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InBase, The Intein Database: Selected Properties
InBase Reference: Perler, F. B. (2002). InBase, the Intein Database. Nucleic Acids Res. 30, 383-384.


This table includes selected intein characteristics. A more complete set of intein properties can be found by clicking on the intein name.
A table of experimental and theoretical inteins can be found in the Intein Registry.
For a complete description of each column, see the On-line Submission of Intein Data Section.
Intein size does not include the conserved Ser/Cys/Thr at the beginning of the downstream extein.
Flanking extein residues are separated from intein residues by a slash (/).
The Endo Activity column lists names of experimentally demonstrated homing endonucleases.
The Endo Motif column indicates the presence of signature motifs from DOD (LAGLIDADG) and HNH families of homing endonucleases, but does not indicate endonuclease activity. The absence of a large endonuclease domain between intein Blocks B and F is indicated as 'none' and the presence of a large sequence that does not have homing endonuclease signature motifs is indicated as 'unknown'.
The extein residue preceding the intein is indicated in the Location in the Extein column.
The Insert Site column lists conserved extein motifs interrupted by or adjacent to the intein, as well as extein insertion site names using the consensus found in http://blocks.fhcrc.org/~pietro/inteins.


Eucarya
Intein Name Intein Size Endo Activity Endo Motif Location in Extein N-terminal Splice Junction C-terminal Splice Junction Insert Site
APMV Pol351DODD1052FPGSEVIYGD/SKN/TDSIFINFHIpol-c, Pol Motif C
Abr PRP8165NoneA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a, same as A1578 in Sce PRP8
Aca PRP8535DODA?------WEKA/CHN/S---------PRP8-a, same as A1578 in Sce PRP
Afu-Af293 PRP8819DODA1522SWEGLFWERA/CHN/SGFEESMKFKPRP8-a, same as A1578 in Sce PRP8
Afu-FRR0163 PRP8819DODA?SWEGLFWERA/CHN/SGFEESMKFKPRP8-a, same as A1578 in Sce PRP8
Ani-FGSCA4 PRP8605DODA1511SWEGLFWEKA/CHN/SGFEESMKFKPRP8-a
Avi PRP8169NoneA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a, same as A1578 in Sce PRP8
Bci PRP8838DODA?SWEGLFWEKA/CHN/SGFEE-----PRP8-a,same as A1578 in Sce PRP8
Bde-JEL197 RPB2488DODV120?QLHNTHWGMV/CHN/CPAETPEGQARPB2-c, domain 3, V522 in Sce RPB2
Bde-JEL423 PRP8-1465DODR781ILQHLSEAWR/CHN/CWKANIPWKVPRP8-b
Bde-JEL423 PRP8-2465DODA2034TWEGLFWEKA/CHN/SGFEESMKFKPRP8-a,same as A1578 in Sce PRP8
Bde-JEL423 RPC2488DODI526SLQTSQWGMI/CHN/CPSDTPEGEARPB2-c, RPC2-b
Bde-JEL423 eIF-5B419DODK?CILGHVDTGK/CHN/TKLLDKIRQTIF2-a, eIF-5B-a, same as K418 in Sce eIF-5B (P39730)
CIV RIR1339DODL271KGLTIKQSNL/CGQ/CSEIILPTDSRIR1-i
CV-NY2A ORF212392391DODK438LAFHSVGSGK/CHN/TVSALGIALAORF212392-a, ATP/GTP-binding site motif A (P-loop)
CV-NY2A RIR1336DODL436NAGTIRGSNL/CGQ/CNEIVEYTSKRIR1-i
CZIV RIR1139NoneL161LGLNIKQSNL/CGQ/CSEIILPTDERIR1-i
Cba-WM02.98 PRP8170NoneA?TWEGLFWEKA/CHN/SGFEESMKNKPRP8-a, same as A1578 in Sce PRP8
Cba-WM728 PRP8170NoneA?TWEGLFWEKA/CHN/SGFEESMKNKPRP8-a, same as A1578 in Sce PRP8
Ceu ClpP456DODE447GCHVMIHQPE/CGN/SSIQCQASDIclpP-a, Endopeptidase active site
Cga PRP8170NoneA?TWEGLFWEKA/CHN/SGFEESMKNKPRP8-a, same as A1578 in Sce PRP8
Cgl VMA415DODG276SNSDTIIYVG/CHN/CGERGNEMAEVMA-a
Cla PRP8522DODS59?TWEGLFWEKS/CHN/SGFEESMKFKPRP8-a,same as A1578 in Sce PRP8
Cne-A PRP8 (Fne-A PRP8)171NoneA?TWEGLFWEKA/CHN/SGFEE-----PRP8-a, same as A1578 in Sce PRP8
Cne-AD PRP8 (Fne-AD PRP8)172NoneA?TWEGLFWEKA/CHN/SGFEESMKNKPRP8-a, same as A1578 in Sce PRP8
Cne-JEC21 PRP8172NoneA1530TWEGLFWEKA/CHN/SGFEESMKNKPRP8-a, same as A1578 in Sce PRP8
Cpa ThrRS182NoneN399KETFGLKPMN/CGN/CPGHCILFKSthrRS-a
Cre RPB2431DODD1085GLRFGEMERD/CGN/CIISHGAAAFRPB2-a, D1136 in Sce RPB2 CAA99357
Cst RPB2362DODH692?LKHMVDDKIH/CGN/SRSRGPLQILRPB2-b, domain 6, H1104 in Sce RPB2
Ctr ThrRS345N399KETFGLKPMN/CGN/CPGHAVMFKSthrRS-a
Ctr VMA471DODG283SNSDVIIYVG/CHN/CGERGNEMAEVMA-a
Ddi RPC2464A505CPSDTPEGEA/CHN/CGLVKNFALMRPC2-a
Dhan GLT1607DODR1183IALGCIMMRR/CAN/CHLNTCPVGIGLT1-a
Dhan VMA394DODG271SNSDLMVYIG/CHN/CGERGNEMAEVMA-a
Eni PRP8605DODA?-WEGLFWEKA/CHN/SGFE------PRP8-a, same as A1578 in Sce PRP8
Eni-FGSCA4 PRP8605DODA1525SWEGLFWEKA/CHN/SGFEESMKFKPRP8-a
Gth DnaB160NoneG376PILSDLKESG/CHN/SIEQDADVVLdnaB-a
HaV01 Pol232D646YPDAKVIYGD/SKN/TDSVYVNFPSpol-c, Pol Motif C
Hca PRP8534DODA?TWEGLFWEKA/CHN/SGFEESMKNKPRP8-a, same as A1578 in Sce PRP
IIV6 RIR1339DODL271KGLTIKQSNL/CGQ/CSEIILPTDSRIR1-i
Kex-CBS379 VMA502DODG18?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Kla-CBS683 VMA410DODG18?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Kla-IFO1267 VMA410DODG276SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Kla-NRRLY1140 VMA410DODG283SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Lel VMA421DODG279SNSDVIIYVG/CHN/CGERGNEMAEVMA-a
Nau PRP8164NoneA?SWEGLFWERA/CHN/SGFEESMKFKPRP8-a, same as A1578 in Sce PRP8
Nfi PRP8517DODA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a,same as A1578 in Sce PRP8
Ngl-FR2163 PRP8155NoneA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a, same as A1578 in Sce PRP8
Ngl-FRR1833 PRP8169NoneA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a, same as A1578 in Sce PRP8
Nqu PRP8169NoneA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a, same as A1578 in Sce PRP8
Nspi PRP8169NoneA?SWEGLFWERA/CHN/SGFEESMK--PRP8-a, same as A1578 in Sce PRP8
Pan CHS2649DODT562IAKNYVNQKT/CHN/CTAHVYEYTTCHS2-a
Pan GLT1682DODK1194IAMGCIMMRK/CHN/CHLNTCPVGIGLT1-a
Pbl PRP8-a198NoneA1513SWLGLFWEKA/CHN/SGFEESMKYKPRP8-a,same as A1578 in Sce PRP8
Pbl PRP8-b198NoneA1512SWLGLFWEKA/CHN/SGFEESMKYKPRP8-a,same as A1578 in Sce PRP8
Pbr PRP8573DODA?SWEGLFWERA/CHN/SGFEESMKFKPRP8-a, same as A1578 in Sce PRP8
Pch PRP8157NoneA?------WEKA/CHN/SGFE------PRP8-a, same as A1578 in Sce PRP8
Pex PRP8162NoneA?------WEKA/CHN/SGFE------PRP8-a, same as A1578 in Sce PRP8
Pgu GLT1553DODK1186IAMGCIMMRK/CAN/CHLNTCPVGIGLT1-a
Pgu-alt GLT1553DODK?IAMGCIMMRK/CSN/CHLNTCPVGIGLT1-a, R1183 of Dha GluSyn
Pno GLT1635DODK?IAMGCIMMRK/CSN/CHLNTCPVGIGLT1-a, R1183 of Dha GluSyn
Pno RPA2456Q?FNQSPRNMYQ/CGN/CQMGKQSMGTRPA-a, Q691 of C. albicans XP_720354
Ppu DnaB150NoneG361PLLSDLRESG/CHN/SIEQDADLVIdnaB-a
Pst VMA449DODG282SNSDVIIYVG/CHN/CGERGNEMAEVMA-a
Ptr PRP8844DODA1565SWEGLFWEKA/CHN/SGFEESMKFKPRP8-a,same as A1578 in Sce PRP8
Pvu PRP8161NoneA?------WEKA/CHN/SGFE------PRP8-a, same as A1578 in Sce PRP8
Pye DnaB148NoneG361PLLSDLRESG/CHN/SIEQDADLVIdnaB-a
Sas RPB2354DODH697?LKHMVDDKIH/CGN/SRARGPV---RPB2-b, domain 6, H1104 in Sce RPB2
Sca-CBS4309 VMA517DODG18?SNSDSIIYVG/CHN/CGERGNEMAEVMA-a
Sca-IFO1992 VMA517DODG265SNSDSIIYVG/CHN/CGERGNEMAEVMA-a
Scar VMA454DODG18?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Sce VMA454PI-SceIDODG283SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Sce-DH1-1A VMA454DODG28?SNSDAIIYVGlCHN/CGERGNEMAEVMA-a
Sce-OUT7091 VMA454DODG258SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Sce-OUT7112 VMA454DODG258SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Sda VMA501DODG18?SNSDTIIYVG/CHN/CGERGNEMAEVMA-a
Sex-IFO1128 VMA499DODG267?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
She RPB2 (RpoB)390DODH578LVHLVDEKIH/CGN/SRSSGPYSLIRPB2-b
Sja VMA476DODG284SNSDLIVYVG/CHN/CGERGNEMAEVMA-a
Spa VMA454DODG269SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Spu PRP8473DODH?KGMLDPLEVH/CHN/CLDFPNIVIKPRP8-c, same as H1947 in Sce PRP8
Sun VMA414DODG18?SNSDTIIYVG/CHN/CGERGNEMAEVMA-a
Tgl VMA456DODG18?SNSDVIIYVG/CHN/CGERGNEMAEVMA-a
Tpr VMA455DODG18?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Ure PRP8180NoneA?SWEGLFWERA/CHN/SGFEE-----PRP8-a,same as A1578 in Sce PRP8
Vpo VMA433DODG18?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
WIV RIR1138NoneL173LGLRVKQSNL/CSN/CSEIILPTDERIR1-i
Zba VMA456DODG18?SNSDAIIYVG/CHN/CGERGNEMAEVMA-a
Zbi VMA450DODG18?SNSDAIVYVG/CHN/CGERGNEMAEVMA-a
Zro VMA450DODG18?SNSDAIVYVG/CHN/CGERGNEMAEVMA-a
Eubacteria
Intein Name Intein Size Endo Activity Endo Motif Location in Extein N-terminal Splice Junction C-terminal Splice Junction Insert Site
AP-APSE1 dpol306NoneS608ERLKTYGGKS/CHN/CENICQAAARdpol-a
Aae RIR2346DODL229QIKYINRDEL/CGN/CHVTLFRNIIRIR2-a, Metal binding site
Aave Hyp-1721333DODF2211ARGAVGGALF/CHN/TFKTYSVSYLAave_1721-a
Aave RIR388DODP301YCESIAATNP/CHN/CGEQPLPSYGRIR1-b
Ace RIR1153NoneA156GTPAKQQVSA/CHN/CFILSVDDTMRIR1-j
Aeh DnaB-1501DODK226IVAGRPSMGK/CHN/TTWAMNIVEHdnaB-b, ATP/GTP-binding site motif A (P-loop)
Aeh DnaB-2418DODE892KRPVMSDLRE/CHN/SGAIEQDADVdnaB-c
Aeh RIR1377DODP325FCEDIRATNP/CHN/CGEQPLPPYGRIR1-b
Aha DnaE-c36NoneNoneFDQMIKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Aha DnaE-n110NoneY602FDQMIKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Aov DnaE-c36NoneNoneFQQMLNFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Aov DnaE-n101NoneY402FQQMLNFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Arsp-FB24 DnaB332DODE?GLVTTATASE/GHN/TRQLPPLPAQdnaB-h
Asp DnaE-c36NoneNoneFDDMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Asp DnaE-n102NoneY775FDDMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ava DnaE-c36NoneNoneFEDMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ava DnaE-n103NoneY775FEDMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Avin RIR1 BIL378DODQ442VNDTAVAVNQ/CHN/GGKRKGAVCARIR1-h
Bce DnaB347DODK226IVAGRPSMGK/AHN/TAFSMNIGEYdnaB-b, ATP/GTP-binding site motif A (P-loop)
BsuP-M1918 RIR1385DODL30?HISKVKFSNL/CGN/CSEVLQSSQVRIR1-i
BsuP-SPBc2 RIR1385DODL380HISKVKFSNL/CGN/CSEVLQSSQVRIR1-i
Cag RIR1370DODP453QSGRINASNP/CHN/CSEYMFLDDTRIR1-b
Cau SpoVR276*DODA280MTKILNEGWA/CHN/SYWHSTIMTQChlo1563-a
CbP-C-St RNR330DODC333ATSIDALASC/CHN/CRLTSSSKEIRNR-c
CbP-D RNR330DODC333ATSIDALASC/CHN/CRLTSSSKEIRNR-c
Cbu DnaB146NoneE389KRPVMSDLRE/CHN/SGIEQDADLIdnaB-c
Cch RIR1370DODP453QSGRINASNP/CHN/CSEYMFLDDTRIR1-b
Chy RIR1345DODP239ELGEIESTNP/CLD/CGEQPLLPYERIR1-b
Ckl PTerm402DODK146LIFVGRKNGK/AHN/TTLISGISNYPTerm-a
Cth ATPase BIL135NoneK310FSAGAASTMK/CHN/VKYNDGSNKICth_ATPase-a
Cth TerA333DODK67YVEIPKKNGK/QHN/SELAAAVALYterA-a
Cwa DnaB496DODK213IIAGRPSMGK/CHN/TAFGLGVAANdnaB-b, ATP/GTP-binding site motif A (P-loop)
Cwa DnaE-c36NoneNoneFEQMIKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Cwa DnaE-n106NoneY774FEQMIKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Cwa PEP394DODT453AIVTNQGGRT/CCN/CHAAIIAREMPEPsyn-a
Cwa RIR1347DODL462HVGYIPGVNL/CGQ/CTESFSNVTPRIR1-i
Dge DnaB401DODK215VLAARPSMGK/CHN/TAFALSIAQNdnaB-b, ATP/GTP-binding site motif A (P-loop)
Dha-DCB2 RIR1366DODP241QLGEIEATNP/CHN/CGEQPLLPNERIR1-b
Dha-Y51 RIR1366DODP283QLGEIEATNP/CHN/CGEQPLLPNERIR1-b
Dra RIR1366DODP464ERYEIRSTNP/CHN/CGEIPLTVGERIR1-b
Dra Snf2-c343DODNoneILADDMGLGK/AHN/TLQTLAHLLKsnf2-a, ATP/GTP-binding site motif A (P-loop)
Dra Snf2-n343DODK693ILADDMGLGK/AHN/TLQTLAHLLKsnf2-a, ATP/GTP-binding site motif A (P-loop)
Dra-ATCC13939 Snf2343DODK693ILADDMGLGK/AHN/TLQT------snf2-a, ATP/GTP-binding site motif A (P-loop)
Dvul ParB288P286GHYHWMHEP/CHN/CWYAVKGQAHParB-a
Fal DnaB408DODK256IVAARPAVGK/AHN/STLGLDFARAdnaB-b, ATP/GTP-binding site motif A (P-loop)
Fsp-CcI3 RIR1294NoneA154GTPAPQQVSA/CHN/CFILSVDDTMRIR1-j
Gob DnaE446DODK306VKFGGYGFNK/CHN/SHTAAYAQIGdnaE-c
Gob Hyp287P286RQDYHWKHEP/CHN/CLYGWIDGAAGob_hyp-a
Gvi DnaB258NoneK221IVAGRPGMGK/CHN/TAFSLSIAQRdnaB-b, ATP/GTP-binding site motif A (P-loop)
Gvi RIR1-1413DODK193TSKKITTGNK/CSN/SRRGAFMFSMRIR1-e
Gvi RIR1-2367DODP755IKNFITTTNP/CHN/CGEIWLPPNSRIR1-b
Hhal DnaB-1492DODK225IVAGRPSMGK/CHN/TTVAMNMVEHdnaB-b, ATP/GTP-binding site motif A (P-loop)
Hhal DnaB-2145NONEE883NKRPIMSDLRE/CHN/SGAIEQDADLdnaB-c
Kra DnaB428DODG416PMVSDLRESG/CHN/SIEQDADMVIdnaB-a
LP-phiHSIC Helicase339DODG34DPCVVDAATG/CHN/CGKSVIIAEIhelicase-c
MP-Aaphi23 MupF325N256EVGNPGHDFN/CSN/CRCVAIPVFDmupF-a
MP-Be DnaB341DODQ140VTIAAVSQDQ/PHN/TKNTFSLFPIdnaB-d
MP-Be gp51317D94WIGAHEGNHD/CGN/SRARDYLSKNMP-U2_gp51-a
MP-Catera gp206331DODK149NGQVIPVELK/SHN/TQNSRSFDFQMP-Catera_gp206-a
MP-Mcjw1 DnaB331DODK92WIELARKNGK/AHN/TELLAGIMLYdnaB-f, ATP/GTP-binding site motif A (P-loop)
MP-Omega DnaB340DODK106LIIHSAHEFK/AHN/TAVNGMERLEdnaB-e
MP-U2 gp50317D94WIGAHEGNHD/CGN/SRARDYLSKNMP-U2_gp51-a
Mav DnaB337DODK232IVAARPGVGK/AHN/STLGLDFLRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mav-104 DnaB337DODK232IVAARPGVGK/AHN/STLGLDFLRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mav-PT DnaB417DODK232IVAARPGVGK/AHN/STLGLDFLRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mbo Pps1359DODG252EGSYVHYVEG/CHN/CTAPIYKSDSSufB-b
Mbo RecA440DODK251RTRVKVVKNK/CHN/CSPPFKQAEFrecA-a
Mbo SufB (Mbo Pps1)359DODG252EGSYVHYVEG/CHN/CTAPIYKSDSSufB-b
Mbo-1173P DnaB416DODG399PMLADLRESG/CHN/SLEQDADVVIdnaB-a
Mbo-AF2122 DnaB416DODG399PMLADLRESG/CHN/SLEQDADVVIdnaB-a
Mca MupF314unknownN183NTIWPPNGFN/CHN/CRCRVRPRSEmupF-a
Mca RIR1380DODP282YCERIEATNP/CHN/CAEQPLPAYGRIR1-b
Mch RecA364DODG?-REKIGVMFG/CHN/SPETTTGGKArecA-b
Mex Helicase270E119PPFDIVVVDE/CHN/CHRWFEMLGQhelicase-b
Mex TrbC365K51IVLGTTGAGK/AHN/TETLLGFAANtrbC-a, ATP/GTP-binding site motif A (P-loop)
Mfa RecA363DODG?-REKIGVMFG/CHN/SPETTTGGKArecA-b
Mfl GyrA421DODY?GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mfl RecA364DODG205LREKIGVMFG/CHN/SPETTTGGKArecA-b
Mfl-ATCC14474 RecA364DODG?-REKIGVMFG/CHN/SPETTTGGKArecA-b
Mfl-PYR-GCK DnaB417DODK235VVAARPGMGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mga GyrA420DODY?GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mga RecA368DODG?-RDKIGVMFG/CHN/SPETTTGGKArecA-b, same as G205 in Mga ATCC 15754 RecA
Mga SufB (Mga Pps1)378PI-MgaIDODE ?LVAGVAAQYE/CNN/SEVVY-----SufB-c
Mgi-PYR-GCK DnaB417DODK235VVAARPGMGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mgi-PYR-GCK GyrA421DODY130GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mgo GyrA420DODY?GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Min DnaB335DODK233IVAARPGVGK/AHN/STLGLDFLRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mkas GyrA420DODY?GNVPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mle DnaB145NoneK233IVAARPGVGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mle GyrA420DODY130GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mle RecA365DODG205LREKIGVMFG/CHN/SPETTTGGKArecA-b, Disordered loop 2 that interacts with DNA
Mle SufB (Mle Pps1)386DODG201ALNTAVWSGG/CHN/SFIYVPPGVHSufB-a
Mma GyrA420DODY?GNNPPAAMRY/CHN/TEAR------gyrA-a, After active site Tyr
Mmag Magn8951 BIL141NoneS171QQSTPAPSVS/CHN/YGDGPTREQFMagn8951-a
Msh RecA364DODG?-REKIGVMFG/CHN/SPETTTGGKArecA-b
Msm DnaB-1139NoneK237IIAARPGVGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Msm DnaB-2425DODG543PQVSDLRESG/CHN/SLEQDADMVMdnaB-a
Msp-KMS DnaB322DODK233VIAARPGMGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Msp-KMS GyrA421DODY130GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Msp-MCS DnaB322DODK233VIAARPGMGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Msp-MCS GyrA421DODY130GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mthe RecA365DODG?-REKIGVMFG/CHN/SPETTTGGKArecA-b
Mtu SufB (Mtu Pps1)359DODG252EGSYVHYVEG/CHN/CTAPIYKSDSSufB-b
Mtu-CDC1551 DnaB416DODG399PMLADLRESG/CHN/SLEQDADVVIdnaB-a
Mtu-F11 DnaB416DODG399PMLADLRESG/CHN/SLEQDADVVIdnaB-a
Mtu-H37Ra DnaB416DODG399PMLADLRESG/CHN/SLEQDADVVIdnaB-a
Mtu-H37Rv DnaB416DODG399PMLADLRESG/CHN/SLEQDADVVIdnaB-a
Mtu-H37Rv RecA440DODK251RTRVKVVKNK/CHN/CSPPFKQAEFrecA-a
Mtu-So93 RecA440DODK251RTRVKVVKNK/CHN/CSPPFKQAEFrecA-a
Mvan DnaB416DODK221VVAARPGMGK/AHN/STLGLDFMRSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Mvan GyrA421DODY130GNDPPAAMRY/CHN/TEARLTPLAMgyrA-a, After active site Tyr
Mxa RAD25436DODK175TAVLPCGGGK/CHN/TMLALGAVARrad25-a,ATP/GTP-binding site motif A (P-loop)
Mxe GyrA198NoneY?GNDPPAAMRY/CHN/TEAPLTPLAMgyrA-a, After active site Tyr
Nfa DnaB425DODG400PMVSDLRESG/CHN/SLEQDADMVIdnaB-a
Nfa Nfa15250313N197WSRGFRRHPN/CSN/CNCRHIPSRENfa15250-a
Nfa RIR1409DODS156GKKQRGEPVS/CHN/CFLLRIEDNMRIR1-j
Npu DnaB429DODG388PMLSDLRESG/CHN/SIEQDADLVIdnaB-a
Npu DnaE-c36NoneNoneFEQMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Npu DnaE-n102NoneY774FEQMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Npu GyrB322HNHG77IPAAVGVDIG/CHN/CGMSAIKTSFgyrB-b
Nsp-JS614 DnaB352DODK246IVAARPAMGK/AHN/STLALDLCRAdnaB-b, ATP/GTP-binding site motif A (P-loop)
Nsp-JS614 TOPRIM312DODH61NVNPSRGFFH/CGN/CFGCSEGGNVTOPRIM-a
Nsp-PCC7120 DnaB429DODG388PMLSDLRESG/CHN/SIEQDADLVIdnaB-a
Nsp-PCC7120 DnaE-c36NoneNoneFDDMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Nsp-PCC7120 DnaE-n102NoneY775FDDMLKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Nsp-PCC7120 RIR1407DODR275VTIVAGNIRR/CHN/SAGMRQFISDRIR1-d
Oli DnaE-c36NoneNoneFEQMVKFAEY/CSN/CFNKSHSMAYdnaE-a, Beta and tau binding domains
Oli DnaE-n112NoneY25?FEQMVKFAEY/CSN/CFNKSHSMAYdnaE-a, Beta and tau binding domains
PP-PhiEL Helicase262K151LLDAKPGSGK/AHN/TFTSLAWSQLdnaB-b, ATP/GTP-binding site motif A (P-loop)
PP-PhiEL ORF11313K181YMIMPRQQGK/QHN/TVSVQVIDFWPP-PhiEL_ORF11-a
PP-PhiEL ORF39366DODK246MLGERNAAGK/AHN/SLTNNGKALKPP-PhiEL_ORF39-a
PP-PhiEL ORF40248K144VNNASTGFGK/MHN/TYMAIHSMVKPP-PhiEL_ORF40-a
Pfl Fha BIL148NoneC2585EAKLAGYKPC/CHN/VGPCYSCSNGfha-a
Plut RIR1370DODP453AAGRINASNP/CNC/SEYMFLDNTARIR1-b
Pna RIR1374DODP297YCEAIAATNP/CGQ/CGEQPLPPYGRIR1-b
Pnuc DnaB352DODK238VAGRPSMGK/AHN/TAFALNIAENdnaB-b, ATP/GTP-binding site motif A (P-loop)
Posp-JS666 DnaB351DODK234ILAARPSMGK/AHN/TALAINIAEHdnaB-b,ATP/GTP-binding site motif A (P-loop)
Posp-JS666 RIR1380DODP297YCESIEATNP/CHN/CGEQPLPPYGRIR1-b
Pssp-A1-1 Fha148NoneR?EGAKVPPCPR/CHN/TGGPCDIPVGfha-a
Psy Fha148NoneC5986GRKFAMDGPC/CHN/TGPCELPEGYfha-a
Rma DnaB428DODG420PQLSDLRESG/CHN/SIEQDADVVLdnaB-a
Rsp RIR1372DODP265YCETIAATNP/CHN/CGEQPLPPYGRIR1-b
SaP-SETP12 dpol299A447RKDLRQIGKA/CHN/CELGLGYEGGdpol-b
SaP-SETP3 Helicase348DODK33NIWASMGSGK/CHN/TSSTLWVLNRhelicase-d
SaP-SETP3 dpol299A447RKDLRQIGKA/CHN/CELGLGYEGGdpol-b
SaP-SETP5 dpol299A447RKDLRQIGKA/CHN/CELGLGYEGGdpol-b
Sav Helicase338DODK310LLQGEVGSGK/AHN/TMVALRAMLAsnf2-a, ATP/GTP-binding site motif A (P-loop)
Sel-PC6301 RIR1370DODP409HRLQRYGLNP/CHN/CGEILGADFHRIR1-b
Sel-PC7942 DnaE-c36NoneNoneFDQMVLFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Sel-PC7942 DnaE-n113NoneY757FDQMVLFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Sel-PC7942 RIR1370DODP409HRLQRYGLNP/CHN/CGEILGADFHRIR1-b
Sel-PCC6301 DnaE-c36NoneNoneFDQMVLFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Sel-PCC6301 DnaE-n113NoneY757FDQMVLFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Sep RIR1384HNHL377ELGEIKMSNL/CGN/CTEIFQYMHVRIR1-i
ShP-Sfv-2a-2457T-n PrimaseDODK371LVNGVNGHGK/A?primase-a, ATP/GTP-binding site motif A (P-loop)
ShP-Sfv-2a-301-n PrimaseDODK371LVNGVNGHGK/A?primase-a, ATP/GTP-binding site motif A (P-loop)
ShP-Sfv-5 Primase342DODK371LVNGVNGHGK/AHN/TEVVGHMALEprimase-a, ATP/GTP-binding site motif A (P-loop)
Spl DnaX136NoneE129CRYKVYVIDE/CHN/CHMLSTAAFNhelicase-b, putative helicase DEAD-box motif
Sru DnaB344DODK230IIAARPSMGK/CHN/TAFALASAQNdnaB-b,ATP/GTP-binding site motif A (P-loop)
Sru PolBc358N498RQSSYKVLIN/CGQ/SFYGLLGFGLpol-b, Pol Motif B
Sru RIR1372DODL260KGYDVHASNL/CFN/CSEIALPSGPRIR1-i
Ssp DnaB429DODG380PMMSDLRESG/CHN/SIEQDADLIMdnaB-a
Ssp DnaE-c36NoneNoneFDQMVKFAEY/CAN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ssp DnaE-n123NoneY774FDQMVKFAEY/CAN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ssp DnaX430*DODE129CRYKVYVIDE/CHN/CHMLSTAAFNhelicase-b, putative helicase DEAD-box motif
Ssp GyrB435HNHG436FIVEGDSAGG/CHN/SAKQGRDRRFgyrB-a, Signature for DNA topoisomerase II
Ssp-JA2 DnaB141NoneG388PQLADLRESG/CHN/SIEQDADLVMdnaB-a
Ssp-JA2 RIR1369DODP410DRLWRYGLNP/CHN/CGEIIGHTFHRIR1-b
Ssp-JA3 DnaB141NoneG388PQLADLRESG/CHN/SIEQDADVVMdnaB-a
Ssp-JA3 RIR1369DODP423HRVQRYGLNP/CHN/CGEIIGCDFHRIR1-b
StP-Twort ORF6420K147VLKIATNGGK/CHN/TECASGIIDQSP-Twort_ORF6-a
Susp-NBC371 DnaB intein344DODK205IIAARPAMGK/CHN/TALVLNMALRdnaB-b,ATP/GTP-binding site motif A (P-loop)
Tel DnaE-c35NoneNoneFKQMLDFAEY/CAN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Tel DnaE-n118NoneY755FKQMLDFAEY/CAN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ter DnaB-11986DODK212IVAGRPSMGK/CHN/TSFAVNIAHSdnaB-b, ATP/GTP-binding site motif A (P-loop)
Ter DnaB-2177NoneG2366PMMSDLRESG/CHN/SIEQDADLVIdnaB-a
Ter DnaE-11365NoneL719PILKETYGVL/CHN/CYQEQIMKMAdnaE-d
Ter DnaE-2428DODR2110SLGEADLLRR/CHN/CMGKKKVSEMdnaE-b
Ter DnaE-3c36NoneL719FEQMIKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ter DnaE-3n102NoneY2582FEQMIKFAEY/CSN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Ter GyrB244HNHG439YLVEGDSASG/CHN/SAKQGRDRRFgyrB-a, Signature for DNA topoisomerase II
Ter Ndse-1336DODS141GNVNCIGIRS/CGQ/CYDEGKRVAEndse-a
Ter Ndse-2430N508VDIRVARIFN/SHN/TYGPRMLENDndse-b
Ter RIR1-1394DODR275VTIVAGNIRR/CSN/SAGIRQGSNSRIR1-d
Ter RIR1-2373DODP699HRLARLGLNP/CHN/CGEIIGSNFHRIR1-b
Ter RIR1-3323DODH982CGEIIGSNFH/CGN/CNLSEIHLNQRIR1-f
Ter RIR1-4381DODG1535NRCTTVQPSG/CHN/TKSLLTNASPRIR1-g
Ter Snf2469DODK610CLADDMGLGK/CHN/TIQTIAFLLKsnf2-a, ATP/GTP-binding site motif A (P-loop)
Ter ThyX298C11QQARTHRIGC/CHN/SFDVQSYRFCthyX-a
Tfus Hyp-2914341Y71PARGWADIGY/CGN/SFGACPHGYVTfus_2914-a
Tfus RecA-1422DODK95EIYGPESSGK/CHN/TTVALHAVANrecA-c, ATP/GTP-binding site motif A (P-loop)
Tfus RecA-2357DODG649LREKVGVMFG/CHN/SPETTSGGRArecA-b
Tth-HB27 DnaE-1423DODR767SLGEADLLRR/CHN/SMGKKKVEEMdnaE-b
Tth-HB27 DnaE-2423DODK1238EAFANYGFNK/CHN/SHAAAYSLLSdnaE-c
Tth-HB27 RIR1-1438DODG298PVLRVVRQGG/CHN/TRRGAGMATLRIR1-e
Tth-HB27 RIR1-2407DODP885ERYQIRSTNP/CHN/CGEIPLTVGERIR1-b
Tth-HB8 DnaE-1423DODR767SLGEADLLRR/CHN/SMGKKKVEEMdnaE-b
Tth-HB8 DnaE-2423DODK1238EAFANYGFNK/CHN/SHAAAYSLLSdnaE-c
Tth-HB8 RIR1-1438DODG301PVLRVVRQGG/CNH/TRRGAGMATLRIR1-e
Tth-HB8 RIR1-2407DODP887ERYQIRSTNP/CHN/CGEIPLTVGERIR1-b
Tvu DnaE-c35NoneNone-----DFAEY/CAN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Tvu DnaE-n117NoneY5?-----DFAEY/CAN/CFNKSHSTAYdnaE-a, Beta and tau binding domains
Archaea
Intein Name Intein Size Endo Activity Endo Motif Location in Extein N-terminal Splice Junction C-terminal Splice Junction Insert Site
Ape APE0745468Q175LVSQYAITTQ/SHN/SAFGWGLEHVAPE0745-a
Fac-Fer1 RIR1366DODP437NIGYIESTNP/CHN/CGEQPLLPYERIR1-b
Fac-Fer1 SufB (Fac Pps1)356DODG245EGAKVHYIEG/CHN/CTAPKYNTSSSufB-b
Fac-TypeI RIR1366DODP437NIGYIESTNP/CHN/CGEQPLLPYERIR1-b
Fac-typeI SufB (Fac Pps1)356DODG242EGAKVHYIEG/CHN/CTAPKYNTSSSufB-b
Hma CDC21477DODK331LLIGDPGTGK/CHN/SQMLSYIENICDC21-a, ATP/GTP-binding site motif A (P-loop)
Hma Pol-II180NoneN965PYFHAAKRRN/CGQ/CDGDEDCVMLpol_II-a
Hma PolB409N630QQAAVKVIMN/CGQ/SLYGVLGWDRpol-b, Pol Motif B
Hma TopA537DODK492TMEDKGLGTK/CHN/STRHNSIEKLtop-b
Hsa-NRC1 CDC21182NoneK282LLIGDPGTGK/CHN/SQMISYVQNICDC21-a, ATP/GTP-binding site motif A (P-loop)
Hsa-NRC1 Pol-II195NoneN925PYFHAAKRRN/CGQ/CDGDEDCVMLpol_II-a
Hvo PolB437DODD655QIGYDVAYGD/SHN/TDSVMLELGPpol-c, Pol Motif C
Hwa GyrB215G433FIVEGDSAGG/CHN/SAKQGRERRFgyrB-a, Signature for DNA topoisomerase II
Hwa MCM-1209NoneK335LLIGDPGTGK/CHN/SAMLQYIRNICDC21-a, ATP/GTP-binding site motif A (P-loop)
Hwa MCM-2521L571SGKGSSSAGL/CHN/TAAAVRDDFGCDC21-b
Hwa MCM-3211NoneR1131AAVDELDKMR/CHN/SEDRSAMHEACDC21-d
Hwa MCM-4572Q1356SAMHEALEQQ/SHN/SISVSKAGINCDC21-c
Hwa Pol-II-1529DOD?N966PYFHAAKRRN/CKQ/CDGDEDCVMLpol_II-a
Hwa Pol-II-2544DODG1524REYLPDKRGG/SHN/SMDAPLVMSSpol_II-b
Hwa PolB-1434DODN318TDPDILTGWN/CHN/CDDFDVPYFLpol-d
Hwa PolB-2358N1030QQTAVKVIMN/CGN/SLYGVLGWDRpol-b, Pol Motif B
Hwa PolB-3431DODD1437DLDKSVIYGD/SHN/TDSVMLELGDpol-c, Pol Motif C
Hwa RCF323K61LFAGPAGVGK/CHN/TTAATAIAHARFC-a, ATP/GTP-binding site motif A (P-loop)
Hwa RIR1-1408DODQ201TAKEAAEVFQ/CHN/SGGGMGYAFWRIR1-k
Hwa RIR1-2438DODG1036HNTTTIAPTG/CHN/TTSMIGNTTGRIR1-g
Hwa Top6B492Q116YGSRFHAREQ/SKN/SRGQQGIGISTop6B-a
Hwa rPol A''214NoneM87QSIGEPGTQM/SHN/TMNTFHYAGVrPol A''-a
Maeo-N3 Helicase524DODL372IKVICCTPTL/CHN/SAGLNLPCRRhelicase-a, Motif V of DEAD and DEAH box helicases
Maeo-N3 RtcB485DODN95SPGGVGFDINCHN/CGVRLVKTNLrtcB-a
Maeo-N3 UDP GP463DODS260LNAGIGYGGS/CHN/CFPKDVRALIUDP_GD-a
Memar MCM2358DODQ414SALHEAMEQQ/CGN/SISVAKAGITCDC21-c
Memar Pol-II165NoneN870PFFHAAKRRN/CGQ/CDGDEDCVMLpol_II-a
Mhu Pol-II165NoneN872PFFHAAKRRN/CGQ/CDGDEDCVMLpol_II-a
Mja GF-6P499DODH74DIDGNIGIGH/CHN/SRWATHGNVCGF6P-a
Mja Helicase501DODL337IKVICCTPTL/CHN/SAGLNLPCRRhelicase-a, Motif V of DEAD and DEAH box helicases
Mja Hyp-1392DODH128DVGGLIGPAH/CHN/CFTPWTSLYKMja hyp1-a
Mja IF2546DODK30CVLGHVDHGK/CHN/TTLLDKIRKTIF2-a, ATP/GTP-binding site motif A (P-loop)
Mja KlbA168NoneG404LVAMNTGHDG/ASN/CSGTLHANSAkblA-a
Mja PEP412DODT410AIVTDEGGLT/CFN/CHAAIVSRELPEPsyn-a, Prosite signature PS00370
Mja Pol-1369DODR425FEDIISMDFR/CHN/SLYPSIIISYpol-a, Pol Motif A
Mja Pol-2476DODN882EQKSLKILAN/SHN/SVYGYLAFPRpol-b, Pol Motif B
Mja RFC-1548DODK53LFSGPPGVGK/CHN/TTAALCLARDRFC-a, ATP/GTP-binding site motif A (P-loop)
Mja RFC-2436DODA626WRDNFLELNA/SHN/SDERGIDVIRRFC-b
Mja RFC-3543DODS1124YSDVCRFILS/CHN/CNYPSKIIPPRFC-c
Mja RNR-1453DODQ337NQMYVARGGQ/SHN/TIFSSINLELRNR-a
Mja RNR-2533DODS1058WTVTQTPAES/SHN/TAGRFARLDYRNR-b
Mja RtcB (Mja Hyp-2)488DODN97SPGGVGFDIN/CHN/CGVRLIRTNLrtcB-a
Mja TFIIB335DODY99RCRVGAPMTY/SHN/TIHDKGLSTVTFIIB-a
Mja UDP GD454DODS260LNAGIGYGGS/CHN/CFPKDVKALIUDP_GD-a, Active site
Mja r-Gyr494DODL866IAQELFELGL/CHN/CTYHRTSSTRtop-a, Putative active site Tyr
Mja rPol A'452DODV463YRTFRHNLCV/CGN/CPPYNADFDGrPol A'-a
Mja rPol A''471DODM75QSIGEPGTQM/SHN/TMRTFHYAGVrPol A''-a
Mka CDC48394DODE634PEVLSKWVGE/SHN/SEKKIREIFQCDC48-a
Mka EF2522DODK35GIIAHIDHGK/CHN/TTLSDQLLAGIF2-a, ATP/GTP-binding site motif A (P-loop)
Mka RFC305DODA82WRDNFLELNA/SHN/SDERGIDVIRRFC-b
Mka RtcB482DODN100SPGGVGYDIN/CHN/CGVRVMKTDLrtcB-a
Mka VatB517DODY260LVILTDMTNY/CSN/CEALREISAAvatB-a
Mth RIR1134NoneP265QLGRIEATNP/CHN/CGEQPLLTHERIR1-b
Neq Pol-c30NoneNoneEEGFKVIYGD/SHN/TDSLFISGDKpol-c, Pol Motif C
Neq Pol-n98NoneD579EEGFKVIYGD/SHN/TDSLFISGDKpol-c, Pol Motif C
Nph CDC21339DODK331LLIGDPGTGK/CHN/SQLLQYVKNICDC21-a, ATP/GTP-binding site motif A (P-loop)
Nph PolB-1401K518KEMVSVLDLK/CGQ/SLYPMCMVTIpol-a, Pol Motif A
Nph PolB-2409DODN1006QQSAVKVIMN/CGQ/SLYGVLGWDRpol-b, Pol Motif B
Nph rPol A''492DODM77QSIGEPGTQM/SHN/TMNTFHYAGVrPol A''-a
Pab CDC21-1164NoneK334LLVGDPGVAK/CHN/SQLLRYIANLCDC21-a, ATP/GTP-binding site motif A (P-loop)
Pab CDC21-2268L525SGKSSSAAGL/CHN/TAAVVRDEFTCDC21-b
Pab IF2394DODK20AVLGHVDHGK/CHN/TTLLDRIRKTIF2-a, ATP/GTP-binding site motif A (P-loop)
Pab KlbA196NoneG453FTAMNTGHDG/ASN/CMGTIHSNSAklbA-a
Pab Lon333DODQ220LGDVRHDPFQ/CKN/SGGLGTPAHLlon-a
Pab Moaa455DODY155TNRCNLNCWY/CSN/CFFYAREGEPMoaa-a
Pab Pol-II185NoneN954PYFHAAKRRN/CHQ/CDGDEDAVMLpol_II-a
Pab RFC-1499DODK61LFAGPPGVGK/CHN/TTAALALARERFC-a, ATP/GTP-binding site motif A (P-loop)
Pab RFC-2608DODS647FSSNVRFILS/CHN/CNYSSKIIEPRFC-c
Pab RIR1-1399DODG301VAMIQKMGGG/CHN/TGLNFSKLRPRIR1-a
Pab RIR1-2438PI-PabIDODA722DIVGTTTGAA/CSN/SGPVSFMHLIRIR1-c
Pab RIR1-3382PI-PabIIDODP1297KGGPIRATNP/CHN/CGEEPLYEYERIR1-b
Pab RtcB (Pab Hyp-2)436DODN97SPGGIGYDIN/CHN/CGVRLIRTNLrtcB-a
Pab VMA429DODK240AIPGPFGSGK/CHN/TVTQHQLAKWVMA-b, ATP/GTP-binding site motif A (P-loop)
Par RIR1392DODP439FRYVWRSVNP/CHN/CAETVQNPFERIR1-b
Pfu CDC21367L364SGKSSSAAGL/CHN/TAAAVRDEFTCDC21-b
Pfu IF2387DODK22AVLGHVDHGK/CHN/TTLLDRIRKTIF2-a, ATP/GTP-binding site motif A (P-loop)
Pfu KlbA522DODG463FTAMNTGHDG/ASN/CMGTIHANSAkblA-a
Pfu Lon401DODQ209LGDVRHDPFQ/CKN/SGGLGTPAHElon-a
Pfu RFC525DODK59LFAGPPGVGK/CHN/TTAALALARERFC-a, ATP/GTP-binding site motif A (P-loop)
Pfu RIR1-1454PI-PfuIDODG301VAMIQKMGGG/CHN/TGLNFSKLRPRIR1-a
Pfu RIR1-2382PI-PfuIIDODP914KGGPIRATNP/CHN/CGEEPLYEYERIR1-b
Pfu RtcB (Pfu Hyp-2)380DODN97SPGGIGYDIN/CHN/CGVRLIRTNLrtcB-a
Pfu TopA373DODF314IAQSLYEKGF/CHN/CSYPRTESQKtop-a, 2 aa before the catalytic Y residue
Pfu VMA425DODK240AIPGPFGSGK/CHN/TVTQHQLAKWVMA-b, ATP/GTP-binding site motif A (P-loop)
Pho CDC21-1168NoneK334LLVGDPGVAK/CHN/SQLLRYVANLCDC21-a, ATP/GTP-binding site motif A (P-loop)
Pho CDC21-2260UnknownL529SGKSSSAAGL/CHN/TAAVVRDEFTCDC21-b
Pho IF2444DODK22AVLGHVDHGK/CHN/TTLLDKIRKTIF2-a, ATP/GTP-binding site motif A (P-loop)
Pho KlbA520DODG451FTAMNTGHDG/ASN/CMGTIHSNSAkblA-a
Pho LHR475DODV346LKRGELRAVV/CKN/SSTSLELGIDLHR-a
Pho Lon474DODQ210LGDVRHDPFQ/CKN/SGGLGTPAHLlon-a
Pho Pol I460DODN492RQRAIKILAN/SHN/SYYGYYGYAKpol-b, Pol Motif B
Pho Pol-II166NoneN954PYFHAAKRRN/CHQ/CDGDEDAVMLpol_II-a
Pho RFC525DODK61LFAGPPGVGK/CHN/TTAALALSRERFC-a, ATP/GTP-binding site motif A (P-loop)
Pho RIR1385DODP467KGGPIRATNP/CHN/CGEEPLYEYERIR1-b
Pho RadA172NoneK152EVFGEFGSGK/CHN/TQLAHTLAVMrecA-c, ATP/GTP-binding site motif A (P-loop)
Pho RtcB (Pho Hyp-2)390DODN97SPGGIGYDIN/CHN/CGVRLIRTNLrtcB-a
Pho VMA376DODK240AIPGPFGSGK/CHN/TVTQHGLAKWVMA-b, ATP/GTP-binding site motif A (P-loop)
Pho r-Gyr410DODL953LAQDLFEAGL/CHN/CTYHRTDSIHtop-a, 2 aa before the catalytic Y residue
Psp-GBD Pol537PI-PspIDODN492RQRAIKILAN/SHN/SYYGYYGYAKpol-b, Pol Motif B
Pto VMA333K236AVPGPFGSGK/CHN/TVIQHQLSKWVMA-b, ATP/GTP-binding site motif A (P-loop)
Smar 1471480A377EAFVLFQAMA/SHN/TGHGGLSTIHSmar_1471-a
Smar MCM2350Q429SAIHEALEQQ/SHN/TVSIAKAGIVCDC21-c
Tac-ATCC25905 VMA173NoneK235RVPGPFGSGK/CHN/TVIQHQLAKWVMA-b, ATP/GTP-binding site motif A (P-loop)
Tac-DSM1728 VMA174NoneK235AVPGPFGSGK/CHN/TVIQHQLAKWVMA-b, ATP/GTP-binding site motif A (P-loop)
Tag Pol-1 (Tsp-TY Pol-1)360DODR409WENIAYLDFR/CHN/SLYPSIIVTHpol-a, Pol Motif A
Tag Pol-2 (Tsp-TY Pol-2)538DODN854RQRAVKLLAN/SHN/SYYGYMGYPKpol-b, Pol Motif B
Tag Pol-3 (Tsp-TY Pol-3)157NoneD1441KFGFKVLYAD/SHN/TDGFYATIPGpol-c, Pol Motif C
Tfu Pol-1360PI-TfuIDODR406WENIAYLDFR/CHN/SLYPSIIISHpol-a, Pol Motif A
Tfu Pol-2389PI-TfuIIDODD900KFGFKVLYAD/SHN/TDGFFATIPGpol-c, Pol Motif C
Thy Pol-1537DODN458RQKAIKILAN/SHN/SYYGYYGYARpol-b, Pol Motif B
Thy Pol-2389PI-ThyIDODD1044RFGFKVLYAD/SHN/TDGFFATIPGpol-c, Pol Motif C
Tko CDC21-1140NoneL362SGKSSSAAGL/CHN/TAAAVRDEFTCDC21-b
Tko CDC21-2335Q553SAIHEALEQQ/SHN/TISISKAGITCDC21-c
Tko Helicase403DODL331IKVITATPTL/CHN/SAGINLPAFRhelicase-a, Motif V of DEAD and DEAH box helicases
Tko IF2546DODK20AVLGHVDHGK/CHN/TTLLDRIRHTIF2-a, ATP/GTP-binding site motif A (P-loop)
Tko KlbA523DODG511FTAMNTGHNG/ASN/CMGTIHANSAklbA-a
Tko LHR525DODV345LKRGELKAVV/CKN/SSTSLELGIDLHR-a
Tko Pol-1 (Pko Pol-1)360PI-PkoIDODR406WENIVYLDFR/CHN/SLYPSIIITHpol-a, Pol Motif A
Tko Pol-2 (Pko Pol-2)536PI-PkoIIDODN851RQRAIKILAN/SHN/SYYGYYGYARpol-b, Pol Motif B
Tko Pol-II474DODN963PYYHAAKRRN/CHQ/CDGDEDAVMLpol_II-a
Tko RFC540DODK59LFAGPPGVGK/CHN/TTAALALARERFC-a, ATP/GTP-binding site motif A (P-loop)
Tko RIR1-1454DODG301VAMIQKAGGG/CHN/TGLNFSKLRPRIR1-a
Tko RIR1-2382DODP914KGEKIRATNP/CHN/CGEEPLYEYERIR1-b
Tko RadA482DODK149EVFGEFGSGK/CHN/TQLAHTLAVMrecA-c, ATP/GTP-binding site motif A (P-loop)
Tko TopA511DODY315IAQKLYEKGY/CHN/CSYPRTSSQKtop-a, 2 aa before the catalytic Y residue
Tko r-Gyr489DODL960LAQDLFEAGL/CHN/CTYHRTDSTHtop-a, 2 aa before the catalytic Y residue
Tli Pol-1538PI-TliIIDODN494RQRAIKLLAN/SHN/SYYGYMGYPKpol-b, Pol Motif B
Tli Pol-2390PI-TliIDODD1081KRGFKVLYAD/SHN/TDGFYATIPGpol-c, Pol Motif C
Ton-NA1 Pol535DODN491RQRAIKILAN/SHN/SYYGYYGYPRpol-b, Pol Motif B
Tpe Pol390DODD540KYGFKVLYAD/SHN/TDGFFATIPGpol-c, Pol Motif C
Tsp-GE8 Pol-1535DODN491RQRAIKILAN/SHN/SYYGYYGYAKpol-b, Pol Motif B
Tsp-GE8 Pol-2389DODD1075KFGFKVLYAD/SHN/TDGFFATIPGpol-c, Pol Motif C
Tsp-GT Pol-1537DODN491RQKAIKILAN/SHN/SYYGYYGYARpol-b, Pol Motif B
Tsp-GT Pol-2389DODD1077RFGFKVLYAD/SHN/TDGFFATIPGpol-c, Pol Motif C
Tsp-OGL-20P Pol537DODN491RQRAIKILAN/SHN/SYYGYYGYARpol-b, Pol Motif B