Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. (2011) In press

REBASE ref # 12591

Complete sequence: 2,248,966 bp

GenBank #: CP002424

REBASE acronym: Nme533

Org_num: 6806

 

All begin NMBNZ0533_

Type I
ORF Gene Most similar Specificity Name
 
875 ADP-glyceromanno-heptose 6-epimerase
876 M M.NmeA710ORF931P (100% identity) M.Nme533ORF876P
877 S S.Nme1ORF1263P (100% identity) S.Nme533ORF876P
878 R NmeA710ORF931P (100% identity) Nme533ORF876P
879 ATP-dependent Clp protease ATP-binding subunit
 
1187 uracil-DNA glycosylase
1188 M M.NmeA710ORF1305P (100% identity) M.Nme533ORF1188P
1189 137 aa hypothetical protein
Type II
ORF Gene Most similar Specificity Name
 
81 S1 RNA binding domain protein
??? M C-5 cytosine-specific DNA methylase M1.Nme533ORF82P
83 UDP-glucose 4-epimerase
 
310 transposase
??? C C.NmeW135ORF2552P (100% identity) C.Nme533ORF312P
311 R NmeSI (100% identity) AGTACT Nme533ORF312P
312 M M.NmeSI (100% identity) AGTACT M.Nme533ORF312P
313 ATP-dependent RNA helicase HrpA
 
433 pseudogene
434 R Nme8669ORF1877P (100% identity) GATC Nme533ORF434P
435 conserved domain protein
 
773 phenylalanyl-tRNA synthetase, alpha subunit
774 M M1.NmeMC58IIP (100% identity) GACGC M1.Nme533ORF774P
775 R NmeMC58IIP (100% identity) GACGC Nme533ORF774P
776 M M2.NmeMC58II (100% identity) GACGC M2.Nme533ORF774P
777 phenylalanyl-tRNA synthetase, beta subunit
 
872 hldE bifunctional protein, domain I
873 M M.NmeS4ORFEP (100% identity) CCAGA M.Nme533ORF873P
874 R NmeS4ORFEP (98% identity) CCAGA Nme533ORF873P
875 ADP-glyceromanno-heptose 6-epimerase
 
1241 3-isopropylmalate dehydratase, small subunit
1242 M M.NmeMC58ORF1033P (100% identity) GGNNCC M.Nme533ORF1242P
1243 R NmeMC58ORF1033P (100% identity) GGNNCC Nme533ORF1242P
1244 3-isopropylmalate dehydrogenase
 
1278 ribonucleoside-diphosphate reductase, beta
1279 R NmeMC58ORF1290P (100% identity) CCWGG Nme533ORF1280P
1280 M M.NmeMC58ORF1290P (100% identity) CCWGG M.Nme533ORF1280P
1281 ribonucleoside-diphosphate reductase, alpha
 
1574 alanyl-tRNA synthetase
1575 R Nme8669ORF1187P (100% identity) GCGCGC Nme533ORF1576P
1576 M M.NmeS4ORFCP (81% identity) GCGCGC M.Nme533ORF1576P
1577 76 aa hypothetical protein
Type III
ORF Gene Most similar Specificity Name
 
923 ribosomal protein L25, Ctc-form
924 M M.Nme8669ORF890P (100% identity) M.Nme533ORF924P
925 R Nme8669ORF890P (100% identity) Nme533ORF924P
926 serine-type D-Ala-D-Ala carboxypeptidase
 
1252 PP-loop family protein
1253 R Nme8669ORF1516P (100% identity) Nme533ORF1254P
1254 M M.Nme25419ORF6995P (96% identity) M.Nme533ORF1254P
1255 peptidylprolyl isomerase A
 
1361 tRNA pseudouridine synthase B
1362 M M.Nme8554ORF167P (98% identity) M.Nme533ORF1362P
1363 R Nme8669ORF1399P (100% identity) Nme533ORF1362P
1364 L-lactate dehydrogenase