REBASE Home

Lactobacillus casei ATCC 334

[index] - [schematics] - [save as Word doc]
 REBASE Genomes

Putative Lactobacillus casei ATCC 334 RM systems

Ref: Makarova,K. et al. Proc. Natl. Acad. Sci. U.S.A. 103 (42), 15611-15616 (2006)

REBASE ref # 9760

Complete sequence: 2,895,264 bp

GenBank #: CP000423 (NC_008526)

REBASE acronym: Lca334

Org_num: 4553

 

All begin LSEI_

Type I
ORF Gene Most similar Specificity Name
 
2089 711 aa hypothetical protein
2090 S S2.LpaPCH1ORFAP (58% identity) S1.Lca334ORF2094P
2091 Integrase
2092 Transposase, IS30 family
2093 S S1.Lpa2ORF4795P (39% identity) S2.Lca334ORF2094P
2094 M M.LpaPCH1ORFAP (100% identity) M.Lca334ORF2094P
2095 R LpaPCH1ORFAP (99% identity) Lca334ORF2094P
2096 93 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
569 59 aa hypothetical protein
570 M M.LorSG293ORF220290P (34% identity) M.Lca334ORF570P
571 Transposase, IS30 family
 
584 467 aa hypothetical protein
585 R LorSG293ORF220290P (90% identity) Lca334ORF586P
586 M M.Lma596ORF12230P (69% identity) M.Lca334ORF586P
587 Transposase, IS30 family
Tech Support Feedback NEB Overview Site Map Trademarks Legal and Disclaimers Privacy Cookie Policy Terms of Use
© Copyright 2023 New England Biolabs. All Rights Reserved.