Escherichia coli CFT073 |
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Putative Escherichia coli CFT073 RM systems
Ref: Welch,R.A. et al. Proc. Natl. Acad. Sci. U.S.A. 99 (26), 17020-17024 (2002)
REBASE ref # 7801
Complete sequence: 5,231,428 bp
GenBank #: AE014075 (NC_004431)
REBASE acronym: EcoCFT
Org_num: 3607
All begin c
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5422 | 113 aa Hypothetical protein yjiW | |||
| 5423 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoCFTI |
| 5424 | M | M.EcoDi2ORF4941P (100% identity) | GAGNNNNNNNGTCA | M.EcoCFTI |
| 5425 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoCFTI |
| 5426 | 557 aa Conserved hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 940 | 71 aa Hypothetical protein ybiI | |||
| 941 | M | M.EcoUTI89ORFBP (100% identity) | GATC | M.EcoCFTORF941P |
| 942 | replication protein for prophage | |||
| 1554 | 146 aa Unknown protein encoded within prophage | |||
| 1555 | M | M.EcoleORFAP (100% identity) | GATC | M.EcoCFTORF1555P |
| 1556 | 113 aa Hypothetical protein | |||
| 2378 | 306 aa Hypothetical transport protein yedA | |||
| 2379 | V | V.EcosC25DcmP (100% identity) | V.EcoCFTDcmP | |
| 2380 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoCFTDcmP |
| 2381 | 225 aa Hypothetical protein yedJ | |||
| 4027 | DNA-binding protein fis | |||
| 4028 | M | M.EcoUTORF3704P (100% identity) | ATGCAT | M.EcoCFTORF4028P |
| 4029 | 68 aa Hypothetical protein yhdU | |||
| 4156 | Ribulose-phosphate 3-epimerase | |||
| 4157 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCFTDamP |
| 4158 | DamX protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5371 | Prophage P4 integrase | |||
| 5372 | R | EcoUTI89IP (100% identity) | CACAG | EcoCFTIIP |
| 5373 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoCFTII |
| 5374 | 114 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5420 | 306 aa Hypothetical protein yfcI | |||
| 5421 | R | EcoKE51GmrSDP (100% identity) | EcoCFTGmrSDP | |
| 5422 | 113 aa Hypothetical protein yjiW | |||