Ref: Copeland,A. et al. unpublished

REBASE ref #

Sequence length:GenBank #:
Chromosome: 2,661,057 bp CP000450 (NC_008344)
plasmid 1: 65,132 bp CP000451 (NC_008341)
plasmid 2: 55,635 bp CP000452 (NC_008342)

REBASE acronym: NeuC

Org_num: 4524

 

All begin Neut_

Type I
ORF Gene Most similar Specificity Name
 
Chromosome
 
536 thymidylate kinase
537 R AprV6ORF15765P (86% identity) NeuCORF541P
538 302 aa hypothetical protein
539 190 aa hypothetical protein
540 S S.MspTWE2ORF180P (47% identity) S.NeuCORF541P
541 M S.AfeV8ORFAP (42% identity) M.NeuCORF541P
542 transporter, NhaC family
 
1941 protein of unknown function DUF853, NPT
1942 M type I site-specific deoxyribonuclease HsdM M.NeuCORF1942P
1943 mobilization/cell filamentation proteins-like
 
2447 RNA polymerase, sigma 28 subunit,
2448 M type I restriction-modification system M.NeuCORF2448P
2449 145 aa hypothetical protein
2450 ISRm2011-2 transposase protein
2451 pseudogene
??? R type I restriction endonuclease subunit R NeuCORF2448P
2452 Integrase, catalytic region
Type II
ORF Gene Most similar Specificity Name
 
Chromosome
 
114 187 aa conserved hypothetical protein
115 M M.Pli2SM5ORF1341P (77% identity) M.NeuCORF115P
116 DNA topoisomerase III
 
1333 267 aa hypothetical protein
1334 RM Ljo11533IIA (53% identity) NeuCORF1334AP
1335 RM Ljo11533IIB (61% identity) NeuCORF1334BP
1336 ATP-dependent helicase HrpA
 
plasmid 1
 
2560 death-on-curing family protein
2561 RM NstHISORF2288P (54% identity) NeuCORF2561P
2562 transposase Tn3 family protein
Type III
ORF Gene Most similar Specificity Name
 
plasmid 1
 
2545 UvrD/REP helicase
2546 M M.NeuCORF2604P (100% identity) M.NeuCORF2546P
2547 897 aa hypothetical protein
 
plasmid 2
 
2603 897 aa hypothetical protein
2604 M M.NeuCORF2546P (100% identity) M.NeuCORF2604P
2605 UvrD/REP helicase