Nitrosomonas eutropha C91 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Nitrosomonas eutropha C91 RM systems
Ref: Copeland,A. et al. unpublished
REBASE ref #
| Sequence length: | GenBank #: | |
| Chromosome: | 2,661,057 bp | CP000450 (NC_008344) |
| plasmid 1: | 65,132 bp | CP000451 (NC_008341) |
| plasmid 2: | 55,635 bp | CP000452 (NC_008342) |
REBASE acronym: NeuC
Org_num: 4524
All begin Neut_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 536 | thymidylate kinase | |||
| 537 | R | AprV6ORF15765P (86% identity) | NeuCORF541P | |
| 538 | 302 aa hypothetical protein | |||
| 539 | 190 aa hypothetical protein | |||
| 540 | S | S.MspTWE2ORF180P (47% identity) | S.NeuCORF541P | |
| 541 | M | S.AfeV8ORFAP (42% identity) | M.NeuCORF541P | |
| 542 | transporter, NhaC family | |||
| 1941 | protein of unknown function DUF853, NPT | |||
| 1942 | M | type I site-specific deoxyribonuclease HsdM | M.NeuCORF1942P | |
| 1943 | mobilization/cell filamentation proteins-like | |||
| 2447 | RNA polymerase, sigma 28 subunit, | |||
| 2448 | M | type I restriction-modification system | M.NeuCORF2448P | |
| 2449 | 145 aa hypothetical protein | |||
| 2450 | ISRm2011-2 transposase protein | |||
| 2451 | pseudogene | |||
| ??? | R | type I restriction endonuclease subunit R | NeuCORF2448P | |
| 2452 | Integrase, catalytic region | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 114 | 187 aa conserved hypothetical protein | |||
| 115 | M | M.Pli2SM5ORF1341P (77% identity) | M.NeuCORF115P | |
| 116 | DNA topoisomerase III | |||
| 1333 | 267 aa hypothetical protein | |||
| 1334 | RM | M.BspG001ORF32140P (61% identity) | NeuCORF1334AP | |
| 1335 | RM | BspG001ORF32140P (93% identity) | NeuCORF1334BP | |
| 1336 | ATP-dependent helicase HrpA | |||
| plasmid 1 | ||||
| 2560 | death-on-curing family protein | |||
| 2561 | RM | NstHISORF2288P (54% identity) | NeuCORF2561P | |
| 2562 | transposase Tn3 family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid 1 | ||||
| 2545 | UvrD/REP helicase | |||
| 2546 | M | M.NeuCORF2604P (100% identity) | M.NeuCORF2546P | |
| 2547 | 897 aa hypothetical protein | |||
| plasmid 2 | ||||
| 2603 | 897 aa hypothetical protein | |||
| 2604 | M | M.NeuCORF2546P (100% identity) | M.NeuCORF2604P | |
| 2605 | UvrD/REP helicase | |||