Neisseria meningitidis OX99.30304 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria meningitidis OX99.30304 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. In press
REBASE ref # 12558
GenBank #: AEQE00000000
REBASE acronym: Nme99
Org_num: 6778
All begin NMBOX9930304_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 951 | hypothetical protein | |||
| 952 | M | M.NmeA710ORF1305P (100% identity) | M.Nme99ORF952P | |
| 953 | uracil-DNA glycosylase | |||
| 1238 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1239 | R | NmeA710ORF931P (91% identity) | Nme99ORF1239P | |
| 1240 | transposase for insertion sequence element | |||
| 1242 | S | S.Ngo9460ORF2075P (71% identity) | S.Nme99ORF1243P | |
| 1243 | M | M.NmeA710ORF931P (99% identity) | M.Nme99ORF1243P | |
| 1244 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 78 | S1 RNA binding domain protein | |||
| ??? | M | M1.Nme4443ORF60P (100% identity) | GGTGA | M1.Nme99ORF79P |
| 80 | M | UDP-glucose 4-epimerase GalE | GGTGA | M2.Nme99ORF79P |
| 81 | UDP-glucose 4-epimerase | |||
| 574 | 76 aa hypothetical protein | |||
| 575 | M | M.NmeA710ORF1828P (81% identity) | GCGCGC | M.Nme99ORF575P |
| 576 | R | NmeS4ORFCP (100% identity) | GCGCGC | Nme99ORF575P |
| 577 | alanyl-tRNA synthetase | |||
| 899 | 3-isopropylmalate dehydrogenase | |||
| 900 | R | NmeMC58ORF1033P (100% identity) | GGNNCC | Nme99ORF901P |
| 901 | M | M.NmeMC58ORF1033P (98% identity) | GGNNCC | M.Nme99ORF901P |
| 902 | 3-isopropylmalate dehydratase, small subunit | |||
| 861 | ribonucleoside-diphosphate reductase, alpha | |||
| 862 | M | M.NmeMC58ORF1290P (99% identity) | CCWGG | M.Nme99ORF862P |
| 863 | R | NmeA710ORF1418P (100% identity) | CCWGG | Nme99ORF862P |
| 864 | ribonucleoside-diphosphate reductase, beta | |||
| 1244 | ADP-glyceromanno-heptose 6-epimerase | |||
| 1245 | R | Nme8554ORF774P (100% identity) | CCAGA | Nme99ORF1246P |
| 1246 | M | M.NmeMC58III (100% identity) | CCAGA | M.Nme99ORF1246P |
| 1247 | hldE bifunctional protein, domain I | |||
| 1336 | phenylalanyl-tRNA synthetase, beta subunit | |||
| 1337 | M | M2.NmeMC58II (100% identity) | GACGC | M1.Nme99ORF1337P |
| 1338 | R | NmeMC58IIP (99% identity) | GACGC | Nme99ORF1337P |
| 1339 | M | M1.NmeMC58IIP (94% identity) | GACGC | M2.Nme99ORF1337P |
| 1340 | phenylalanyl-tRNA synthetase, alpha subunit | |||
| 1717 | R | NmeBS847ORFAP (100% identity) | GATC | Nme99ORF1717P |
| 1718 | leucyl-tRNA synthetase | |||
| 1826 | ATP-dependent RNA helicase hrpA | |||
| 1827 | M | M.NmeSI (100% identity) | AGTACT | M.Nme99ORF1827P |
| 1828 | R | NmeSI (100% identity) | AGTACT | Nme99ORF1827P |
| ??? | C | C.NmeW135ORF2552P (100% identity) | C.Nme99ORF1827P | |
| 1829 | IS1106 transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 776 | L-lactate dehydrogenase | |||
| 777 | R | Nme8249ORF1366P (97% identity) | Nme99ORF778P | |
| 778 | M | M.Nme12176ORF5650P (97% identity) | M.Nme99ORF778P | |
| 779 | tRNA pseudouridine synthase B | |||
| 887 | peptidylprolyl isomerase A | |||
| 888 | M | M.Nme13280ORF1991P (96% identity) | M.Nme99ORF888P | |
| 889 | R | Nme9714ORF678P (100% identity) | Nme99ORF888P | |
| 890 | PP-loop family protein | |||