Oscillatoria species PCC 6506 |
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Putative Oscillatoria species PCC 6506 RM systems
Ref: Mejean,A. et al. J. Bacteriol. 192 (19), 5264-5265 (2010)
REBASE ref # 12077
Contig set: 6,676,705 bp
GenBank #: CACA00000000 (NZ_CACA00000000)
REBASE acronym: Osp6506
Org_num: 6396
All begin OSCI_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1610001 | S | S1.MspCWC01ORF1195P (33% identity) | S.Osp6506ORF1610001P | |
| 1610002 | 230 aa hypothetical protein | |||
| 1610002 | 230 aa hypothetical protein | |||
| 1610003 | R | Nca2107ORF54080P (91% identity) | Osp6506ORF1610003P | |
| 1610004 | 89 aa conserved hypothetical protein | |||
| 1750003 | exported hypothetical protein | |||
| 1750005 | M | M.Asp90ORF12925P (90% identity) | M.Osp6506ORF1750005P | |
| ??? | S | type IC HsdS subunit | S.Osp6506ORF1750005P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10020 | two-component response regulator | |||
| 10021 | R | Pag758ORF42P (79% identity) | GTCGAC | Osp6506ORF10022P |
| 10022 | M | M.Pag758ORF42P (80% identity) | GTCGAC | M.Osp6506ORF10022P |
| 10023 | 114 aa conserved hypothetical protein | |||
| 340032 | adenylosuccinate lyase | |||
| 340033 | C | C.MvaFGP2ORF3885P (80% identity) | C.Osp6506ORF340035P | |
| 340034 | R | MvaFGP2ORF3885P (21% identity) | RCATGY | Osp6506ORF340035P |
| 340035 | M | M.MvaFGP2ORF3885P (41% identity) | RCATGY | M.Osp6506ORF340035P |
| 340036 | Mg chelatase, subunit ChlI | |||
| 410003 | 55 aa hypothetical protein | |||
| 410004 | M | M.Csp7424ORF1833P (28% identity) | CCATGG | M.Osp6506ORF410004P |
| 410005 | 44 aa hypothetical protein | |||
| 1460018 | 200 aa conserved hypothetical protein | |||
| 1460019 | RM | Oni7112ORF6389P (77% identity) | Osp6506ORF1460019P | |
| 1460020 | fdxN element excision controlling factor | |||
| 2600001 | lipid-A-disaccharide synthase | |||
| 2600002 | M | M.Tca511288ORF15105P (69% identity) | CGATCG | M.Osp6506ORF2600002P |
| 2600003 | 57 aa conserved hypothetical protein | |||
| 2700003 | ribose-phosphate pyrophosphokinase | |||
| 2700004 | M | M.Swa224ORF1715P (45% identity) | M.Osp6506ORF2700004P | |
| 2700005 | S | S.Lsp32AORF18170P (54% identity) | S.Osp6506ORF2700004P | |
| 2700006 | R | VchSXTORFBP (43% identity) | CCANNNNNNTGG | Osp6506ORF2700004P |
| 2700007 | DNA mismatch repair protein mutS | |||
| 3010021 | 53 aa hypothetical protein | |||
| 3010022 | M | M.NpuORF2563P (79% identity) | CGTACG | M.Osp6506ORF3010022P |
| 3010023 | exported hypothetical protein | |||
| 3150028 | 169 aa conserved hypothetical protein | |||
| 3150029 | M | M.NspNUC1ORF4812P (33% identity) | CCTAGG | M.Osp6506ORF3150029P |
| 3150030 | hexapaptide repeat-containing transferase | |||
| 3360029 | 267 aa conserved hypothetical protein | |||
| 3360030 | RM | AflORF10110P (59% identity) | Osp6506ORF3360030P | |
| 3360031 | 70 aa conserved hypothetical protein | |||
| 3370019 | Phosphomethylpyrimidine synthase | |||
| 3370020 | M | M.Ocy1ORF10500P (88% identity) | GGCC | M.Osp6506ORF3370020P |
| 3370021 | 186 aa conserved hypothetical protein | |||
| 3400047 | 983 aa hypothetical protein | |||
| 3400048 | M | M.Mst26271ORF4620P (57% identity) | M.Osp6506ORF3400048P | |
| 3400049 | 46 aa hypothetical protein | |||
| 3590039 | 3-deoxy-7-phosphoheptulonate synthase | |||
| 3590040 | M | M.Oni7112ORF5427P (81% identity) | GGWCC | M.Osp6506ORF3590040P |
| 3590041 | 316 aa hypothetical protein | |||
| 3730013 | peptide chain release factor 2 | |||
| 3730014 | R | Ocy1ORF14765P (87% identity) | ACRYGT | Osp6506ORF3730015P |
| 3730015 | M | M.Ocy1ORF14765P (82% identity) | ACRYGT | M.Osp6506ORF3730015P |
| 3730016 | Filamentous hemagglutinin family outer | |||
| 3870003 | Sensor protein | |||
| 3870004 | M | M.Ocy1ORF615P (83% identity) | RCCGGY | M.Osp6506ORF3870004P |
| 3870005 | (Dimethylallyl)adenosine tRNA | |||
| 3910013 | 30S ribosomal protein S1 | |||
| 3910014 | M | M.Ocy1ORF5635P (92% identity) | GDGCHC | M.Osp6506ORF3910014P |
| 3910015 | 110 aa hypothetical protein | |||
| 4000004 | 172 aa hypothetical protein | |||
| 4000005 | M | M.Nsp7524ORF1537P (71% identity) | GGTNACC | M.Osp6506ORF4000005P |
| 4000006 | R | Ccy1203ORF21680P (73% identity) | GGTNACC | Osp6506ORF4000005P |
| 4000007 | Integrase family protein | |||
| 4110050 | 215 aa conserved hypothetical protein | |||
| 4110051 | M | M.Ocy1ORF14375P (85% identity) | GATC | M.Osp6506ORF4110051P |
| 4110052 | 88 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3410004 | 47 aa hypothetical protein | |||
| 3410005 | M | M.Pag204ORF45110P (77% identity) | M.Osp6506ORF3410005P | |
| 3410006 | 113 aa conserved hypothetical protein | |||
| 3410007 | Similarity (fragment) | |||
| 3410008 | 225 aa conserved hypothetical protein | |||
| 3410009 | R | Pag204ORF45110P (87% identity) | Osp6506ORF3410005P | |
| 3410010 | 583 aa conserved hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3360013 | Ferritin-1 | |||
| 3360014 | R | Mva003McrCP (76% identity) | Osp6506McrCP | |
| 3360015 | R | Oni7112McrBP (31% identity) | Osp6506McrBP | |
| 3360016 | 39 aa hypothetical protein | |||
| 3890016 | AAA ATPase, central region | |||
| 3890017 | R | Asp90McrB3P (70% identity) | Osp6506McrB2P | |
| 3890018 | 39 aa hypothetical protein | |||