Ref: Lucas,S. et al. unpublished

REBASE ref # 14333

Complete sequence: 2,731,853 bp

GenBank #: CP002631 (NC_015385)

REBASE acronym: Tsu2489

Org_num: 6883

 

All begin Tresu_

Type I
ORF Gene Most similar Specificity Name
 
192 Tex-like protein
193 M M.TreCHPAORF11600P (96% identity) M.Tsu2489ORF193P
194 KilA-N, DNA-binding domain protein
195 protein of unknown function DUF1016
196 S S.CspLGHORF29645P (40% identity) S.Tsu2489ORF193P
197 445 aa hypothetical protein
198 761 aa hypothetical protein ACD_11C00115G0016
199 transposase IS3/IS911 family protein
200 filamentation induced by cAMP protein Fic
201 R TsuC27ORF13455P (98% identity) Tsu2489ORF193P
202 zinc/iron permease
 
364 filamentation induced by cAMP protein Fic
??? M type I restriction endonuclease subunit M M.Tsu2489ORF365P
366 R DEAD/DEAH box helicase Tsu2489ORF365P
367 glycyl-tRNA synthetase
 
512 63 aa hypothetical protein
513 M type I restriction-modification system, M M.Tsu2489ORF513P
514 ATP-binding protein
515 208 aa hypothetical protein
??? S S1.Sjo781ORF6425P (42% identity) S.Tsu2489ORF513P
518 anticodon nuclease prrc
519 R type I site-specific deoxyribonuclease, HsdR Tsu2489ORF513P
520 pseudogene
 
582 XRE family transcriptional regulator
583 R Csp13003ORF829P (80% identity) Tsu2489ORF585P
584 S S.Rla82B1ORFNP (29% identity) S1.Tsu2489ORF585P
585 M M.Csp6137ORF876P (83% identity) M.Tsu2489ORF585P
586 filamentation induced by cAMP protein Fic
587 64 aa hypothetical protein
588 194 aa hypothetical protein
589 S S.Cla2308ORFAP (33% identity) S2.Tsu2489ORF585P
590 210 aa hypothetical protein
 
1089 137 aa hypothetical protein
1090 R Sal196ORF8610P (40% identity) Tsu2489ORF1099P
1091 67 aa hypothetical protein
1092 96 aa hypothetical protein
1093 S S3.Tsu2489ORF1099P (48% identity) S1.Tsu2489ORF1099P
1094 integrase family protein
1095 S S.CpeENE18ORF555P (28% identity) S2.Tsu2489ORF1099P
1096 integrase family protein
1097 S S.Csp356ORF117P (55% identity) S3.Tsu2489ORF1099P
1098 transcriptional regulator
1099 M N-6 DNA methylase M.Tsu2489ORF1099P
1100 134 aa hypothetical protein
 
1105 protein of unknown function DUF1778
1106 S S2.Tpu846ORF1025P (59% identity) S.Tsu2489ORF1106P
1107 restriction modification system DNA specificity
 
1106 restriction modification system DNA specificity
1107 S S3.Tpu835ORF1055P (26% identity) S.Tsu2489ORF1107P
1108 156 aa hypothetical protein
 
1112 protein of unknown function DUF114
1113 S S1.TdeOT2BORF210P (48% identity) S.Tsu2489ORF1114P
1114 M M.Tde853ORF225P (89% identity) M.Tsu2489ORF1114P
1115 R TspB152ORF210P (80% identity) Tsu2489ORF1114P
1116 sulfatase-modifying factor protein
Type II
ORF Gene Most similar Specificity Name
 
109 516 aa hypothetical protein
110 M M.TspC2812ORF1945P (68% identity) M.Tsu2489ORF110P
111 transposase IS4 family protein
 
303 helicase domain protein
304 RM Tsp799ORF12865P (26% identity) Tsu2489ORF304P
305 265 aa hypothetical protein
 
529 125 aa hypothetical protein
530 M M.AspAD10ORF2565P (47% identity) M.Tsu2489ORF530P
531 R R1.TruRU1ORF1565P (25% identity) R1.Tsu2489ORF530P
532 R R2.Psp27889ORF345P (15% identity) R2.Tsu2489ORF530P
533 404 aa hypothetical protein
 
539 71 aa hypothetical protein
540 M M.Msp2109ORF2860P (60% identity) M.Tsu2489ORF540P
541 R Fsp2445ORF7590P (64% identity) Tsu2489ORF540P
542 C C.Mvi102ORF48770P (41% identity) C.Tsu2489ORF540P
544 histidine kinase
 
581 72 aa hypothetical protein
582 C C.Tsu2489IVP (80% identity) C.Tsu2489ORF582P
583 Type I site-specific deoxyribonuclease
 
666 124 aa hypothetical protein
667 C C.Tsu2489ORF582P (80% identity) C.Tsu2489IVP
668 M M3.Tpe3552ORF3110P (85% identity) GGATG M1.Tsu2489IV
669 M M2.TpeTA4ORF644P (87% identity) GGATG M2.Tsu2489IV
670 R Tpe3552ORF3110P (95% identity) GGATG Tsu2489IVP
671 M M1.TpeTA4ORF644P (85% identity) GGATG M3.Tsu2489IV
672 747 aa hypothetical protein
 
693 transposase IS116/IS110/IS902 family protein
694 R Cra508ORF8925P (40% identity) GGWCC Tsu2489ORF695P
695 M M.Phe2169ORFDP (49% identity) GGWCC M.Tsu2489ORF695P
696 222 aa hypothetical protein
 
702 248 aa hypothetical protein
703 M M.Psp8BORF11P (58% identity) CCWGG M.Tsu2489III
704 R Cba12CBH8ORF20840P (62% identity) CCWGG Tsu2489IIIP
705 transposase IS116/IS110/IS902 family protein
 
712 416 aa hypothetical protein
713 M M.MspH5ORF3920P (64% identity) WCCGGW M.Tsu2489ORF713P
714 R Bst2500ORFAP (51% identity) WCCGGW Tsu2489ORF713P
715 transposase IS116/IS110/IS902 family protein
 
928 pseudogene
929 RM helicase Tsu2489ORF929P
930 helix-turn-helix domain protein
 
1678 138 aa hypothetical protein
1679 R PspRep29ORF1475P (47% identity) GGCC Tsu2489ORF1682P
1680 168 aa hypothetical protein
1681 80 aa hypothetical protein
1682 M DNA (cytosine-5-)-methyltransferase GGCC M.Tsu2489ORF1682P
1683 236 aa hypothetical protein
 
1685 Methyltransferase type 11
1686 R Tsp45I type II restriction protein GTSAC Tsu2489IIP
1687 M M.TphV1ORF30070P (61% identity) GTSAC M.Tsu2489II
1688 histidine kinase
 
1690 YD repeat-containing protein
1691 M M1.Tsp4132ORF6400P (79% identity) GATC M1.Tsu2489ORF1691P
1692 M M2.Mbo237TORF6077P (18% identity) GATC M2.Tsu2489ORF1691P
1693 156 aa hypothetical protein
1694 R Tsp855ORF8765P (76% identity) GATC Tsu2489ORF1691P
1695 179 aa hypothetical protein
1696 M M2.TruRU1ORF5445P (71% identity) GATC M3.Tsu2489ORF1691P
1697 91 aa hypothetical protein
 
1986 358 aa hypothetical protein
1987 M M.Cmi15897ORF2336P (71% identity) GGNNCC M.Tsu2489ORF1987P
1988 R Nsu69ORF325P (70% identity) GGNNCC Tsu2489ORF1987P
1989 transcriptional regulator, LysR family
 
2144 84 aa hypothetical protein
2145 M M.TruRU1ORF10865P (74% identity) TTTAAA M.Tsu2489V
2146 Protein of unknown function DUF2130
 
2157 284 aa hypothetical protein
2158 M M.TsuC27ORF2710P (99% identity) RAATTY M.Tsu2489I
2159 MATE efflux family protein
Type III
ORF Gene Most similar Specificity Name
 
644 transcriptional regulator, XRE family
645 M M.Nme8669ORF890P (34% identity) M.Tsu2489ORF645P
646 R Hsp6451ORF10445P (36% identity) Tsu2489ORF645P
647 transposase IS116/IS110/IS902 family protein
 
1192 Protein of unknown function DUF2081
1193 R TspC2812ORF10370P (96% identity) Tsu2489ORF1195P
1194 350 aa hypothetical protein
1195 M M.TspC2812ORF10370P (95% identity) M.Tsu2489ORF1195P
1196 596 aa hypothetical protein
Type IV
ORF Gene Most similar Specificity Name
 
1670 37 aa hypothetical protein
1671 R DNA repair helicase Tsu2489ORF1671P
1672 NUDIX hydrolase