Lactococcus lactis subsp. lactis CV56 |
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Putative Lactococcus lactis subsp. lactis CV56 RM systems
Ref: Gao,Y. et al. unpublished
REBASE ref # 12578
| Sequence length: | GenBank #: | |
| Chromosome: | 2,399,458 bp | CP002365 |
| plasmid pCV56A: | 44,098 bp | CP002366 |
| plasmid pCV56B: | 35,934 bp | CP002367 |
| plasmid pCV56C: | 31,442 bp | CP002368 |
REBASE acronym: LlaCV56
Org_num: 6793
All begin CVCAS_, CVCAS_pA, CVCAS_pB, CVCAS_pC
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 608 | 1408 aa conserved hypothetical protein | |||
| 609 | M | M.LlaGe001ORF1820P (100% identity) | M.LlaCV56ORF609P | |
| 610 | S | S.LlaGe001ORF1820P (100% identity) | S.LlaCV56ORF609P | |
| 611 | R | LlaGe001ORF1820P (92% identity) | LlaCV56ORF609P | |
| 612 | 408 aa conserved hypothetical protein | |||
| plasmid pCV56B | ||||
| 2 | replication-associated protein RepX | |||
| 3 | R | Lla895ORF713P (100% identity) | LlaCV56ORFB4P | |
| 4 | M | M.Lla895ORF713P (100% identity) | M.LlaCV56ORFB4P | |
| 5 | S | S.Lla895ORF713P (100% identity) | S.LlaCV56ORFB4P | |
| 6 | Mg2+ and Co2+ transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 989 | prophage protein | |||
| 990 | M | M.Lla7005ORF5055P (100% identity) | CTSAG | M.LlaCV56ORF990P |
| 991 | phage protein | |||
| 2127 | small terminase subunit | |||
| 2128 | M | M.Lla7005ORF10800P (100% identity) | M.LlaCV56ORF2128P | |
| 2129 | prophage protein | |||
| plasmid pCV56A | ||||
| 2 | 271 aa conserved hypothetical protein | |||
| 3 | M | M.Lla7005III (100% identity) | M.LlaCV56ORF3P | |
| 4 | type II restriction-modification system | |||
| 3 | type II restriction-modification system | |||
| 4 | RM | Lla7005ORF12405P (100% identity) | LlaCV56ORF4P | |
| 5 | 69 aa hypothetical protein | |||
| plasmid pCV56C | ||||
| 27 | 40 aa hypothetical protein | |||
| 28 | C | C.Lla7005IIP (100% identity) | C.LlaCV56ORF30P | |
| 29 | R | Lla7005IIP (100% identity) | CCWGG | LlaCV56ORF30P |
| 30 | adenine-specific DNA methylase | |||