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Putative Neisseria meningitidis 961-5945 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. In press
REBASE ref # 12558
GenBank #: AEQK00000000
REBASE acronym: Nme961
Org_num: 6785
All begin NMB9615945_
Type II | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
96 | site-specific DNA methylase, truncation | |||
??? | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme961ORF97P |
98 | S1 RNA binding domain protein | |||
96 | site-specific DNA methylase, truncation | |||
??? | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme961ORF90P |
98 | S1 RNA binding domain protein | |||
116 | UDP-glucose 4-epimerase GalE | |||
117 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme961ORF117P |
118 | S1 RNA binding domain protein | |||
348 | IS1106 transposase | |||
349 | M | M.NmeMBW2I (99% identity) | CCTTC | M.Nme961ORF349P |
350 | R | NmeW135ORF222P (100% identity) | CCTTC | Nme961ORF349P |
653 | transposase | |||
??? | M | M.NmeS4ORFCP (100% identity) | GCGCGC | M.Nme961ORF654P |
655 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme961ORF654P |
656 | alanyl-tRNA synthetase | |||
1341 | ADP-glyceromanno-heptose 6-epimerase | |||
1342 | R | NmeS4ORFEP (98% identity) | Nme961ORF1343P | |
1343 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme961ORF1343P |
1344 | hldE bifunctional protein, domain I | |||
1426 | Phenylalanyl-tRNA synthetase beta chain | |||
1427 | R | Nme9293ORF175P (100% identity) | RCCGGY | Nme961ORF1427P |
1428 | M | M.Nme9293ORF175P (100% identity) | RCCGGB | M.Nme961ORF1427P |
1429 | V | V.NmeS4ORFGP (100% identity) | V.Nme961ORF1427P | |
1430 | phenylalanyl-tRNA synthetase, alpha subunit | |||
1831 | 159 aa hypothetical protein | |||
1832 | M | M2.NmeS4ORFAP (100% identity) | GATC | M1.Nme961ORF1832P |
1833 | M | M1.NmeS4ORFAP (99% identity) | GATC | M2.Nme961ORF1832P |
1834 | leucyl-tRNA synthetase | |||
1948 | ATP-dependent RNA helicase hrpA | |||
1949 | V | V.NmeS4ORFFP (100% identity) | V.Nme961ORF1951P | |
1950 | R | NmeS4ORFFP (100% identity) | CCGG | Nme961ORF1951P |
1951 | M | M.NmeS4ORFFP (94% identity) | CCGG | M.Nme961ORF1951P |
1952 | transposase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
843 | L-lactate dehydrogenase | |||
844 | R | NmeS4ORFDP (100% identity) | ACACC | Nme961ORF845P |
845 | M | M.Nme18755ORFHP (100% identity) | ACACC | M.Nme961ORF845P |
846 | tRNA pseudouridine synthase B | |||
946 | hypothetical protein | |||
947 | R | Nme77ORF1599P (100% identity) | Nme961ORF946P | |
948 | PP-loop family protein |