFHPDEILFVDFG 13 GREIKITKDHPVVV 86 EVYSVET**DNNLLIS 455 YGLLIHNC 464 CYDDETEVLTESG 13 QVDLAVTPNHRMYV 72 TIYCLEV**PNHTLYV 347 IPVWCGNS 359 CFAGDTEITVSDG 13 GRVLTVTPDHAMLV 99 RVYCLTV**AENHTLV 157 NGIFCGQC 166 CFHGDTLIEIYAD 13 GKNLLVTPDHAMLV 99 RVYCLTV**DRDHNVV 157 NGIFTGQC 166 CLHPDTYVILPDG 13 FSELITTGEHKLFV 72 YVYDLEV**EDYHNFI 491 NLIINHNS 500 CLNANTEILQESG 13 GLEITTTPNHIFLV 72 YAYDIEL*PDDGSNSH 490 NGFIVHNS 502 CVPPDTLLILENG 13 PEEIILTPEHPVYA 70 FVYNLEV**EDDSSYV 384 VSGTLHNC 393 CLMPHEKVLTEYG 13 WHSITTTPEHPFLT 90 YVYDLTT***ETHNFI 538 NGIVVHNT 547 ALAYDEPIYLSDG 13 RREITLTHDHPVYI 101 HIYDLTV**EDNHTYI 157 EGFAVSNC 169 CIEGDAKILTDRG 13 KDTIKITPDHKFPV 83 EVYNITV/NEFNHNYV 399 TPIVVFNC 413 CHPKGTKVVVKGK 13 VNGLKCTPNHKIPL 64 EVYDLTL**EGRPYYF 361 NGILTHNS 370 SILPDEYLTIIEE 13 GRTIKVTRGHSLFK 100 YVYDLSV**EDNENFL 468 NNIYAHNS 477 CLTGDTKVIVNGE 13 GRELKVTTYHPLLI 85 TIYDLHV**PRYHNFI 538 LPTILHNT 549 SVSKDTPILVKID 13 GGYIELTGNHSIMM 91 FVYDVSV**PNNEMFF 426 VPILLHNS 437 CLTGDAKITLPDE 13 GREIEATGDHKFLT 78 DVYDITC**HKDPSFI 535 NGFVSHNC 544 SLGRDELIFIKEG 13 GTSIIVTEDHSLFN 103 YVYDLSV**EDNENFI 444 TGILCHNT 454 SLPYDEKILIFEN 13 GKKVRVTGDHSVFT 101 YVYDISV**EGTENFI 523 GFICLHNT 534 RtcB (Mja Hyp-2) CLTSNSKILTDDG 13 GRVLEGSKDHPVLT 76 KLYDVGI*VSKEHNFI 480 NSIVVHNC 489 SVDYNEPIIIKEN 13 NKKVRVTRSHSVFT 97 YAYDLTV**PNAENFV 325 GGFVLHNT 336 CFHPDEVLFIDRG 13 GREIKITKDHPVVI 81 YVYSVET**ENSLLIT 446 YGILIHNC 455 CLTPDTYVVLGDG 13 NYELKATPDHCLLV 77 YVYDLSI**KHNQNFI 486 NGVISHNC 495 CVDGDTTVLLDGK 13 GREIIATEDHPFYT 78 YVYDITT*ISETHNFI 444 NGFLTGNC 453 SLPYEEKIIIKEG 13 GREITATPYHSFVI 98 YVYDISV**EGLETFT 462 DGVLTHNT 472 SIPGDEVVWAKVD 13 GREVIVTEDHSVFT 82 YVYDVV*EVKLGHNFV 385 QGVLLHNS 395 CVAPETKICLADG 13 GRSIRTTPEHKFLV 96 YVYDFTV**EEHHNFA 514 EGFVVHNT 523 SVSADTPILVRRG 13 DGTIELTGNHAVMV 89 YVYDVSV**PGNEMFF 295 VPVLLHNS 306 CLAPGTKILTEHG 13 GLTIEGSEDHPVLT 80 RFYDIGV*CHGAHNFI 474 DGVVVHNC 483 CFAPGTRVITASG 13 GAELVVSEDHKFLV 96 YLYDVTVV**PDHTLV 508 NGIITSNC 518 CVSGDTIVMTSGG 13 GHCLRLTHDHRVLV 74 DVTDATV**YGASAFT 126 NGFIVHNC 135 ILYDLST**ESGKFYV C23 NGLVLHNT C31 SIMDTEIEVIENG N13 INGITLSANHLVLS N83 CVDGDTSVTLASG 13 GRELEVTPSHPLFV 90 WVYDLEV**ESTHSYL 331 NDVVSHNS 340 CFSGDTDVATPDG 13 THDFKVTENHRFLL 74 EDHDGDVHCITAEDNH 386 HLQWVGQS 402 CFTPDTEVLTPDG 13 EIDFRVTPNHRMLV 74 GVYCVTV**EDNHTLL 397 KFQFVGQS 410 SIPADEQVVVRRN 13 GRSIRATKAHSFVT 98 YVYDVSV**EGLETFT 483 DGVVTHNT 493 CVDYETEVVLGNG 13 GKRIRVTPTHPFFV 98 WVYDLQV**PGYHNFL 156 NGIFVHNS 165 CVAPETLIITENG 13 GKQITVTPETKLLT 92 HVYDLTV**EGSHSFI 260 NGFVVHNT 269 CLLPDEKVVVPSV 13 WHGVTVTPEHPFLT 91 YVYDLTT***ETHNFI 386 NGILVHNT 395 ALYYFSEIQLPNG 13 GKELVLTQDHPVFV 100 YLYDLTV**DINHNYV 188 NGIVVSNC 197 CFSGEETVVIREN 13 DYWFALTPDHKVYT 98 VTYNLTT***EKGNLL 325 NGLFVKNS 334 CFPPTEEAVFKFG 13 GRTIRTTPEHKFFV 97 YVYDLEV*ENEGHSFV 446 DGILVSNC 456 CFPGDTRILVQID 13 GRSFETTVDHPVLV 97 FVFSLNA**KKYHNVI 176 ENIVTHQC 186 CLTGDAKVIANGE 13 GRELKVTPYHPLLV 85 VIYDLHV*PKYHNFIG 490 LPTVLHNT 500 CVTGDTKVYTPDE 13 GRIIEATGDHMFLT 78 DVYDVTC**ARDHSFI 600 NGLVSHNC 609 CIDGNAKIIFENE 13 GTKILTSPWHPFFV 103 TFYDLTV**DKYQNYL 388 GMIFVHNT 400 CFTGDTRILTEKG 13 GYELKVTGDHKFLV 71 HVYDLQV**EDVHLLT 430 NGIYTSNS 439 CVVGETRILTPEG 13 DKQVKYETVHGNAV 69 LVYDFTV**PEHHMYI 374 NGFMSHNC 383 RtcB (Pab Hyp-2) CLAPGSKVLTEHG 13 GRIIEGSEDHPVLT 80 KFYDIGV*YHEAHNFI 428 NGIVVHNC 437 CVDGDTLVLTKEF 13 GRKIKVTPIHKLFT 93 EVYDVTT***ETHNFI 420 MPTLLHNT 430 CVTGDTRVLTRDG 13 GFEIKATGDHKLLV 103 VVYDFGV**PDYHRYI 384 EGIVSHNC 393 CVAPDSLVVVNDK 13 GKEITVTPETKLLT 94 YVYDLTV**EGSHSFI 359 NGFVVHNT 368 CLLPEEKVVLPEI 13 WYSVTVTPEHPFLT 91 YVYDVTT***ETHNFV 379 NGILVHNT 388 ALYDFSVIQLSNG 13 GNEIILTRNHPLAF 102 YVYDLTV**EDDHNYV 514 NGILVSNC 523 CFSGEEVILIEKD 13 DYWLALTPEHKVYT 98 VTYNVTT***ETGNLL 393 NGLFVKNS 402 CLTGDTKVIANGQ 13 GRELKVTPYHPLLV 85 IIYDLHV**PGYHNFI 515 MPTVVHNT 526 CIDGKAKIIFENE 13 GTKILTSPWHPFFV 103 TFYDLTV**ENYQNYL 443 GMIFVHNT 455 CVVGDTRILTPEG 13 EEKVEYETVHGRVL 69 IVYDFTV**PNYHMYI 374 NGFMSHNC 383 RtcB (Pfu Hyp-2) CLAPGTKVLTEHG 13 GTLIEGSEDHPVLT 80 RFYDIGV*YHEAHNFI 473 NGIVVHNC 482 CLHPDTLILTSQG 13 GTELYLTADHPVLV 72 KVYDLVV**ENYHNFI 365 NGIAVHNC 374 CVDGDTLILTKEF 13 GRKIKVTPIHKLFT 93 EVYDITT***ETHNFV 415 MPTLLHNT 426 CVDYDTEVLLGDG 13 GREIRVTPTHPFFT 98 WVYDLQV**PEHHNFI 160 NGIFVHNS 169 CVAPDTLINTDNG 13 GRSIALTRETKLLT 91 YVYDLTV**EGSHNFV 152 NGFIVHNT 261 CLLPEERVILPDY 13 WHSVAVTPEHPFLT 91 YVYDVTT***ETHNFI 436 NGILVHNT 445 ALYDFSIIQLSNG 13 GNEVILTRSHPLFA 101 YVYDLTV**EDDHNYV 512 NGILVSNC 520 CVSGDSKVLTEKG 13 GFEVKCTREHRFLT 71 PVYLDVA**YGIINSE 462 NGFVSKNS 476 CFSGEEVIIVEKG 13 DYWLAVTPDHKVFT 98 VTYNVTT***ETGNLL 466 NGLFVKNS 475 SILPDEWLPIVEN 13 GRRIKITSGHSLFS 100 YVYDLSV**EDNENFL 450 GLLYAHNS 461 CFPGDTRILVQIN 13 GSSFETTVDHPVLV 97 FVFSLNA**KKYHTVI 157 ENIVTHQC 167 CLTGDTKVIANGQ 13 GRELKVTPYHPLLV 85 IIYDLHV**PGYHNFI 515 MPTVVHNT 526 CVVGDTRILTPEG 13 GYEIIATLDHKIMT 113 IVYDLTV**PGIHSYI 377 NGFISHNC 386 CFARDTEVYYEND 13 GYSLKVTPSHPVLL 97 WVYDLVI**PETHNFI 163 NGLVLHNT 173 RtcB (Pho Hyp-2) CLAPGTRVLTEHG 13 GKVIEGSEDHPVLT 80 KFYDIGV*YHSAHNFI 382 NGIVVHNC 391 CVDGDTLVLTKEF 13 GRKIKVTPIHRLFT 93 EVYDVTT***ETHNFV 366 MPTLLHNT 377 CVTPDTLVSLSDG 13 GHEIKATPDHGLLV 75 KLYDFTT***TTENFI 402 NGIVSHNC 411 SILPEEWVPLIKN 13 GRKITITEGHSLFV 100 YVYDLSV**DEDENFL 527 GFLYAHNS 538 CVTGDTPVLLADG 13 GREVKVTPVHKLFR 92 DVYDVTT*PDFGSNFV 323 GAILLHNT 334 SVSYDTPVLIRDP 13 GGKLEATGSHSVFV 91 YVYDISV*PITEAFFG 471 IPILLHNT 481 SYHKDFKIMLADG 13 GAEIIVTPEHPVLI 97 WVYDITI**EPYHLFV 342 DGLILHNT 351 VMA CVSGDTPVLLDAG 13 GREVRVTPVHKLFV 92 DVYDLMV*PDYGYNFI 163 GLIVLHNT 174 CVSGDTPVLLDAG 13 GREVRVTPVHKLFV 93 DVYDLMV*PDYGYNFI 164 GLIVLHNT 175 Pol-1 (Tsp-TY Pol-1) CHPADTKVIVKGK 13 INGLKCTPNHKVPV 64 EVYDLTL**EGNPYYF 352 NGILTHNS 361 Pol-2 (Tsp-TY Pol-2) SILPNEWLPIIEN 13 GRKIHITRGHSLFT 100 YVYDLSV**EDNENFL 528 GLLYAHNS 539 Pol-3 (Tsp-TY Pol-3) SVTGDTEIIVKRN 13 SWYIDVTEDHSLIV 92 YVYDIEV**EGTHRFF 149 NGILVHNT 158 CHPADTKVIVKGK 13 INGLKCTPNHKLPV 64 KVYDLTL**EGTPYYF 352 NGILTHNS 361 SVTGDTEVTIRRN 13 SWYLDVTEDHSLIG 92 YVYDIEV**EGTHRFF 381 NGILVHNT 390 SLLPEEWIPLVEN 13 GRRITVTEGHSLFA 100 YVYDLSV**EEDENFL 527 GLLYAHNS 538 SVTGETEIIIKRN 13 SWYLDVTEDHSLIG 92 YVYDIEV**EGTHRFF 381 NGILVHNT 390 CVAPDSIIKTNLG 13 GLSITVTPETKLLT 85 YVYDLTV**EGSHSFI 132 NGFVVHNT 141 SYHHDFELLLADG 13 GREITVTPEHPVMV 97 WVYDVTV**EPHHLFV 327 HGLVLHNT 336 CMHPDTYVVTKSG 13 TVPVKITPEHMVWV 69 DVYNLEV**EGDESYS 396 VGFIVHNS 404 CLLPDEKVILPEH 13 WHSVSVTPEHPFLT 91 YVYDVTT***ETHNFV 538 NGILVHNT 547 ALYDFSVIQLSNG 13 GNEVILTKTHPFFV 101 YLYDLTV**DEDHNYV 515 NGILLSNC 524 CVSGDSKILTGKG 13 GFEIKATKEHKFLT 71 AYIDVA***YGIINSE 512 EGFISKNS 526 Pol-1 (Pko Pol-1) CHPADTKVVVKGK 13 INGLKCTPNHKLPV 64 KVYDLTL**EGTPYYF 352 NGILTHNS 361 Pol-2 (Pko Pol-2) SILPEEWLPVLEE 13 GRRIKITSGHSLFS 100 YVYDLSV**EDNENFL 526 GLVYAHNS 537 CFPGDTRILVQIN 13 GRSFETTVDHPVLV 97 FVFSLNA**KKYHNVI 465 ESIVTHQC 475 CLTGDAKVIANGR 13 GRELKVTPYHPLLV 85 VIYDLHV**PGYHNFI 530 MPTVVHNT 541 CIDGNAKIIFEND 13 GTRVLTSPWHPFFV 103 TFYDLTV**ERYQNYL 443 GMVFVHNT 455 CVVGDTRVLTPEG 13 EEEVKYETVHGKAL 69 IVYDFTV**PEHHSYI 361 NGFMSHNC 383 CFAKDTKVYYEND 13 GYLLRITLLHPVLV 97 WVYDLVI**PETHNFI 473 NGLVLHNT 483 CLHPDSLIPTPQG 13 RTELYLTADHPVLV 72 KVYDLVV**DQYHNFI 503 NGVVVHNC 512 CVTPDTLVSLADG 13 GHEIKATPDHGLLV 75 KLYDFTT***TTENFL 481 NGAVSHNC 490 SILPNEWLPIIEN 13 GRKINITAGHSLFT 100 YVYDLSV**EDNENFL 528 GLLYAHNS 539 SVSGESEIIIRQN 13 SWYIDVTEDHSLIG 92 YVYDIEV**EETHRFF 382 NNILVHNT 391 SILPDEWVPLLID 13 GRKIKVTEGHSLFT 98 YVYDLSV**EENENFL 525 GMIYAHNS 536 SVTGDSEVIIRRN 13 SWYLDVTEDHSLIG 93 YVYDIEV**EGTHRFF 382 NGILVHNT 391 SILPDEWLPLLVN 13 GRNIKVTEGHSLFA 98 YVYDLSV**EENENFL 525 GMLYAHNS 536 SVAGNTEVIIRRN 13 SWYLDVTEDHSLIG 92 YVYDIEV**EGTHRFF 381 NGILVHNT 390 SLLPEEWIPLVEN 13 GRRITVTEGHSLFA 100 YVYDLSV**EEDENFL 527 GLLYAHNS 538 SVTGETEIIIKRN 13 SWYLDVTEDHSLIG 92 YVYDIEV**EGTHRFF 381 NGILVHNT 390 SLLPEEWVPVIVG 13 GRRIRVTTGHSLFA 100 YVYDLSV**EEDENFL 527 GLLYAHNS 538 SLLPEEWVPVIVG 13 GRRIRVTTGHSLFA 100 YVYDLSV**EEDENFL 527 GLLYAHNS 538 CVSGETPVYLADG 13 GRSVSVTPVHKLFV 95 DVYDLSV*PEYGRNFI 176 GLLVLHNT 187 SILPDEWIPLLIN 13 GRKIKVTAGHSLFT 98 YVYDLSV**EENENFL 523 GMLYAHNS 533 CFTGNTEISTDRG 13 SDAISCTLNHEFFV 72 KVYNLEI*DNPTHSYN 436 NLISVSNC 435 CVTADTWVTTAEG 13 GFELRLTADHPVMK 70 KVYDVKI**PGINAFN 299 NGFVVHNC 308 SLPGDEKILIKSG 13 GKKVRVTAGHNFFC 102 ETYDIAT*DTSTQNFI 580 GFLFVHNT 591 SYHPLTEILLADG 13 DREIIVTPEHPVFI 94 YVYDVTV**EPYHCFV 159 QGVILHNS 168 (G,V,L,I,A,M) residues (D,E) residues (F,Y,W) residues (S,T,C) block, 1 or more AA not shown absent residue into Block F in almost all inteins letter amino acid code cellpadding=2 cellspacing=0> Home Info mechanism e.php">Splicing motifs Endo motifs registry alleles properties .neb.com/~vincze/blast/index.php?blastdb=inbase">Blast against InBase you have an intein? data >Bibliography links target="_parent">NEB Home

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InBase, The Intein Database: Splicing Motifs

InBase Reference:

Splicing Motifs

The entire intein sequence is present in
N- and C- terminal intein motifs (Blocks
The position in the
An individual or amino acid group designation
Residues in red represent

Intein Consensus Ch..Dp.hhh..G
Eucarya
Intein APMV Pol Abr PRP8 Aca PRP8 Afu-Af293 PRP8 Afu-FRR0163 PRP8 Ani-FGSCA4 PRP8 Avi PRP8 Bci PRP8 Bde-JEL197 RPB2 Bde-JEL423 Bde-JEL423 Bde-JEL423 RPC2 Bde-JEL423 CIV RIR1 CV-NY2A CV-NY2A RIR1 CZIV RIR1 Cba-WM02.98 PRP8 Cba-WM728 PRP8 Ceu ClpP Cga PRP8 Cgl VMA Cla PRP8 Cne-A Cne-AD Cne-JEC21 PRP8 Cpa ThrRS Cre RPB2 Cst RPB2 Ctr ThrRS Ctr VMA Ddi RPC2 Dhan GLT1 Dhan VMA Eni PRP8 Eni-FGSCA4 PRP8 Gth DnaB HaV01 Pol Hca PRP8 IIV6 RIR1 Kex-CBS379 VMA Kla-CBS683 VMA Kla-IFO1267 VMA Kla-NRRLY1140 Lel VMA Nau PRP8 Nfi PRP8 Ngl-FR2163 PRP8 Ngl-FRR1833 PRP8 Nqu PRP8 Nspi PRP8 Pan CHS2 Pan GLT1 Pbl PRP8-a Pbl PRP8-b Pbr PRP8 Pch PRP8 Pex PRP8 Pgu GLT1 Pgu-alt GLT1 Pno GLT1 Pno RPA2 Ppu DnaB Pst VMA Ptr PRP8 Pvu PRP8 Pye DnaB Sas RPB2 Sca-CBS4309 VMA Sca-IFO1992 VMA Scar VMA Sce VMA Sce-DH1-1A VMA Sce-OUT7091 VMA Sce-OUT7112 VMA Sda VMA Sex-IFO1128 VMA She Sja VMA Spa VMA Spu PRP8 Sun VMA Tgl VMA Tpr VMA Ure PRP8 Vpo VMA WIV RIR1 Zba VMA Zbi VMA Zro VMA
Eubacteri
Intein AP-APSE1 dpol Aae RIR2 Aave Hyp-1721 Aave RIR Ace RIR1 Aeh DnaB-1 Aeh DnaB-2 Aeh RIR1 Aha DnaE-c Aha DnaE-n Aov DnaE-c Aov DnaE-n Arsp-FB24 DnaB Asp DnaE-c Asp DnaE-n Ava DnaE-c Ava DnaE-n Avin RIR1 BIL Bce DnaB BsuP-M1918 RIR1 BsuP-SPBc2 RIR1 Cag RIR1 Cau SpoVR CbP-C-St RNR CbP-D RNR Cbu DnaB Cch RIR1 Chy RIR1 Ckl PTerm Cth ATPase BIL Cth TerA Cwa DnaB Cwa DnaE-c Cwa DnaE-n Cwa PEP Cwa RIR1 Dge DnaB Dha-DCB2 RIR1 Dha-Y51 RIR1 Dra RIR1 Dra Snf2-c Dra Snf2-n Dra-ATCC13939 Dvul ParB Fal DnaB Fsp-CcI3 RIR1 Gob DnaE Gob Hyp Gvi DnaB Gvi RIR1-1 Gvi RIR1-2 Hhal DnaB-1 Hhal DnaB-2 Kra DnaB LP-phiHSIC MP-Aaphi23 MupF MP-Be DnaB MP-Be gp51 MP-Catera gp206 MP-Mcjw1 DnaB MP-Omega DnaB MP-U2 gp50 Mav DnaB Mav-104 DnaB Mav-PT DnaB Mbo Pps1 Mbo RecA Mbo Mbo-1173P DnaB Mbo-AF2122 DnaB Mca MupF Mca RIR1 Mch RecA Mex Helicase Mex TrbC Mfa RecA Mfl GyrA Mfl RecA Mfl-ATCC14474 Mfl-PYR-GCK DnaB Mga GyrA Mga RecA Mga Mgi-PYR-GCK DnaB Mgi-PYR-GCK GyrA Mgo GyrA Min DnaB Mkas GyrA Mle DnaB Mle GyrA Mle RecA Mle Mma GyrA Mmag Msh RecA Msm DnaB-1 Msm DnaB-2 Msp-KMS DnaB Msp-KMS GyrA Msp-MCS DnaB Msp-MCS GyrA Mthe RecA Mtu Mtu-CDC1551 DnaB Mtu-F11 DnaB Mtu-H37Ra DnaB Mtu-H37Rv DnaB Mtu-H37Rv RecA Mtu-So93 RecA Mvan DnaB Mvan GyrA Mxa RAD25 Mxe GyrA Nfa DnaB Nfa Nfa15250 Nfa RIR1 Npu DnaB Npu DnaE-c Npu DnaE-n Npu GyrB Nsp-JS614 DnaB Nsp-JS614 TOPRIM Nsp-PCC7120 DnaB Nsp-PCC7120 Nsp-PCC7120 Nsp-PCC7120 RIR1 Oli DnaE-c Oli DnaE-n PP-PhiEL PP-PhiEL ORF11 PP-PhiEL ORF39 PP-PhiEL ORF40 Pfl Fha BIL Plut RIR1 Pna RIR1 Pnuc DnaB Posp-JS666 DnaB Posp-JS666 RIR1 Pssp-A1-1 Fha Psy Fha Rma DnaB Rsp RIR1 SaP-SETP12 dpol SaP-SETP3 SaP-SETP3 dpol SaP-SETP5 dpol Sav Helicase Sel-PC6301 RIR1 Sel-PC7942 Sel-PC7942 Sel-PC7942 RIR1 Sel-PCC6301 Sel-PCC6301 Sep RIR1 ShP-Sfv-5 Spl DnaX Sru DnaB Sru PolBc Sru RIR1 Ssp DnaB Ssp DnaE-c Ssp DnaE-n Ssp DnaX Ssp GyrB Ssp-JA2 DnaB Ssp-JA2 RIR1 Ssp-JA3 DnaB Ssp-JA3 RIR1 StP-Twort ORF6 Susp-NBC371 Tel DnaE-c Tel DnaE-n Ter DnaB-1 Ter DnaB-2 Ter DnaE-1 Ter DnaE-2 Ter DnaE-3c Ter DnaE-3n Ter GyrB Ter Ndse-1 Ter Ndse-2 Ter RIR1-1 Ter RIR1-2 Ter RIR1-3 Ter RIR1-4 Ter Snf2 Ter ThyX Tfus Hyp-2914 Tfus RecA-1 Tfus RecA-2 Tth-HB27 DnaE-1 Tth-HB27 DnaE-2 Tth-HB27 RIR1-1 Tth-HB27 RIR1-2 Tth-HB8 DnaE-1 Tth-HB8 DnaE-2 Tth-HB8 RIR1-1 Tth-HB8 RIR1-2 Tvu DnaE-c Tvu DnaE-n
Archaea
Intein Ape APE0745 Fac-Fer1 RIR1 Fac-Fer1 Fac-TypeI RIR1 Hma CDC21 Hma Pol-II Hma PolB Hma TopA Hsa-NRC1 CDC21 Hsa-NRC1 Pol-II Hvo PolB Hwa GyrB Hwa MCM-1 Hwa MCM-2 Hwa MCM-3 Hwa MCM-4 Hwa Pol-II-1 Hwa Pol-II-2 Hwa PolB-1 Hwa PolB-2 Hwa PolB-3 Hwa RCF Hwa RIR1-1 Hwa RIR1-2 Hwa Top6B Hwa rPol A'' Maeo-N3 Helicase Maeo-N3 RtcB Maeo-N3 UDP GP Memar MCM2 Memar Pol-II Mhu Pol-II Mja GF-6P Mja Helicase Mja Hyp-1 Mja IF2 Mja KlbA Mja PEP Mja Pol-1 Mja Pol-2 Mja RFC-1 Mja RFC-2 Mja RFC-3 Mja RNR-1 Mja RNR-2 Mja Mja TFIIB Mja UDP GD Mja r-Gyr Mja rPol A' Mja rPol A'' Mka CDC48 Mka EF2 Mka RFC Mka RtcB Mka VatB Mth RIR1 Neq Pol-c Neq Pol-n Nph CDC21 Nph PolB-1 Nph PolB-2 Nph rPol A'' Pab CDC21-1 Pab CDC21-2 Pab IF2 Pab KlbA Pab Lon Pab Moaa Pab Pol-II Pab RFC-1 Pab RFC-2 Pab RIR1-1 Pab RIR1-2 Pab RIR1-3 Pab Pab VMA Par RIR1 Pfu CDC21 Pfu IF2 Pfu KlbA Pfu Lon Pfu RFC Pfu RIR1-1 Pfu RIR1-2 Pfu Pfu TopA Pfu VMA Pho CDC21-1 Pho CDC21-2 Pho IF2 Pho KlbA Pho LHR Pho Lon Pho Pol I Pho Pol-II Pho RFC Pho RIR1 Pho RadA Pho Pho VMA Pho r-Gyr Psp-GBD Pol Pto VMA Smar 1471 Smar MCM2 Tac-ATCC25905 Tac-DSM1728 VMA Tag Tag Tag Tfu Pol-1 Tfu Pol-2 Thy Pol-1 Thy Pol-2 Tko CDC21-1 Tko CDC21-2 Tko Helicase Tko IF2 Tko KlbA Tko LHR Tko Tko Tko Pol-II Tko RFC Tko RIR1-1 Tko RIR1-2 Tko RadA Tko TopA Tko r-Gyr Tli Pol-1 Tli Pol-2 Ton-NA1 Pol Tpe Pol Tsp-GE8 Pol-1 Tsp-GE8 Pol-2 Tsp-GT Pol-1 Tsp-GT Pol-2 Tsp-OGL-20P Pol Tthi Pol Tvo VMA Tzi Pol Unc-ERS PFL Unc-ERS RIR1 Unc-ERS RNR Unc-MetRFS MCM2

CONSENSUS LINE KEY:

h hydrophobic residues
a acidic
r aromatic
p polar
/ to align
- motif
. non-conserved
* gap introduced
underlined residues conserved
capital letters single

Last database update: 04/02/08

InBase	Background	Splicing	DOD
Intein	Intein	Selected
Do	Submitting	Intein

Perler, F. B. (2002). InBase, the Intein Database. Nucleic Acids Res. 30, 383-384. the individual intein files. A, N2, B, N4, F, and G in the figure above) are involved in protein splicing and not endonuclease activity. intein of the last amino acid in each block is listed to the right of the block. (see The Consensus Key below) in the consensus line indicates that the amino acid (upper case letter) or group (lower case letter) is present in a majority of the first 38 inteins sequenced, excluding the highly similar allelic inteins Perler 1997. Dots in the consensus motifs indicate the position of non-conserved amino acids. An asterisk (*) indicates a space added to better align the C-terminal end of Block F and a slash (/) indicates one or more residues were deleted from the block at the position of the slash to better align the C-terminal end of Block F. deviations from the conserved residues normally found in those positions in the block. Block A Block B Block F Block G G..h.hT..H.hhh rVYDLpV**a..HNFh NGhhhHNp