Neisseria meningitidis CU385 |
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Putative Neisseria meningitidis CU385 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. In press
REBASE ref # 12558
GenBank #: AEQJ00000000
REBASE acronym: Nme385
Org_num: 6788
All begin NMBCU385_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 942 | 137 aa hypothetical protein | |||
| ??? | M | M.Nme44ORFDP (99% identity) | M.Nme385ORFCP | |
| 944 | uracil-DNA glycosylase | |||
| 1296 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1297 | R | NmeMC58ORF829BP (100% identity) | Nme385ORF1303AP | |
| 1298 | IS1655, transposase | |||
| 1299 | R | 128 aa hypothetical protein | Nme385ORF1303BP | |
| 1300 | anticodon nuclease | |||
| 1301 | S | S.NmeH44ORF1653P (100% identity) | S.Nme385ORF1303P | |
| 1302 | DNA-binding protein | |||
| 1303 | M | M.NmeMC58ORF829P (100% identity) | M.Nme385ORF1303P | |
| 1304 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24 | hypothetical protein | |||
| 25 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme385ORF25P |
| 26 | S1 RNA binding domain protein | |||
| 874 | ribonucleoside-diphosphate reductase, alpha | |||
| 875 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.Nme385ORF875P |
| 876 | R | type II restriction enzyme EcoRII | CCWGG | Nme385ORF875P |
| 877 | ribonucleoside-diphosphate reductase, beta | |||
| 1304 | ADP-glyceromanno-heptose 6-epimerase | |||
| ??? | R | Nme21362ORF2875P (100% identity) | CCAGA | Nme385ORF1306P |
| 1306 | M | M.NmeMC58III (100% identity) | CCAGA | M.Nme385ORF1306P |
| 1307 | hldE bifunctional protein, domain I | |||
| 1402 | phenylalanyl-tRNA synthetase, beta subunit | |||
| 1403 | M | M2.NmeMC58II (100% identity) | GACGC | M1.Nme385ORF1403P |
| 1404 | R | NmeMC58IIP (100% identity) | GACGC | Nme385ORF1403P |
| 1405 | M | M1.NmeMC58IIP (100% identity) | GACGC | M2.Nme385ORF1403P |
| 1406 | phenylalanyl-tRNA synthetase, alpha subunit | |||
| 1971 | conserved domain protein | |||
| 1972 | R | NmeMC58ORF1896P (100% identity) | GATC | Nme385ORF1972P |
| 1973 | leucyl-tRNA synthetase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 793 | L-lactate dehydrogenase | |||
| 794 | R | NmeMC58IP (100% identity) | CGYAG | Nme385ORF795P |
| 795 | M | M.NmeH44ORF1821P (100% identity) | CGYAG | M.Nme385ORF795P |
| 796 | tRNA pseudouridine synthase B | |||
| 902 | peptidylprolyl isomerase A | |||
| 903 | M | M.NmeMC58ORF1261P (98% identity) | M.Nme385ORF903P | |
| 904 | R | NmeMC58ORF1261P (100% identity) | Nme385ORF903P | |
| 905 | transposase, IS30 family | |||