Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. In press

REBASE ref # 12558

GenBank #: AEQE00000000

REBASE acronym: Nme99

Org_num: 6778

 

All begin NMBOX9930304_

Type I
ORF Gene Most similar Specificity Name
 
951 hypothetical protein
952 M M.NmeA710ORF1305P (100% identity) M.Nme99ORF952P
953 uracil-DNA glycosylase
 
1238 ATP-dependent Clp protease ATP-binding subunit
1239 R NmeA710ORF931P (91% identity) Nme99ORF1239P
1240 transposase for insertion sequence element
 
1242 S S.Ngo19853ORF11850P (71% identity) S.Nme99ORF1243P
1243 M M.NmeA710ORF931P (99% identity) M.Nme99ORF1243P
1244 ADP-glyceromanno-heptose 6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
78 S1 RNA binding domain protein
??? M M1.Nme4443ORF60P (100% identity) GGTGA M1.Nme99ORF79P
80 M UDP-glucose 4-epimerase GalE GGTGA M2.Nme99ORF79P
81 UDP-glucose 4-epimerase
 
574 76 aa hypothetical protein
575 M M.NmeA710ORF1828P (81% identity) GCGCGC M.Nme99ORF575P
576 R NmeS4ORFCP (100% identity) GCGCGC Nme99ORF575P
577 alanyl-tRNA synthetase
 
899 3-isopropylmalate dehydrogenase
900 R NmeMC58ORF1033P (100% identity) GGNNCC Nme99ORF901P
901 M M.NmeMC58ORF1033P (98% identity) GGNNCC M.Nme99ORF901P
902 3-isopropylmalate dehydratase, small subunit
 
861 ribonucleoside-diphosphate reductase, alpha
862 M M.NmeMC58ORF1290P (99% identity) CCWGG M.Nme99ORF862P
863 R NmeA710ORF1418P (100% identity) CCWGG Nme99ORF862P
864 ribonucleoside-diphosphate reductase, beta
 
1244 ADP-glyceromanno-heptose 6-epimerase
1245 R Nme8554ORF774P (100% identity) CCAGA Nme99ORF1246P
1246 M M.NmeMC58III (100% identity) CCAGA M.Nme99ORF1246P
1247 hldE bifunctional protein, domain I
 
1336 phenylalanyl-tRNA synthetase, beta subunit
1337 M M2.NmeMC58II (100% identity) GACGC M1.Nme99ORF1337P
1338 R NmeMC58IIP (99% identity) GACGC Nme99ORF1337P
1339 M M1.NmeMC58IIP (94% identity) GACGC M2.Nme99ORF1337P
1340 phenylalanyl-tRNA synthetase, alpha subunit
 
1717 R NmeBS847ORFAP (100% identity) GATC Nme99ORF1717P
1718 leucyl-tRNA synthetase
 
1826 ATP-dependent RNA helicase hrpA
1827 M M.NmeSI (100% identity) AGTACT M.Nme99ORF1827P
1828 R NmeSI (100% identity) AGTACT Nme99ORF1827P
??? C C.NmeW135ORF2552P (100% identity) C.Nme99ORF1827P
1829 IS1106 transposase
Type III
ORF Gene Most similar Specificity Name
 
776 L-lactate dehydrogenase
777 R Nme8249ORF1366P (97% identity) Nme99ORF778P
778 M M.Nme12176ORF5650P (97% identity) M.Nme99ORF778P
779 tRNA pseudouridine synthase B
 
887 peptidylprolyl isomerase A
888 M M.Nme13280ORF1991P (96% identity) M.Nme99ORF888P
889 R Nme9714ORF678P (100% identity) Nme99ORF888P
890 PP-loop family protein