Neisseria meningitidis H44/76 (UMaryland) |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Neisseria meningitidis H44/76 (UMaryland) RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. (2011) In press
REBASE ref # 12558
Complete sequence: 2,240,883 bp
GenBank #: CP002420
REBASE acronym: Nme44
Org_num: 6794
All begin NMBH4476_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 991 | 137 aa hypothetical protein | |||
| ??? | M | M.Nme21362ORF910P (100% identity) | M.Nme44ORFDP | |
| 993 | uracil-DNA glycosylase | |||
| 1350 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1351 | R | NmeMC58ORF829BP (100% identity) | Nme44ORF1357AP | |
| 1352 | transposase, IS30 family | |||
| 1353 | R | type I site-specific deoxyribonuclease, HsdR family protein | Nme44ORF1357BP | |
| 1354 | 380 aa hypothetical protein | |||
| 1355 | S | S.NmeH44ORF1653P (100% identity) | S.Nme44ORF1357P | |
| 1356 | 336 aa hypothetical protein | |||
| 1357 | M | M.NmeMC58ORF829P (99% identity) | M.Nme44ORF1357P | |
| 1358 | ADP-glyceromanno-heptose 6-epimerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 75 | S1 RNA binding domain protein | |||
| 76 | M | M1.NmeMC58ORF76P (100% identity) | GGTGA | M.Nme44ORF76P |
| 77 | hypothetical protein | |||
| 922 | ribonucleoside-diphosphate reductase, alpha | |||
| 923 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.Nme44ORF923P |
| 924 | R | type II restriction enzyme | CCWGG | Nme44ORF923P |
| 925 | ribonucleoside-diphosphate reductase, beta | |||
| 1135 | 3-isopropylmalate dehydratase, small subunit | |||
| 1136 | M | M.NmeH44ORF1488P (100% identity) | GGNNCC | M.Nme44ORF1136P |
| 1137 | R | NmeW135ORF659P (100% identity) | GGNNCC | Nme44ORF1136P |
| 1138 | 3-isopropylmalate dehydrogenase | |||
| 1358 | ADP-glyceromanno-heptose 6-epimerase | |||
| 1359 | R | NmeMC58IIIP (98% identity) | Nme44ORF1360P | |
| 1360 | M | M.NmeMC58III (98% identity) | CCAGA | M.Nme44ORF1360P |
| 1361 | hldE bifunctional protein, domain I | |||
| 1459 | phenylalanyl-tRNA synthetase, beta subunit | |||
| 1460 | M | M2.NmeMC58II (100% identity) | GACGC | M1.Nme44ORF1460P |
| 1461 | R | NmeMC58IIP (100% identity) | GACGC | Nme44ORF1460P |
| 1462 | M | M1.NmeMC58IIP (100% identity) | GACGC | M2.Nme44ORF1460P |
| 1463 | phenylalanyl-tRNA synthetase, alpha subunit | |||
| 1836 | 47 aa hypothetical protein NEILACOT_03814 | |||
| 1837 | R | NmeMC58ORF1896P (100% identity) | GATC | Nme44ORF1837P |
| 1838 | leucyl-tRNA synthetase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 841 | L-lactate dehydrogenase | |||
| 842 | R | NmeMC58IP (100% identity) | Nme44ORF843P | |
| 843 | M | M.NmeMC58I (99% identity) | M.Nme44ORF843P | |
| 844 | tRNA pseudouridine synthase B | |||
| 950 | peptidylprolyl isomerase A | |||
| ??? | M | M.Nme522ORF1012P (100% identity) | M.Nme44ORF951P | |
| 952 | R | NmeMC58ORF1261P (100% identity) | Nme44ORF951P | |
| 953 | transposase, IS30 family | |||