Caldicellulosiruptor lactoaceticus 6A |
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Putative Caldicellulosiruptor lactoaceticus 6A RM systems
Ref: Lucas,S. et al. unpublished
REBASE ref # 12549
| Sequence length: | GenBank #: | |
| Chromosome: | 2,674,809 bp | CP003001 |
| Chromosome: | 2,625,442 bp | AEKD00000000 (NZ_AEKD00000000) |
REBASE acronym: Cla6A
Org_num: 6770
All begin Calla_, CallaDRAFT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1726 | protein of unknown function DUF45 | |||
| 1727 | R | Cla6AORF331P (100% identity) | Cla6AORF1732P | |
| 1728 | protein of unknown function DUF86 | |||
| 1729 | DNA polymerase beta domain protein region | |||
| 1730 | S | S.Cla6AORF331P (100% identity) | S.Cla6AORF1732P | |
| 1731 | pseudogene | |||
| 1732 | M | M.Cla6AORF331P (100% identity) | M.Cla6AORF1732P | |
| 1733 | 111 aa hypothetical protein | |||
| Chromosome | ||||
| 330 | 111 aa hypothetical protein | |||
| ??? | M | M.Cla6AORF1732P (100% identity) | M.Cla6AORF331P | |
| 333 | transcriptional regulator | |||
| 334 | S | S.Cla6AORF1732P (100% identity) | S.Cla6AORF331P | |
| 335 | DNA polymerase beta domain protein region | |||
| 336 | protein of unknown function DUF86 | |||
| 337 | R | Cla6AORF1732P (100% identity) | Cla6AORF331P | |
| 338 | protein of unknown function DUF45 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1007 | 141 aa hypothetical protein | |||
| 1008 | M | M.Cla6AORF1519P (100% identity) | GATC | M.Cla6AORF1008P |
| 1009 | 265 aa hypothetical protein | |||
| 1011 | helicase domain-containing protein | |||
| 1012 | M | M.Cla6AORF1515P (100% identity) | M.Cla6AORF1012P | |
| 1013 | 200 aa hypothetical protein | |||
| 1069 | 197 aa hypothetical protein | |||
| 1070 | M | M.Cla6AORF1764P (100% identity) | CCWGG | M.Cla6AORF1070P |
| 1071 | 267 aa hypothetical protein | |||
| Chromosome | ||||
| 1514 | 200 aa conserved hypothetical protein | |||
| 1515 | M | M.Cla6AORF1012P (100% identity) | M.Cla6AORF1515P | |
| 1516 | helicase domain protein | |||
| 1518 | 265 aa hypothetical protein | |||
| 1519 | M | M.Cla6AORF1008P (100% identity) | GATC | M.Cla6AORF1519P |
| 1520 | 94 aa conserved hypothetical protein | |||
| 1655 | 96 aa hypothetical protein | |||
| ??? | R | Zfok32ORFGP (54% identity) | Cla6AORF1656P | |
| 1659 | transcriptional regulator-like protein | |||
| 1763 | 267 aa conserved hypothetical protein | |||
| 1764 | M | M.Cla6AORF1070P (100% identity) | CCWGG | M.Cla6AORF1764P |
| 1765 | protein of unknown function DUF1130 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 299 | 97 aa hypothetical protein | |||
| 300 | M | M.Cla6AORF2353P (100% identity) | M.Cla6AORF300P | |
| 301 | R | Cla6AORF2353P (99% identity) | Cla6AORF300P | |
| 302 | integrase family protein | |||
| Chromosome | ||||
| 2350 | integrase family protein | |||
| ??? | R | Cla6AORF300P (99% identity) | Cla6AORF2353P | |
| 2353 | M | M.Cla6AORF300P (100% identity) | M.Cla6AORF2353P | |
| 2354 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2360 | Tryptophan synthase beta chain | |||
| 2361 | R | Cac7040ORF23P (52% identity) | Cla6AORF2359P | |
| 2362 | Methyltransferase type 11 | |||
| Chromosome | ||||
| 456 | methyltransferase type 11 | |||
| ??? | R | Cla6AORF2359P (82% identity) | Cla6AORF457P | |
| 460 | 41 aa hypothetical protein | |||
| 1300 | Methyltransferase type 11 | |||
| 1301 | R | Cla6AORF2359P (64% identity) | Cla6AORF1301P | |
| 1302 | pyridoxal-phosphate dependent TrpB-like enzyme | |||