Neisseria meningitidis NZ-05/33 |
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Putative Neisseria meningitidis NZ-05/33 RM systems
Ref: Budroni,S. et al. Proc. Natl. Acad. Sci. U.S.A. (2011) In press
REBASE ref # 12591
Complete sequence: 2,248,966 bp
GenBank #: CP002424
REBASE acronym: Nme533
Org_num: 6806
All begin NMBNZ0533_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 875 | ADP-glyceromanno-heptose 6-epimerase | |||
| 876 | M | M.NmeA710ORF931P (100% identity) | M.Nme533ORF876P | |
| 877 | S | S.Nme1ORF1263P (100% identity) | S.Nme533ORF876P | |
| 878 | R | NmeA710ORF931P (100% identity) | Nme533ORF876P | |
| 879 | ATP-dependent Clp protease ATP-binding subunit | |||
| 1187 | uracil-DNA glycosylase | |||
| 1188 | M | M.NmeA710ORF1305P (100% identity) | M.Nme533ORF1188P | |
| 1189 | 137 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 81 | S1 RNA binding domain protein | |||
| ??? | M | M.NmeW135ORF2120P (100% identity) | M1.Nme533ORF82P | |
| 83 | UDP-glucose 4-epimerase | |||
| 310 | transposase | |||
| ??? | C | C.NmeW135ORF2552P (100% identity) | C.Nme533ORF312P | |
| 311 | R | NmeSI (100% identity) | AGTACT | Nme533ORF312P |
| 312 | M | M.NmeSI (100% identity) | AGTACT | M.Nme533ORF312P |
| 313 | ATP-dependent RNA helicase HrpA | |||
| 433 | pseudogene | |||
| 434 | R | Nme8669ORF1877P (100% identity) | GATC | Nme533ORF434P |
| 435 | conserved domain protein | |||
| 773 | phenylalanyl-tRNA synthetase, alpha subunit | |||
| 774 | M | M1.NmeMC58IIP (100% identity) | GACGC | M1.Nme533ORF774P |
| 775 | R | NmeMC58IIP (100% identity) | GACGC | Nme533ORF774P |
| 776 | M | M2.NmeMC58II (100% identity) | GACGC | M2.Nme533ORF774P |
| 777 | phenylalanyl-tRNA synthetase, beta subunit | |||
| 872 | hldE bifunctional protein, domain I | |||
| 873 | M | M.NmeS4ORFEP (100% identity) | CCAGA | M.Nme533ORF873P |
| 874 | R | NmeS4ORFEP (98% identity) | CCAGA | Nme533ORF873P |
| 875 | ADP-glyceromanno-heptose 6-epimerase | |||
| 1241 | 3-isopropylmalate dehydratase, small subunit | |||
| 1242 | M | M.NmeMC58ORF1033P (100% identity) | GGNNCC | M.Nme533ORF1242P |
| 1243 | R | NmeMC58ORF1033P (100% identity) | GGNNCC | Nme533ORF1242P |
| 1244 | 3-isopropylmalate dehydrogenase | |||
| 1278 | ribonucleoside-diphosphate reductase, beta | |||
| 1279 | R | NmeMC58ORF1290P (100% identity) | CCWGG | Nme533ORF1280P |
| 1280 | M | M.NmeMC58ORF1290P (100% identity) | CCWGG | M.Nme533ORF1280P |
| 1281 | ribonucleoside-diphosphate reductase, alpha | |||
| 1574 | alanyl-tRNA synthetase | |||
| 1575 | R | Nme8669ORF1187P (100% identity) | GCGCGC | Nme533ORF1576P |
| 1576 | M | M.NmeS4ORFCP (81% identity) | GCGCGC | M.Nme533ORF1576P |
| 1577 | 76 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 923 | ribosomal protein L25, Ctc-form | |||
| 924 | M | M.Nme8669ORF890P (100% identity) | M.Nme533ORF924P | |
| 925 | R | Nme8669ORF890P (100% identity) | Nme533ORF924P | |
| 926 | serine-type D-Ala-D-Ala carboxypeptidase | |||
| 1252 | PP-loop family protein | |||
| 1253 | R | Nme8669ORF1516P (100% identity) | Nme533ORF1254P | |
| 1254 | M | M.Nme25419ORF6995P (96% identity) | M.Nme533ORF1254P | |
| 1255 | peptidylprolyl isomerase A | |||
| 1361 | tRNA pseudouridine synthase B | |||
| 1362 | M | M.Nme8554ORF167P (98% identity) | M.Nme533ORF1362P | |
| 1363 | R | Nme8669ORF1399P (100% identity) | Nme533ORF1362P | |
| 1364 | L-lactate dehydrogenase | |||