Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. In press

REBASE ref # 12558

GenBank #: AEQD00000000

REBASE acronym: Nme1568

Org_num: 6777

 

All begin NMXN1568_

Type I
ORF Gene Most similar Specificity Name
 
953 hypothetical protein
??? M hypothetical protein M.Nme1568ORF954P
955 IS1106 transposase
 
956 M type I restriction-modification system DNA-methyltransferase M.Nme1568ORF956P
957 uracil-DNA glycosylase
 
1306 ATP-dependent Clp protease ATP-binding subunit
1307 R Nme22814ORFCP (81% identity) Nme1568ORF1307P
1308 transposase for insertion sequence element
 
1309 transposase for insertion sequence element
1310 R 128 aa hypothetical protein Nme1568ORF1314P
1311 380 aa hypothetical protein
1312 S S.NmeH44ORF1653P (100% identity) S.Nme1568ORF1314P
1313 336 aa hypothetical protein
1314 M M.NmeMC58ORF829P (99% identity) M.Nme1568ORF1314P
1315 ADP-glyceromanno-heptose 6-epimerase
Type II
ORF Gene Most similar Specificity Name
 
56 S1 RNA binding domain protein
57 M M1.NmeMC58ORF76P (100% identity) GGTGA M.Nme1568ORF57P
58 hypothetical protein
 
252 R 297 aa hypothetical protein CCTTC Nme1568ORF252P
253 IS1106 transposase
 
899 3-isopropylmalate dehydrogenase
900 R NmeMC58ORF1033P (100% identity) GGNNCC Nme1568ORF901P
901 M M.NmeMC58ORF1033P (100% identity) GGNNCC M.Nme1568ORF901P
902 3-isopropylmalate dehydratase, small subunit
 
1067 IS1106 transposase
1068 M M.Nme3683ORF1405P (99% identity) CCTTC M.Nme1568ORF1068P
1069 R 91 aa hypothetical protein CCTTC Nme1568ORF1068P
 
1315 ADP-glyceromanno-heptose 6-epimerase
1316 R Nme99ORF1246P (100% identity) CCAGA Nme1568ORF1317P
1317 M M.Nme24705ORF9520P (100% identity) CCAGA M.Nme1568ORF1317P
1318 hldE bifunctional protein, domain I
 
1411 phenylalanyl-tRNA synthetase, beta subunit
1412 M M2.NmeMC58II (100% identity) GACGC M.Nme1568ORF1412P
??? R NmeMC58IIP (71% identity) GACGC Nme1568ORF1412P
 
??? R NmeMC58IIP (19% identity) GACGC Nme1568ORF1414P
1414 M M1.NmeMC58IIP (100% identity) GACGC M.Nme1568ORF1414P
1415 phenylalanyl-tRNA synthetase, alpha subunit
 
1754 159 aa hypothetical protein
1755 M adenine-specific methyltransferase LlaDCHIB GATC M1.Nme1568ORF1755P
1756 M M2.Nme22814ORFLP (83% identity) GATC M2.Nme1568ORF1755P
1757 transposase, IS30 family
 
1874 ATP-dependent RNA helicase hrpA
1875 V V.Nme22814ORFKP (100% identity) V.Nme1568ORF1879P
1876 R 276 aa hypothetical protein NMA0428 CCGG Nme1568ORF1879AP
1877 insertion element transposase
1878 R Nme22814ORFKP (45% identity) CCGG Nme1568ORF1879BP
1879 M M.Nme8249ORF2194P (94% identity) CCGG M.Nme1568ORF1879P
1880 IS1106 transposase
Type III
ORF Gene Most similar Specificity Name
 
782 L-lactate dehydrogenase
783 R Nme22814ORFDP (100% identity) Nme1568ORF784P
784 M M.Nme44ORF843P (95% identity) M.Nme1568ORF784P
785 tRNA pseudouridine synthase B