Treponema brennaborense DSM 12168 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Treponema brennaborense DSM 12168 RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12825
Complete sequence: 3,055,580 bp
GenBank #: CP002696 (NC_015500)
REBASE acronym: Tbr12168
Org_num: 7066
All begin Trebr_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 402 | 66 aa hypothetical protein | |||
| 403 | R | CspLGHORF31765P (69% identity) | Tbr12168ORF412P | |
| 404 | 237 aa hypothetical protein | |||
| 405 | 462 aa hypothetical protein | |||
| 406 | 135 aa hypothetical protein | |||
| 407 | Radical SAM domain protein | |||
| 408 | 72 aa hypothetical protein | |||
| 409 | S | S.Mdi47132ORF4265P (41% identity) | S.Tbr12168ORF412P | |
| 410 | 202 aa hypothetical protein | |||
| 411 | virulence protein | |||
| 412 | M | M.PspCJ43ORF3990P (59% identity) | M.Tbr12168ORF412P | |
| 413 | pseudogene | |||
| 2440 | 268 aa hypothetical protein | |||
| 2441 | S | S2.TspC2812ORF990P (33% identity) | S.Tbr12168ORF2442P | |
| 2442 | M | M.PmeBin235ORFDP (72% identity) | M.Tbr12168ORF2442P | |
| 2443 | R | Rba2021IIIP (63% identity) | Tbr12168ORF2442P | |
| 2444 | 81 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 82 | transposase IS116/IS110/IS902 family protein | |||
| 83 | R | AbaDB008ORFAP (32% identity) | CCWWGG | Tbr12168ORF84P |
| 84 | M | M.Dma2077ORF42350P (68% identity) | CCWWGG | M.Tbr12168ORF84P |
| 86 | Methyltransferase type 11 | |||
| 355 | metallophosphoesterase | |||
| 356 | M | M.Tso203ORFBP (51% identity) | M.Tbr12168ORF356P | |
| 357 | Phosphonate-transporting ATPase | |||
| 509 | Leucyl/phenylalanyl-tRNA--protein transferase | |||
| 510 | M | M.CspNA2ORF2420P (49% identity) | GAATTC | M.Tbr12168ORF510P |
| 511 | LrgB family protein | |||
| 2181 | NADPH-dependent FMN reductase | |||
| 2182 | M | 135 aa hypothetical protein | M.Tbr12168ORF2182P | |
| 2183 | MATE efflux family protein | |||
| 2459 | transcriptional regulator | |||
| 2460 | RM | Sjo781ORF6790P (41% identity) | Tbr12168ORF2460P | |
| 2461 | type IIS restriction/modification | |||
| 2460 | type IIS restriction endonuclease, putative | |||
| 2461 | RM | Amu2454ORFEP (18% identity) | Tbr12168ORF2461P | |
| 2462 | Resolvase domain protein | |||