Gallibacterium anatis UMN179 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Gallibacterium anatis UMN179 RM systems
Ref: Johnson,T.J. et al. unpublished
REBASE ref # 13007
Complete sequence: 2,687,335 bp
GenBank #: CP002667 (NC_015460)
REBASE acronym: Gan179
Org_num: 6970
All begin UMN179_, UMN179_r
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 642 | 53 aa hypothetical protein | |||
| 643 | M | M.Gan12ORF12055P (85% identity) | M.Gan179ORF643P | |
| 644 | S | S.Hpa27794ORFBP (41% identity) | S.Gan179ORF643P | |
| 645 | 351 aa hypothetical protein | |||
| 647 | 384 aa hypothetical protein | |||
| 648 | R | Gan12ORF12055P (99% identity) | Gan179ORF648P | |
| 5 | pseudogene | |||
| 951 | 194 aa hypothetical protein | |||
| 952 | R | Gan12ORF3225P (100% identity) | Gan179ORF952P | |
| 953 | RecF/RecN/SMC N terminal domain protein | |||
| 956 | Virulence protein | |||
| 957 | S | S1.GanBJF12ORF12720P (63% identity) | S.Gan179ORF957P | |
| 958 | site-specific tyrosine recombinase XerC | |||
| 961 | sialic acid transporter | |||
| 962 | R | GanTH22ORF2370P (98% identity) | Gan179ORF966P | |
| 963 | Divergent AAA domain protein | |||
| 964 | S | S.Apap4ORF1655P (60% identity) | S.Gan179ORF966P | |
| 965 | Virulence protein | |||
| 966 | M | M.GanDFS02ORF11690P (99% identity) | M.Gan179ORF966P | |
| 967 | peptidyl-prolyl cis-trans isomerase | |||
| 1204 | 16S rRNA methyltransferase GidB | |||
| 1205 | M | M.Gpa4ORF11605P (72% identity) | M.Gan179ORF1205P | |
| 1206 | 667 aa conserved hypothetical protein, divergent AAA | |||
| 1207 | S | S.Mbo33362ORF8915P (26% identity) | S.Gan179ORF1205P | |
| 1208 | R | HpaNagORF1654P (72% identity) | Gan179ORF1205P | |
| 1209 | tRNA uridine 5-carboxymethylaminomethyl | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 201 | 68 aa conserved hypothetical protein | |||
| 202 | R | HinII8ORF12200P (65% identity) | GTCGAC | Gan179ORF203P |
| 203 | M | M.HinII8ORF12200P (81% identity) | GTCGAC | M.Gan179ORF203P |
| 204 | 150 aa hypothetical protein | |||
| 1485 | 113 aa hypothetical protein | |||
| 1486 | M | M.GanTH22ORF11095P (98% identity) | GATC | M.Gan179ORF1486P |
| 1487 | 3-dehydroquinate synthase | |||
| 1557 | 551 aa conserved hypothetical protein | |||
| 1558 | RM | Gan922ORF8955P (82% identity) | Gan179ORF1558P | |
| 1559 | 303 aa hypothetical protein | |||
| 1558 | Eco57I restriction endonuclease | |||
| 1559 | RM | Gan922ORF8955P (17% identity) | Gan179ORF1559P | |
| 1560 | lipoprotein | |||
| 1643 | 164 aa hypothetical protein | |||
| 1644 | M | M.Gan11413ORF1319P (85% identity) | M.Gan179ORF1644P | |
| 1645 | 81 aa hypothetical protein | |||
| 1890 | threonine synthase | |||
| 1891 | M | M.GanBJF12ORF8000P (100% identity) | CATG | M1.Gan179ORF1891P |
| 1892 | R | GanBJF12ORF7990P (100% identity) | CATG | Gan179ORF1891P |
| 1893 | M | M.GanBJF12ORF7990P (99% identity) | CATG | M2.Gan179ORF1891P |
| 1894 | Transposase, Mutator family | |||
| 2365 | Replication protein P | |||
| 2366 | M | M.Gan12ORF905P (82% identity) | GATC | M.Gan179ORF2366P |
| 2367 | NinB protein | |||
| 2507 | 90 aa hypothetical protein | |||
| 2508 | M | M.Gan922ORF4620P (95% identity) | M.Gan179ORF2508P | |
| 2509 | 250 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1296 | 60 aa hypothetical protein | |||
| 1297 | M | DNA methylase | M.Gan179ORF1297P | |
| 1298 | 2-nitropropane dioxygenase | |||
| 1314 | 60 aa hypothetical protein | |||
| 1315 | M | M.Mca23246IP (60% identity) | M.Gan179ORF1315P | |
| 1316 | R | Gan11413ORF2215P (93% identity) | Gan179ORF1315P | |
| 1317 | glutamyl-tRNA synthetase | |||